Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:16:42 (27027): wrapper (7.7.26015): starting
16:16:42 (27027): wrapper: running run_atlas (--nthreads 8)
[2026-05-14 16:16:42] Arguments: --nthreads 8
[2026-05-14 16:16:42] Threads: 8
[2026-05-14 16:16:42] Checking for CVMFS
[2026-05-14 16:16:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 16:16:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 16:16:43] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 16:16:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 16:16:43] 2.11.2.0 3869 347222 152980 159515 1 188 9788391 18432001 29 130560 0 215159939 99.988 11962973 25527 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-14 16:16:43] CVMFS is ok
[2026-05-14 16:16:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 16:16:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 16:16:43] Further information can be found at the LHC@home message board.
[2026-05-14 16:16:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 16:16:43] Checking for apptainer binary...
[2026-05-14 16:16:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 16:16:43] Running /usr/bin/apptainer --version
[2026-05-14 16:16:43] apptainer version 1.3.2-1.el7
[2026-05-14 16:16:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 16:16:43] c-206-12.aglt2.org
[2026-05-14 16:16:43] apptainer works
[2026-05-14 16:16:43] Set ATHENA_PROC_NUMBER=8
[2026-05-14 16:16:43] Set ATHENA_CORE_NUMBER=8
[2026-05-14 16:16:43] Starting ATLAS job with PandaID=7138291792
[2026-05-14 16:16:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 18:47:21]  *** The last 200 lines of the pilot log: ***
[2026-05-14 18:47:21] 2026-05-14 22:46:36,886 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 18:47:21] 2026-05-14 22:46:36,886 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 18:47:21] 2026-05-14 22:46:36,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 18:47:21] 2026-05-14 22:46:36,891 | INFO     | fitting pss+swap vs Time
[2026-05-14 18:47:21] 2026-05-14 22:46:36,891 | INFO     | sum of square deviations: 984941258.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,893 | INFO     | sum of deviations: 28226209384.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,893 | INFO     | mean x (centered): 0.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,893 | INFO     | mean y: 2547737.292517007
[2026-05-14 18:47:21] 2026-05-14 22:46:36,893 | INFO     | intersect: 2547737.292517007
[2026-05-14 18:47:21] 2026-05-14 22:46:36,894 | INFO     | chi2: 1.2942340384581568
[2026-05-14 18:47:21] 2026-05-14 22:46:36,894 | INFO     | sum of square deviations: 887813855.5
[2026-05-14 18:47:21] 2026-05-14 22:46:36,895 | INFO     | sum of deviations: 27125561526.5
[2026-05-14 18:47:21] 2026-05-14 22:46:36,895 | INFO     | mean x (centered): 0.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,895 | INFO     | mean y: 2546008.5
[2026-05-14 18:47:21] 2026-05-14 22:46:36,896 | INFO     | intersect: 2546008.5
[2026-05-14 18:47:21] 2026-05-14 22:46:36,896 | INFO     | chi2: 1.294250969183886
[2026-05-14 18:47:21] 2026-05-14 22:46:36,896 | INFO     | current chi2=1.294250969183886 (change=-0.0013081656969352623 %)
[2026-05-14 18:47:21] 2026-05-14 22:46:36,896 | INFO     | right removable region: 141
[2026-05-14 18:47:21] 2026-05-14 22:46:36,897 | INFO     | sum of square deviations: 887813855.5
[2026-05-14 18:47:21] 2026-05-14 22:46:36,898 | INFO     | sum of deviations: 5747291198.500002
[2026-05-14 18:47:21] 2026-05-14 22:46:36,898 | INFO     | mean x (centered): 0.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,898 | INFO     | mean y: 2582557.091549296
[2026-05-14 18:47:21] 2026-05-14 22:46:36,898 | INFO     | intersect: 2582557.091549296
[2026-05-14 18:47:21] 2026-05-14 22:46:36,899 | INFO     | chi2: 0.0028371226932901094
[2026-05-14 18:47:21] 2026-05-14 22:46:36,899 | INFO     | current chi2=0.0028371226932901094 (change=99.78078750759252 %)
[2026-05-14 18:47:21] 2026-05-14 22:46:36,899 | INFO     | sum of square deviations: 797291228.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,900 | INFO     | sum of deviations: 4147941317.9999995
[2026-05-14 18:47:21] 2026-05-14 22:46:36,900 | INFO     | mean x (centered): 0.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,901 | INFO     | mean y: 2585241.722627737
[2026-05-14 18:47:21] 2026-05-14 22:46:36,901 | INFO     | intersect: 2585241.722627737
[2026-05-14 18:47:21] 2026-05-14 22:46:36,901 | INFO     | chi2: 0.0007655376555507599
[2026-05-14 18:47:21] 2026-05-14 22:46:36,901 | INFO     | current chi2=0.0007655376555507599 (change=73.01711140793164 %)
[2026-05-14 18:47:21] 2026-05-14 22:46:36,902 | INFO     | sum of square deviations: 713140813.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,903 | INFO     | sum of deviations: 3364489373.500004
[2026-05-14 18:47:21] 2026-05-14 22:46:36,903 | INFO     | mean x (centered): 0.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,903 | INFO     | mean y: 2586658.553030303
[2026-05-14 18:47:21] 2026-05-14 22:46:36,903 | INFO     | intersect: 2586658.553030303
[2026-05-14 18:47:21] 2026-05-14 22:46:36,904 | INFO     | chi2: 0.000514480282585472
[2026-05-14 18:47:21] 2026-05-14 22:46:36,904 | INFO     | current chi2=0.000514480282585472 (change=32.79490840782569 %)
[2026-05-14 18:47:21] 2026-05-14 22:46:36,904 | INFO     | sum of square deviations: 635130048.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,905 | INFO     | sum of deviations: 2826801548.999999
[2026-05-14 18:47:21] 2026-05-14 22:46:36,905 | INFO     | mean x (centered): 0.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,905 | INFO     | mean y: 2587708.448818898
[2026-05-14 18:47:21] 2026-05-14 22:46:36,906 | INFO     | intersect: 2587708.448818898
[2026-05-14 18:47:21] 2026-05-14 22:46:36,906 | INFO     | chi2: 0.00045025982344781395
[2026-05-14 18:47:21] 2026-05-14 22:46:36,906 | INFO     | current chi2=0.00045025982344781395 (change=12.482588995427434 %)
[2026-05-14 18:47:21] 2026-05-14 22:46:36,906 | INFO     | left removable region: 20
[2026-05-14 18:47:21] 2026-05-14 22:46:36,907 | INFO     | sum of square deviations: 549294020.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,908 | INFO     | sum of deviations: 2614691372.9999995
[2026-05-14 18:47:21] 2026-05-14 22:46:36,908 | INFO     | mean x (centered): 0.0
[2026-05-14 18:47:21] 2026-05-14 22:46:36,908 | INFO     | mean y: 2587255.8925619833
[2026-05-14 18:47:21] 2026-05-14 22:46:36,908 | INFO     | intersect: 2587255.8925619833
[2026-05-14 18:47:21] 2026-05-14 22:46:36,908 | INFO     | chi2: 0.00039204909101886427
[2026-05-14 18:47:21] 2026-05-14 22:46:36,909 | INFO     | current memory leak: 4.76 B/s (using 121 data points, chi2=0.00)
[2026-05-14 18:47:21] 2026-05-14 22:46:36,909 | INFO     | could have reported an average CPU frequency of 1717 MHz (8 samples)
[2026-05-14 18:47:21] 2026-05-14 22:46:36,909 | INFO     | ..............................
[2026-05-14 18:47:21] 2026-05-14 22:46:36,910 | INFO     | . Timing measurements:
[2026-05-14 18:47:21] 2026-05-14 22:46:36,910 | INFO     | . get job = 0 s
[2026-05-14 18:47:21] 2026-05-14 22:46:36,910 | INFO     | . initial setup = 6 s
[2026-05-14 18:47:21] 2026-05-14 22:46:36,910 | INFO     | . payload setup = 11 s
[2026-05-14 18:47:21] 2026-05-14 22:46:36,910 | INFO     | . stage-in = 0 s
[2026-05-14 18:47:21] 2026-05-14 22:46:36,910 | INFO     | . payload execution = 8943 s
[2026-05-14 18:47:21] 2026-05-14 22:46:36,911 | INFO     | . stage-out = 0 s
[2026-05-14 18:47:21] 2026-05-14 22:46:36,911 | INFO     | . log creation = 0 s
[2026-05-14 18:47:21] 2026-05-14 22:46:36,911 | INFO     | ..............................
[2026-05-14 18:47:21] 2026-05-14 22:46:37,061 | INFO     | 
[2026-05-14 18:47:21] 2026-05-14 22:46:37,062 | INFO     | job summary report
[2026-05-14 18:47:21] 2026-05-14 22:46:37,062 | INFO     | --------------------------------------------------
[2026-05-14 18:47:21] 2026-05-14 22:46:37,062 | INFO     | PanDA job id: 7138291792
[2026-05-14 18:47:21] 2026-05-14 22:46:37,062 | INFO     | task id: 50087155
[2026-05-14 18:47:21] 2026-05-14 22:46:37,062 | INFO     | errors: (none)
[2026-05-14 18:47:21] 2026-05-14 22:46:37,063 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 18:47:21] 2026-05-14 22:46:37,063 | INFO     | pilot state: finished 
[2026-05-14 18:47:21] 2026-05-14 22:46:37,063 | INFO     | transexitcode: 0
[2026-05-14 18:47:21] 2026-05-14 22:46:37,063 | INFO     | exeerrorcode: 0
[2026-05-14 18:47:21] 2026-05-14 22:46:37,063 | INFO     | exeerrordiag: 
[2026-05-14 18:47:21] 2026-05-14 22:46:37,063 | INFO     | exitcode: 0
[2026-05-14 18:47:21] 2026-05-14 22:46:37,064 | INFO     | exitmsg: OK
[2026-05-14 18:47:21] 2026-05-14 22:46:37,064 | INFO     | cpuconsumptiontime: 67038 s
[2026-05-14 18:47:21] 2026-05-14 22:46:37,064 | INFO     | nevents: 400
[2026-05-14 18:47:21] 2026-05-14 22:46:37,064 | INFO     | neventsw: 0
[2026-05-14 18:47:21] 2026-05-14 22:46:37,064 | INFO     | pid: 18424
[2026-05-14 18:47:21] 2026-05-14 22:46:37,064 | INFO     | pgrp: 18424
[2026-05-14 18:47:21] 2026-05-14 22:46:37,065 | INFO     | corecount: 8
[2026-05-14 18:47:21] 2026-05-14 22:46:37,065 | INFO     | event service: False
[2026-05-14 18:47:21] 2026-05-14 22:46:37,065 | INFO     | sizes: {0: 2265642, 1: 2267527, 12: 2267527, 8957: 2295756, 8958: 2295755, 8959: 2304809, 8962: 2304993, 8964: 2305187}
[2026-05-14 18:47:21] 2026-05-14 22:46:37,065 | INFO     | --------------------------------------------------
[2026-05-14 18:47:21] 2026-05-14 22:46:37,065 | INFO     | 
[2026-05-14 18:47:21] 2026-05-14 22:46:37,066 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-05-14 18:47:21] 2026-05-14 22:46:37,086 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,089 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,089 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,089 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,089 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,089 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,089 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,089 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,089 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,090 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 18:47:21] 2026-05-14 22:46:37,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,091 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 18:47:21] 2026-05-14 22:46:37,091 | INFO     | job 7138291792 has completed (purged errors)
[2026-05-14 18:47:21] 2026-05-14 22:46:37,091 | INFO     | overall cleanup function is called
[2026-05-14 18:47:21] 2026-05-14 22:46:38,098 | INFO     | --- collectZombieJob: --- 10, [18424]
[2026-05-14 18:47:21] 2026-05-14 22:46:38,099 | INFO     | zombie collector waiting for pid 18424
[2026-05-14 18:47:21] 2026-05-14 22:46:38,099 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 18:47:21] 2026-05-14 22:46:38,099 | INFO     | collected zombie processes
[2026-05-14 18:47:21] 2026-05-14 22:46:38,099 | INFO     | will attempt to kill all subprocesses of pid=18424
[2026-05-14 18:47:21] 2026-05-14 22:46:38,245 | INFO     | process IDs to be killed: [18424] (in reverse order)
[2026-05-14 18:47:21] 2026-05-14 22:46:38,284 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 18:47:21] 2026-05-14 22:46:38,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 18:47:21] 2026-05-14 22:46:38,287 | INFO     | did not find any defunct processes belonging to 18424
[2026-05-14 18:47:21] 2026-05-14 22:46:38,289 | INFO     | did not find any defunct processes belonging to 18424
[2026-05-14 18:47:21] 2026-05-14 22:46:38,290 | INFO     | Ready for new job
[2026-05-14 18:47:21] 2026-05-14 22:46:38,291 | INFO     | ***************************************
[2026-05-14 18:47:21] 2026-05-14 22:46:38,291 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 18:47:21] 2026-05-14 22:46:38,291 | INFO     | ***************************************
[2026-05-14 18:47:21] 2026-05-14 22:46:38,291 | INFO     | 
[2026-05-14 18:47:21] 2026-05-14 22:46:38,292 | INFO     | architecture information:
[2026-05-14 18:47:21] 2026-05-14 22:46:38,292 | INFO     | executing command: cat /etc/os-release
[2026-05-14 18:47:21] 2026-05-14 22:46:38,302 | INFO     | cat /etc/os-release:
[2026-05-14 18:47:21] NAME="CentOS Linux"
[2026-05-14 18:47:21] VERSION="7 (Core)"
[2026-05-14 18:47:21] ID="centos"
[2026-05-14 18:47:21] ID_LIKE="rhel fedora"
[2026-05-14 18:47:21] VERSION_ID="7"
[2026-05-14 18:47:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 18:47:21] ANSI_COLOR="0;31"
[2026-05-14 18:47:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 18:47:21] HOME_URL="https://www.centos.org/"
[2026-05-14 18:47:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 18:47:21] 
[2026-05-14 18:47:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 18:47:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 18:47:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 18:47:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 18:47:21] 
[2026-05-14 18:47:21] 2026-05-14 22:46:38,302 | INFO     | ***************************************
[2026-05-14 18:47:21] 2026-05-14 22:46:38,805 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-05-14 18:47:21] 2026-05-14 22:46:38,821 | INFO     | sufficient remaining disk space (24544018432 B)
[2026-05-14 18:47:21] 2026-05-14 22:46:38,821 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 18:47:21] 2026-05-14 22:46:38,822 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 18:47:21] 2026-05-14 22:46:38,822 | INFO     | update_server=False
[2026-05-14 18:47:21] 2026-05-14 22:46:38,822 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 18:47:21] 2026-05-14 22:46:38,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 18:47:21] 2026-05-14 22:46:38,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 18:47:21] 2026-05-14 22:46:38,823 | INFO     | aborting loop
[2026-05-14 18:47:21] 2026-05-14 22:46:39,255 | INFO     | all data control threads have been joined
[2026-05-14 18:47:21] 2026-05-14 22:46:39,658 | INFO     | all job control threads have been joined
[2026-05-14 18:47:21] 2026-05-14 22:46:39,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 18:47:21] 2026-05-14 22:46:39,828 | INFO     | [job] retrieve thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:39,828 | INFO     | [job] queue monitor thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:39,828 | INFO     | [job] job monitor thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:39,841 | INFO     | all payload control threads have been joined
[2026-05-14 18:47:21] 2026-05-14 22:46:40,256 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:40,258 | INFO     | [data] control thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:40,664 | INFO     | [job] control thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:40,707 | INFO     | [payload] failed_post thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:40,847 | INFO     | [payload] control thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:41,041 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:41,094 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:41,094 | INFO     | [data] copytool_in thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:41,117 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:41,126 | INFO     | [job] validate thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:41,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 18:47:21] 2026-05-14 22:46:41,345 | INFO     | [payload] validate_post thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:41,738 | INFO     | [data] copytool_out thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:45,284 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 18:47:21] 2026-05-14 22:46:54,334 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-05-14 18:47:21] 2026-05-14 22:47:08,681 | INFO     | PID=4221 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-14 18:47:21] 2026-05-14 22:47:08,682 | INFO     | .. there are 3 such processes running
[2026-05-14 18:47:21] 2026-05-14 22:47:08,682 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 18:47:21] 2026-05-14 22:47:08,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 18:47:21] 2026-05-14 22:47:08,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 18:47:21] 2026-05-14 22:47:15,631 | INFO     | [monitor] cgroup control has ended
[2026-05-14 18:47:21] 2026-05-14 22:47:16,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253686695744)>', '<ExcThread(monitor, started 140252870067968)>']
[2026-05-14 18:47:21] 2026-05-14 22:47:16,718 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 18:47:21] 2026-05-14 22:47:16,719 | INFO     | [monitor] control thread has ended
[2026-05-14 18:47:21] 2026-05-14 22:47:21,665 | INFO     | all workflow threads have been joined
[2026-05-14 18:47:21] 2026-05-14 22:47:21,666 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 18:47:21] 2026-05-14 22:47:21,666 | INFO     | traces error code: 0
[2026-05-14 18:47:21] 2026-05-14 22:47:21,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 18:47:21] 2026-05-14 22:47:21,777 [wrapper] ==== pilot stdout END ====
[2026-05-14 18:47:21] 2026-05-14 22:47:21,780 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 18:47:21] 2026-05-14 22:47:21,783 [wrapper] pilotpid: 4221
[2026-05-14 18:47:21] 2026-05-14 22:47:21,786 [wrapper] Pilot exit status: 0
[2026-05-14 18:47:21] 2026-05-14 22:47:21,795 [wrapper] pandaids: 7138291792
[2026-05-14 18:47:21] 2026-05-14 22:47:21,826 [wrapper] cleanup supervisor_pilot  8994 4223
[2026-05-14 18:47:21] 2026-05-14 22:47:21,829 [wrapper] Test setup, not cleaning
[2026-05-14 18:47:21] 2026-05-14 22:47:21,832 [wrapper] apfmon messages muted
[2026-05-14 18:47:21] 2026-05-14 22:47:21,834 [wrapper] ==== wrapper stdout END ====
[2026-05-14 18:47:21] 2026-05-14 22:47:21,838 [wrapper] ==== wrapper stderr END ====
[2026-05-14 18:47:21]  *** Error codes and diagnostics ***
[2026-05-14 18:47:21]     "exeErrorCode": 0,
[2026-05-14 18:47:21]     "pilotErrorCode": 0,
[2026-05-14 18:47:21]  *** Listing of results directory ***
[2026-05-14 18:47:21] total 1119196
[2026-05-14 18:47:21] -rwx------ 1 boincer umatlas     36281 May 14 09:09 runpilot2-wrapper.sh
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas    683926 May 14 09:56 pilot3.tar.gz
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas      5631 May 14 10:07 queuedata.json
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas       100 May 14 16:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 18:47:21] -rwxr-xr-x 1 boincer umatlas      7986 May 14 16:16 run_atlas
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas       105 May 14 16:16 job.xml
[2026-05-14 18:47:21] -rw-r--r-- 2 boincer umatlas 981141504 May 14 16:16 EVNT.46375503._000280.pool.root.1
[2026-05-14 18:47:21] -rw-r--r-- 2 boincer umatlas     15667 May 14 16:16 start_atlas.sh
[2026-05-14 18:47:21] drwxrwx--x 2 boincer umatlas      4096 May 14 16:16 shared
[2026-05-14 18:47:21] -rw-r--r-- 2 boincer umatlas    697429 May 14 16:16 input.tar.gz
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas         0 May 14 16:16 boinc_lockfile
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas      2584 May 14 16:16 pandaJob.out
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas        57 May 14 16:16 setup.sh.local
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas    992747 May 14 16:16 agis_schedconf.cvmfs.json
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas   1502367 May 14 16:16 agis_ddmendpoints.agis.ALL.json
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas       445 May 14 16:17 workernode_map.json
[2026-05-14 18:47:21] drwx------ 5 boincer umatlas      4096 May 14 16:17 pilot3
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas      5867 May 14 18:39 init_data.xml
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas 158154957 May 14 18:45 HITS.50087155._002375.pool.root.1
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas       488 May 14 18:45 boinc_task_state.xml
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas        95 May 14 18:46 pilot_heartbeat.json
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas      1044 May 14 18:46 memory_monitor_summary.json
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas    473478 May 14 18:46 log.50087155._002375.job.log.tgz.1
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas      6428 May 14 18:46 heartbeat_new.json
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas      6319 May 14 18:46 heartbeat.json
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas        27 May 14 18:47 wrapper_checkpoint.txt
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas      8192 May 14 18:47 boinc_mmap_file
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas      4819 May 14 18:47 pilotlog.txt
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas    844818 May 14 18:47 log.50087155._002375.job.log.1
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas       357 May 14 18:47 output.list
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas       410 May 14 18:47 runtime_log
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas   1331200 May 14 18:47 result.tar.gz
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas      8964 May 14 18:47 runtime_log.err
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas       656 May 14 18:47 c9a301fa9882.diag
[2026-05-14 18:47:21] -rw-r--r-- 1 boincer umatlas     20785 May 14 18:47 stderr.txt
[2026-05-14 18:47:21] HITS file was successfully produced:
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas 158154957 May 14 18:45 shared/HITS.pool.root.1
[2026-05-14 18:47:21]  *** Contents of shared directory: ***
[2026-05-14 18:47:21] total 1114608
[2026-05-14 18:47:21] -rw-r--r-- 2 boincer umatlas 981141504 May 14 16:16 ATLAS.root_0
[2026-05-14 18:47:21] -rw-r--r-- 2 boincer umatlas     15667 May 14 16:16 start_atlas.sh
[2026-05-14 18:47:21] -rw-r--r-- 2 boincer umatlas    697429 May 14 16:16 input.tar.gz
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas 158154957 May 14 18:45 HITS.pool.root.1
[2026-05-14 18:47:21] -rw------- 1 boincer umatlas   1331200 May 14 18:47 result.tar.gz
18:47:23 (27027): run_atlas exited; CPU time 67159.406182
18:47:23 (27027): called boinc_finish(0)

</stderr_txt>
]]>

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