Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:05:53 (3889): wrapper (7.7.26015): starting
02:05:53 (3889): wrapper: running run_atlas (--nthreads 4)
[2026-05-15 02:05:53] Arguments: --nthreads 4
[2026-05-15 02:05:53] Threads: 4
[2026-05-15 02:05:53] Checking for CVMFS
[2026-05-15 02:06:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-15 02:07:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-15 02:07:00] Running cvmfs_config stat atlas.cern.ch
[2026-05-15 02:07:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-15 02:07:00] 2.11.5.0 4123 1 25472 159516 3 1 2446487 4194305 0 130560 0 0 0.000 1283 144 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-05-15 02:07:00] CVMFS is ok
[2026-05-15 02:07:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-15 02:07:00] Checking for apptainer binary...
[2026-05-15 02:07:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-15 02:07:00] Running /usr/bin/apptainer --version
[2026-05-15 02:07:01] apptainer version 1.0.3
[2026-05-15 02:07:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-15 02:07:02] TeeC20
[2026-05-15 02:07:02] apptainer works
[2026-05-15 02:07:02] Set ATHENA_PROC_NUMBER=4
[2026-05-15 02:07:02] Set ATHENA_CORE_NUMBER=4
[2026-05-15 02:07:02] Starting ATLAS job with PandaID=7138269886
[2026-05-15 02:07:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-15 02:12:29]  *** The last 200 lines of the pilot log: ***
[2026-05-15 02:12:29] 2026-05-15 01:11:26,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | WARNING  | found no stored workdir sizes
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | WARNING  | wrong length of table data, x=[1778807324.0], y=[13524.0] (must be same and length>=4)
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | INFO     | could have reported an average CPU frequency of 3429 MHz (4 samples)
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | INFO     | ..............................
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . Timing measurements:
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . get job = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . initial setup = 25 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . payload setup = 5 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . stage-in = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . payload execution = 43 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . stage-out = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . log creation = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | ..............................
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 02:12:29] 2026-05-15 01:11:26,978 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138269886/pilotlog.txt
[2026-05-15 02:12:29] 2026-05-15 01:11:26,985 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-15 02:12:29] - Log from pilotlog.txt -
[2026-05-15 02:12:29] 2026-05-15 01:11:26,975 | INFO     | extracted standard info from prmon json
[2026-05-15 02:12:29] 2026-05-15 01:11:26,975 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 02:12:29] 2026-05-15 01:11:26,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 02:12:29] 2026-05-15 01:11:26,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | WARNING  | found no stored workdir sizes
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | WARNING  | wrong length of table data, x=[1778807324.0], y=[13524.0] (must be same and length>=4)
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | INFO     | could have reported an average CPU frequency of 3429 MHz (4 samples)
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | INFO     | ..............................
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . Timing measurements:
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . get job = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . initial setup = 25 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . payload setup = 5 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . stage-in = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . payload execution = 43 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . stage-out = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . log creation = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | ..............................
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 02:12:29] 2026-05-15 01:11:26,978 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138269886/pilotlog.txt
[2026-05-15 02:12:29] 2026-05-15 01:11:26,986 | WARNING  | 
[2026-05-15 02:12:29] [begin log extracts]
[2026-05-15 02:12:29] - Log from pilotlog.txt -
[2026-05-15 02:12:29] 2026-05-15 01:11:26,975 | INFO     | extracted standard info from prmon json
[2026-05-15 02:12:29] 2026-05-15 01:11:26,975 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 02:12:29] 2026-05-15 01:11:26,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 02:12:29] 2026-05-15 01:11:26,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | WARNING  | found no stored workdir sizes
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | WARNING  | wrong length of table data, x=[1778807324.0], y=[13524.0] (must be same and length>=4)
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | INFO     | could have reported an average CPU frequency of 3429 MHz (4 samples)
[2026-05-15 02:12:29] 2026-05-15 01:11:26,976 | INFO     | ..............................
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . Timing measurements:
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . get job = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . initial setup = 25 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . payload setup = 5 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . stage-in = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . payload execution = 43 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . stage-out = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | . log creation = 0 s
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | ..............................
[2026-05-15 02:12:29] 2026-05-15 01:11:26,977 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 02:12:29] 2026-05-15 01:11:26,978 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138269886/pilotlog.txt
[2026-05-15 02:12:29] [end log extracts]
[2026-05-15 02:12:29] 2026-05-15 01:11:26,986 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-15 02:12:29] 2026-05-15 01:11:26,986 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | 
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | job summary report
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | --------------------------------------------------
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | PanDA job id: 7138269886
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | task id: 50250204
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-15 02:09:21,242 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | pilot state: failed 
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | transexitcode: 65
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | exeerrorcode: 65
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | exitcode: 65
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | cpuconsumptiontime: 12 s
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | nevents: 0
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | neventsw: 0
[2026-05-15 02:12:29] 2026-05-15 01:11:27,029 | INFO     | pid: 12620
[2026-05-15 02:12:29] 2026-05-15 01:11:27,030 | INFO     | pgrp: 12620
[2026-05-15 02:12:29] 2026-05-15 01:11:27,030 | INFO     | corecount: 4
[2026-05-15 02:12:29] 2026-05-15 01:11:27,030 | INFO     | event service: False
[2026-05-15 02:12:29] 2026-05-15 01:11:27,030 | INFO     | sizes: {0: 2267501, 10: 2267501, 53: 2294981, 55: 2294981, 172: 2295147}
[2026-05-15 02:12:29] 2026-05-15 01:11:27,030 | INFO     | --------------------------------------------------
[2026-05-15 02:12:29] 2026-05-15 01:11:27,030 | INFO     | 
[2026-05-15 02:12:29] 2026-05-15 01:11:27,030 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2026-05-15 02:12:29] 2026-05-15 01:11:27,037 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,037 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,037 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,037 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | job 7138269886 has completed (purged errors)
[2026-05-15 02:12:29] 2026-05-15 01:11:27,038 | INFO     | overall cleanup function is called
[2026-05-15 02:12:29] 2026-05-15 01:11:28,043 | INFO     | --- collectZombieJob: --- 10, [12620]
[2026-05-15 02:12:29] 2026-05-15 01:11:28,043 | INFO     | zombie collector waiting for pid 12620
[2026-05-15 02:12:29] 2026-05-15 01:11:28,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-15 02:12:29] 2026-05-15 01:11:28,043 | INFO     | collected zombie processes
[2026-05-15 02:12:29] 2026-05-15 01:11:28,044 | INFO     | will attempt to kill all subprocesses of pid=12620
[2026-05-15 02:12:29] 2026-05-15 01:11:28,086 | INFO     | process IDs to be killed: [12620] (in reverse order)
[2026-05-15 02:12:29] 2026-05-15 01:11:28,105 | WARNING  | found no corresponding commands to process id(s)
[2026-05-15 02:12:29] 2026-05-15 01:11:28,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-15 02:12:29] 2026-05-15 01:11:28,107 | INFO     | did not find any defunct processes belonging to 12620
[2026-05-15 02:12:29] 2026-05-15 01:11:28,108 | INFO     | did not find any defunct processes belonging to 12620
[2026-05-15 02:12:29] 2026-05-15 01:11:28,108 | INFO     | Ready for new job
[2026-05-15 02:12:29] 2026-05-15 01:11:28,108 | INFO     | ***************************************
[2026-05-15 02:12:29] 2026-05-15 01:11:28,109 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-15 02:12:29] 2026-05-15 01:11:28,109 | INFO     | ***************************************
[2026-05-15 02:12:29] 2026-05-15 01:11:28,109 | INFO     | 
[2026-05-15 02:12:29] 2026-05-15 01:11:28,126 | INFO     | architecture information:
[2026-05-15 02:12:29] 2026-05-15 01:11:28,126 | INFO     | executing command: cat /etc/os-release
[2026-05-15 02:12:29] 2026-05-15 01:11:28,134 | INFO     | cat /etc/os-release:
[2026-05-15 02:12:29] NAME="CentOS Linux"
[2026-05-15 02:12:29] VERSION="7 (Core)"
[2026-05-15 02:12:29] ID="centos"
[2026-05-15 02:12:29] ID_LIKE="rhel fedora"
[2026-05-15 02:12:29] VERSION_ID="7"
[2026-05-15 02:12:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-15 02:12:29] ANSI_COLOR="0;31"
[2026-05-15 02:12:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-15 02:12:29] HOME_URL="https://www.centos.org/"
[2026-05-15 02:12:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-15 02:12:29] 
[2026-05-15 02:12:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-15 02:12:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-15 02:12:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-15 02:12:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-15 02:12:29] 
[2026-05-15 02:12:29] 2026-05-15 01:11:28,135 | INFO     | ***************************************
[2026-05-15 02:12:29] 2026-05-15 01:11:28,638 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2026-05-15 02:12:29] 2026-05-15 01:11:28,650 | INFO     | sufficient remaining disk space (419263676416 B)
[2026-05-15 02:12:29] 2026-05-15 01:11:28,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-15 02:12:29] 2026-05-15 01:11:28,650 | INFO     | current server update state: UPDATING_FINAL
[2026-05-15 02:12:29] 2026-05-15 01:11:28,650 | INFO     | update_server=False
[2026-05-15 02:12:29] 2026-05-15 01:11:28,650 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-15 02:12:29] 2026-05-15 01:11:28,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-15 02:12:29] 2026-05-15 01:11:28,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-15 02:12:29] 2026-05-15 01:11:28,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-15 02:12:29] 2026-05-15 01:11:29,043 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-15 02:12:29] 2026-05-15 01:11:29,044 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-15 02:12:29] 2026-05-15 01:11:29,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-15 02:12:29] 2026-05-15 01:11:29,044 | INFO     | will abort loop
[2026-05-15 02:12:29] 2026-05-15 01:11:29,261 | INFO     | all payload control threads have been joined
[2026-05-15 02:12:29] 2026-05-15 01:11:29,553 | INFO     | all data control threads have been joined
[2026-05-15 02:12:29] 2026-05-15 01:11:29,656 | INFO     | [job] retrieve thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:29,657 | INFO     | [job] queue monitor thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,050 | INFO     | [job] job monitor thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,116 | INFO     | all job control threads have been joined
[2026-05-15 02:12:29] 2026-05-15 01:11:30,267 | INFO     | [payload] control thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,279 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,429 | INFO     | [payload] execute_payloads thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,450 | INFO     | [job] validate thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,559 | INFO     | [data] control thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,574 | INFO     | [job] create_data_payload thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,594 | INFO     | [payload] failed_post thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,652 | INFO     | [payload] validate_pre thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,792 | INFO     | [data] copytool_in thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,825 | INFO     | [data] copytool_out thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:30,923 | INFO     | [payload] validate_post thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:31,121 | INFO     | [job] control thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:32,657 | INFO     | [data] queue_monitor thread has finished
[2026-05-15 02:12:29] 2026-05-15 01:11:58,969 | INFO     | PID=8220 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-15 02:12:29] 2026-05-15 01:11:58,969 | INFO     | found 0 job(s) in 20 queues
[2026-05-15 02:12:29] 2026-05-15 01:11:58,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-15 02:12:29] 2026-05-15 01:11:58,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-15 02:12:29] 2026-05-15 01:12:24,281 | INFO     | [monitor] cgroup control has ended
[2026-05-15 02:12:29] 2026-05-15 01:12:24,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139948254451520)>', '<ExcThread(monitor, started 139947784779520)>']
[2026-05-15 02:12:29] 2026-05-15 01:12:25,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-15 02:12:29] 2026-05-15 01:12:25,099 | INFO     | [monitor] control thread has ended
[2026-05-15 02:12:29] 2026-05-15 01:12:29,307 | INFO     | all workflow threads have been joined
[2026-05-15 02:12:29] 2026-05-15 01:12:29,307 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-15 02:12:29] 2026-05-15 01:12:29,308 | INFO     | traces error code: 0
[2026-05-15 02:12:29] 2026-05-15 01:12:29,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-15 02:12:29] 2026-05-15 01:12:29,376 [wrapper] ==== pilot stdout END ====
[2026-05-15 02:12:29] 2026-05-15 01:12:29,377 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-15 02:12:29] 2026-05-15 01:12:29,378 [wrapper] pilotpid: 8220
[2026-05-15 02:12:29] 2026-05-15 01:12:29,379 [wrapper] Pilot exit status: 0
[2026-05-15 02:12:29] 2026-05-15 01:12:29,411 [wrapper] pandaids: 7138269886
[2026-05-15 02:12:29] 2026-05-15 01:12:29,421 [wrapper] cleanup supervisor_pilot  8226 8221
[2026-05-15 02:12:29] 2026-05-15 01:12:29,422 [wrapper] Test setup, not cleaning
[2026-05-15 02:12:29] 2026-05-15 01:12:29,423 [wrapper] apfmon messages muted
[2026-05-15 02:12:29] 2026-05-15 01:12:29,424 [wrapper] ==== wrapper stdout END ====
[2026-05-15 02:12:29] 2026-05-15 01:12:29,425 [wrapper] ==== wrapper stderr END ====
[2026-05-15 02:12:29]  *** Error codes and diagnostics ***
[2026-05-15 02:12:29]     "exeErrorCode": 65,
[2026-05-15 02:12:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 02:12:29]     "pilotErrorCode": 1305,
[2026-05-15 02:12:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 02:12:29]  *** Listing of results directory ***
[2026-05-15 02:12:29] total 265784
[2026-05-15 02:12:29] -rwx------ 1 m m     36281 May 14 07:46 runpilot2-wrapper.sh
[2026-05-15 02:12:29] -rw-r--r-- 1 m m    683926 May 14 13:40 pilot3.tar.gz
[2026-05-15 02:12:29] -rw-r--r-- 1 m m      5631 May 14 15:56 queuedata.json
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m       100 May 15 02:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-15 02:12:29] -rwxr-xr-x 1 m m      7986 May 15 02:05 run_atlas
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m       105 May 15 02:05 job.xml
[2026-05-15 02:12:29] -rw-r--r-- 2 m m     15667 May 15 02:05 start_atlas.sh
[2026-05-15 02:12:29] drwxrwx--x 2 m m      4096 May 15 02:05 shared
[2026-05-15 02:12:29] -rw-r--r-- 2 m m    697448 May 15 02:05 input.tar.gz
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m      5795 May 15 02:05 init_data.xml
[2026-05-15 02:12:29] -rw-r--r-- 2 m m 267857875 May 15 02:05 EVNT.50238180._000061.pool.root.1
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m         0 May 15 02:05 boinc_lockfile
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m      2562 May 15 02:07 pandaJob.out
[2026-05-15 02:12:29] -rw------- 1 m m    993483 May 15 02:07 agis_schedconf.cvmfs.json
[2026-05-15 02:12:29] -rw------- 1 m m   1502367 May 15 02:08 agis_ddmendpoints.agis.ALL.json
[2026-05-15 02:12:29] -rw------- 1 m m       424 May 15 02:08 workernode_map.json
[2026-05-15 02:12:29] drwx------ 5 m m      4096 May 15 02:08 pilot3
[2026-05-15 02:12:29] -rw------- 1 m m       950 May 15 02:09 memory_monitor_summary.json
[2026-05-15 02:12:29] -rw------- 1 m m     21067 May 15 02:09 log.50250204._001504.job.log.tgz.1
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m       481 May 15 02:09 boinc_task_state.xml
[2026-05-15 02:12:29] -rw------- 1 m m        95 May 15 02:11 pilot_heartbeat.json
[2026-05-15 02:12:29] -rw------- 1 m m      6997 May 15 02:11 heartbeat_new.json
[2026-05-15 02:12:29] -rw------- 1 m m      6959 May 15 02:11 heartbeat.json
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m      8192 May 15 02:12 boinc_mmap_file
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m        22 May 15 02:12 wrapper_checkpoint.txt
[2026-05-15 02:12:29] -rw------- 1 m m      4930 May 15 02:12 pilotlog.txt
[2026-05-15 02:12:29] -rw------- 1 m m     75726 May 15 02:12 log.50250204._001504.job.log.1
[2026-05-15 02:12:29] -rw------- 1 m m       188 May 15 02:12 output.list
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m       410 May 15 02:12 runtime_log
[2026-05-15 02:12:29] -rw------- 1 m m    112640 May 15 02:12 result.tar.gz
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m      8198 May 15 02:12 runtime_log.err
[2026-05-15 02:12:29] -rw------- 1 m m       627 May 15 02:12 6fdc154cb17f.diag
[2026-05-15 02:12:29] -rw-rw-r-- 1 m m     21257 May 15 02:12 stderr.txt
[2026-05-15 02:12:29] No HITS result produced
[2026-05-15 02:12:29]  *** Contents of shared directory: ***
[2026-05-15 02:12:29] total 262392
[2026-05-15 02:12:29] -rw-r--r-- 2 m m     15667 May 15 02:05 start_atlas.sh
[2026-05-15 02:12:29] -rw-r--r-- 2 m m    697448 May 15 02:05 input.tar.gz
[2026-05-15 02:12:29] -rw-r--r-- 2 m m 267857875 May 15 02:05 ATLAS.root_0
[2026-05-15 02:12:29] -rw------- 1 m m    112640 May 15 02:12 result.tar.gz
02:12:31 (3889): run_atlas exited; CPU time 17.033076
02:12:31 (3889): called boinc_finish(0)

</stderr_txt>
]]>

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