Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:19:06 (8705): wrapper (7.7.26015): starting
23:19:06 (8705): wrapper: running run_atlas (--nthreads 8)
[2026-05-14 23:19:06] Arguments: --nthreads 8
[2026-05-14 23:19:06] Threads: 8
[2026-05-14 23:19:06] Checking for CVMFS
[2026-05-14 23:19:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 23:19:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 23:19:06] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 23:19:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 23:19:07] 2.11.2.0 30965 42012 104708 159515 2 192 14183247 25165825 96 130560 0 18044132 99.952 3955538 3915 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-14 23:19:07] CVMFS is ok
[2026-05-14 23:19:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 23:19:07] Checking for apptainer binary...
[2026-05-14 23:19:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 23:19:07] Running /usr/bin/apptainer --version
[2026-05-14 23:19:07] apptainer version 1.3.2-1.el7
[2026-05-14 23:19:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 23:19:08] cg-vwn388.simple-grid.lan
[2026-05-14 23:19:08] apptainer works
[2026-05-14 23:19:08] Set ATHENA_PROC_NUMBER=8
[2026-05-14 23:19:08] Set ATHENA_CORE_NUMBER=8
[2026-05-14 23:19:08] Starting ATLAS job with PandaID=7138294403
[2026-05-14 23:19:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 23:23:34]  *** The last 200 lines of the pilot log: ***
[2026-05-14 23:23:34] 2026-05-14 21:22:35,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 23:23:34] 2026-05-14 21:22:35,517 | WARNING  | found no stored workdir sizes
[2026-05-14 23:23:34] 2026-05-14 21:22:35,517 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | WARNING  | wrong length of table data, x=[1778793601.0], y=[1089.0] (must be same and length>=4)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | ..............................
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | . Timing measurements:
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | . get job = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . initial setup = 6 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . payload setup = 14 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . stage-in = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . payload execution = 36 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . stage-out = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . log creation = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | ..............................
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/10/PanDA_Pilot-7138294403/pilotlog.txt
[2026-05-14 23:23:34] 2026-05-14 21:22:35,545 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 23:23:34] - Log from pilotlog.txt -
[2026-05-14 23:23:34] 2026-05-14 21:22:35,516 | INFO     | extracted standard info from prmon json
[2026-05-14 23:23:34] 2026-05-14 21:22:35,516 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 23:23:34] 2026-05-14 21:22:35,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 23:23:34] 2026-05-14 21:22:35,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 23:23:34] 2026-05-14 21:22:35,517 | WARNING  | found no stored workdir sizes
[2026-05-14 23:23:34] 2026-05-14 21:22:35,517 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | WARNING  | wrong length of table data, x=[1778793601.0], y=[1089.0] (must be same and length>=4)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | ..............................
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | . Timing measurements:
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | . get job = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . initial setup = 6 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . payload setup = 14 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . stage-in = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . payload execution = 36 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . stage-out = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . log creation = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | ..............................
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/10/PanDA_Pilot-7138294403/pilotlog.txt
[2026-05-14 23:23:34] 2026-05-14 21:22:35,546 | WARNING  | 
[2026-05-14 23:23:34] [begin log extracts]
[2026-05-14 23:23:34] - Log from pilotlog.txt -
[2026-05-14 23:23:34] 2026-05-14 21:22:35,516 | INFO     | extracted standard info from prmon json
[2026-05-14 23:23:34] 2026-05-14 21:22:35,516 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 23:23:34] 2026-05-14 21:22:35,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 23:23:34] 2026-05-14 21:22:35,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 23:23:34] 2026-05-14 21:22:35,517 | WARNING  | found no stored workdir sizes
[2026-05-14 23:23:34] 2026-05-14 21:22:35,517 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | WARNING  | wrong length of table data, x=[1778793601.0], y=[1089.0] (must be same and length>=4)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | ..............................
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | . Timing measurements:
[2026-05-14 23:23:34] 2026-05-14 21:22:35,518 | INFO     | . get job = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . initial setup = 6 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . payload setup = 14 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . stage-in = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . payload execution = 36 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . stage-out = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | . log creation = 0 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | ..............................
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 23:23:34] 2026-05-14 21:22:35,519 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/10/PanDA_Pilot-7138294403/pilotlog.txt
[2026-05-14 23:23:34] [end log extracts]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,546 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,547 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 23:23:34] 2026-05-14 21:22:35,661 | INFO     | 
[2026-05-14 23:23:34] 2026-05-14 21:22:35,661 | INFO     | job summary report
[2026-05-14 23:23:34] 2026-05-14 21:22:35,662 | INFO     | --------------------------------------------------
[2026-05-14 23:23:34] 2026-05-14 21:22:35,662 | INFO     | PanDA job id: 7138294403
[2026-05-14 23:23:34] 2026-05-14 21:22:35,662 | INFO     | task id: 50250204
[2026-05-14 23:23:34] 2026-05-14 21:22:35,662 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 21:20:27,337 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 23:23:34] 2026-05-14 21:22:35,662 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 23:23:34] 2026-05-14 21:22:35,662 | INFO     | pilot state: failed 
[2026-05-14 23:23:34] 2026-05-14 21:22:35,662 | INFO     | transexitcode: 65
[2026-05-14 23:23:34] 2026-05-14 21:22:35,662 | INFO     | exeerrorcode: 65
[2026-05-14 23:23:34] 2026-05-14 21:22:35,662 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,662 | INFO     | exitcode: 65
[2026-05-14 23:23:34] 2026-05-14 21:22:35,663 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,663 | INFO     | cpuconsumptiontime: 27 s
[2026-05-14 23:23:34] 2026-05-14 21:22:35,663 | INFO     | nevents: 0
[2026-05-14 23:23:34] 2026-05-14 21:22:35,663 | INFO     | neventsw: 0
[2026-05-14 23:23:34] 2026-05-14 21:22:35,663 | INFO     | pid: 16860
[2026-05-14 23:23:34] 2026-05-14 21:22:35,663 | INFO     | pgrp: 16860
[2026-05-14 23:23:34] 2026-05-14 21:22:35,663 | INFO     | corecount: 8
[2026-05-14 23:23:34] 2026-05-14 21:22:35,663 | INFO     | event service: False
[2026-05-14 23:23:34] 2026-05-14 21:22:35,663 | INFO     | sizes: {0: 2265929, 1: 2267503, 11: 2267531, 55: 2295270, 58: 2295270, 175: 2295436}
[2026-05-14 23:23:34] 2026-05-14 21:22:35,663 | INFO     | --------------------------------------------------
[2026-05-14 23:23:34] 2026-05-14 21:22:35,664 | INFO     | 
[2026-05-14 23:23:34] 2026-05-14 21:22:35,664 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-05-14 23:23:34] 2026-05-14 21:22:35,689 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,689 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,689 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,689 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,690 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,691 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,691 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 23:23:34] 2026-05-14 21:22:35,691 | INFO     | job 7138294403 has completed (purged errors)
[2026-05-14 23:23:34] 2026-05-14 21:22:35,692 | INFO     | overall cleanup function is called
[2026-05-14 23:23:34] 2026-05-14 21:22:36,698 | INFO     | --- collectZombieJob: --- 10, [16860]
[2026-05-14 23:23:34] 2026-05-14 21:22:36,698 | INFO     | zombie collector waiting for pid 16860
[2026-05-14 23:23:34] 2026-05-14 21:22:36,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 23:23:34] 2026-05-14 21:22:36,698 | INFO     | collected zombie processes
[2026-05-14 23:23:34] 2026-05-14 21:22:36,699 | INFO     | will attempt to kill all subprocesses of pid=16860
[2026-05-14 23:23:34] 2026-05-14 21:22:36,753 | INFO     | process IDs to be killed: [16860] (in reverse order)
[2026-05-14 23:23:34] 2026-05-14 21:22:36,822 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 23:23:34] 2026-05-14 21:22:36,823 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 23:23:34] 2026-05-14 21:22:36,825 | INFO     | did not find any defunct processes belonging to 16860
[2026-05-14 23:23:34] 2026-05-14 21:22:36,826 | INFO     | did not find any defunct processes belonging to 16860
[2026-05-14 23:23:34] 2026-05-14 21:22:36,826 | INFO     | Ready for new job
[2026-05-14 23:23:34] 2026-05-14 21:22:36,827 | INFO     | ***************************************
[2026-05-14 23:23:34] 2026-05-14 21:22:36,828 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 23:23:34] 2026-05-14 21:22:36,828 | INFO     | ***************************************
[2026-05-14 23:23:34] 2026-05-14 21:22:36,828 | INFO     | 
[2026-05-14 23:23:34] 2026-05-14 21:22:36,828 | INFO     | pilot is running in a VM
[2026-05-14 23:23:34] 2026-05-14 21:22:36,829 | INFO     | architecture information:
[2026-05-14 23:23:34] 2026-05-14 21:22:36,829 | INFO     | executing command: cat /etc/os-release
[2026-05-14 23:23:34] 2026-05-14 21:22:36,850 | INFO     | cat /etc/os-release:
[2026-05-14 23:23:34] NAME="CentOS Linux"
[2026-05-14 23:23:34] VERSION="7 (Core)"
[2026-05-14 23:23:34] ID="centos"
[2026-05-14 23:23:34] ID_LIKE="rhel fedora"
[2026-05-14 23:23:34] VERSION_ID="7"
[2026-05-14 23:23:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 23:23:34] ANSI_COLOR="0;31"
[2026-05-14 23:23:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 23:23:34] HOME_URL="https://www.centos.org/"
[2026-05-14 23:23:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 23:23:34] 
[2026-05-14 23:23:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 23:23:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 23:23:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 23:23:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 23:23:34] 
[2026-05-14 23:23:34] 2026-05-14 21:22:36,851 | INFO     | ***************************************
[2026-05-14 23:23:34] 2026-05-14 21:22:37,353 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-05-14 23:23:34] 2026-05-14 21:22:37,376 | INFO     | sufficient remaining disk space (498469961728 B)
[2026-05-14 23:23:34] 2026-05-14 21:22:37,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 23:23:34] 2026-05-14 21:22:37,377 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 23:23:34] 2026-05-14 21:22:37,377 | INFO     | update_server=False
[2026-05-14 23:23:34] 2026-05-14 21:22:37,377 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 23:23:34] 2026-05-14 21:22:37,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 23:23:34] 2026-05-14 21:22:37,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 23:23:34] 2026-05-14 21:22:37,378 | INFO     | aborting loop
[2026-05-14 23:23:34] 2026-05-14 21:22:37,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 23:23:34] 2026-05-14 21:22:37,864 | INFO     | all job control threads have been joined
[2026-05-14 23:23:34] 2026-05-14 21:22:38,134 | INFO     | all payload control threads have been joined
[2026-05-14 23:23:34] 2026-05-14 21:22:38,273 | INFO     | all data control threads have been joined
[2026-05-14 23:23:34] 2026-05-14 21:22:38,382 | INFO     | [job] retrieve thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:38,384 | INFO     | [job] job monitor thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:38,384 | INFO     | [job] queue monitor thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:38,411 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:38,461 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 23:23:34] 2026-05-14 21:22:38,508 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:38,744 | INFO     | [data] copytool_in thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:38,870 | INFO     | [job] control thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:39,024 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:39,140 | INFO     | [payload] control thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:39,279 | INFO     | [data] control thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:39,328 | INFO     | [job] validate thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:39,371 | INFO     | [payload] failed_post thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:39,674 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:39,932 | INFO     | [payload] validate_post thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:40,467 | INFO     | [data] copytool_out thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:22:41,384 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 23:23:34] 2026-05-14 21:23:07,344 | INFO     | PID=12440 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-14 23:23:34] 2026-05-14 21:23:07,344 | INFO     | .. there are 2 such processes running
[2026-05-14 23:23:34] 2026-05-14 21:23:07,344 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 23:23:34] 2026-05-14 21:23:07,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 23:23:34] 2026-05-14 21:23:07,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 23:23:34] 2026-05-14 21:23:28,314 | INFO     | [monitor] cgroup control has ended
[2026-05-14 23:23:34] 2026-05-14 21:23:29,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540817082176)>', '<ExcThread(monitor, started 140539584313088)>']
[2026-05-14 23:23:34] 2026-05-14 21:23:29,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 23:23:34] 2026-05-14 21:23:29,450 | INFO     | [monitor] control thread has ended
[2026-05-14 23:23:34] 2026-05-14 21:23:34,051 | INFO     | all workflow threads have been joined
[2026-05-14 23:23:34] 2026-05-14 21:23:34,051 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 23:23:34] 2026-05-14 21:23:34,051 | INFO     | traces error code: 0
[2026-05-14 23:23:34] 2026-05-14 21:23:34,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 23:23:34] 2026-05-14 21:23:34,188 [wrapper] ==== pilot stdout END ====
[2026-05-14 23:23:34] 2026-05-14 21:23:34,194 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 23:23:34] 2026-05-14 21:23:34,198 [wrapper] pilotpid: 12440
[2026-05-14 23:23:34] 2026-05-14 21:23:34,205 [wrapper] Pilot exit status: 0
[2026-05-14 23:23:34] 2026-05-14 21:23:34,221 [wrapper] pandaids: 7138294403
[2026-05-14 23:23:34] 2026-05-14 21:23:34,260 [wrapper] cleanup supervisor_pilot 12446 12441
[2026-05-14 23:23:34] 2026-05-14 21:23:34,264 [wrapper] Test setup, not cleaning
[2026-05-14 23:23:34] 2026-05-14 21:23:34,268 [wrapper] apfmon messages muted
[2026-05-14 23:23:34] 2026-05-14 21:23:34,273 [wrapper] ==== wrapper stdout END ====
[2026-05-14 23:23:34] 2026-05-14 21:23:34,278 [wrapper] ==== wrapper stderr END ====
[2026-05-14 23:23:34]  *** Error codes and diagnostics ***
[2026-05-14 23:23:34]     "exeErrorCode": 65,
[2026-05-14 23:23:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 23:23:34]     "pilotErrorCode": 1305,
[2026-05-14 23:23:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 23:23:34]  *** Listing of results directory ***
[2026-05-14 23:23:34] total 266348
[2026-05-14 23:23:34] -rwx------. 1 boinc boinc     36281 May 14 15:12 runpilot2-wrapper.sh
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc    683926 May 14 15:56 pilot3.tar.gz
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc      5631 May 14 16:11 queuedata.json
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc       100 May 14 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 23:23:34] -rwxr-xr-x. 1 boinc boinc      7986 May 14 23:19 run_atlas
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc       105 May 14 23:19 job.xml
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc      6306 May 14 23:19 init_data.xml
[2026-05-14 23:23:34] -rw-r--r--. 2 boinc boinc 268445592 May 14 23:19 EVNT.50238180._000086.pool.root.1
[2026-05-14 23:23:34] -rw-r--r--. 2 boinc boinc     15667 May 14 23:19 start_atlas.sh
[2026-05-14 23:23:34] drwxrwx--x. 2 boinc boinc        68 May 14 23:19 shared
[2026-05-14 23:23:34] -rw-r--r--. 2 boinc boinc    697451 May 14 23:19 input.tar.gz
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc         0 May 14 23:19 boinc_lockfile
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc      2562 May 14 23:19 pandaJob.out
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc    992747 May 14 23:19 agis_schedconf.cvmfs.json
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc   1502367 May 14 23:19 agis_ddmendpoints.agis.ALL.json
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc       415 May 14 23:19 workernode_map.json
[2026-05-14 23:23:34] drwx------. 5 boinc boinc      4096 May 14 23:19 pilot3
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc       934 May 14 23:20 memory_monitor_summary.json
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc     20387 May 14 23:20 log.50250204._002131.job.log.tgz.1
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc       482 May 14 23:20 boinc_task_state.xml
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc        95 May 14 23:22 pilot_heartbeat.json
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc      7010 May 14 23:22 heartbeat_new.json
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc      6972 May 14 23:22 heartbeat.json
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc        23 May 14 23:23 wrapper_checkpoint.txt
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc      8192 May 14 23:23 boinc_mmap_file
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc      4884 May 14 23:23 pilotlog.txt
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc     75640 May 14 23:23 log.50250204._002131.job.log.1
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc       188 May 14 23:23 output.list
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc       410 May 14 23:23 runtime_log
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc    112640 May 14 23:23 result.tar.gz
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc      8301 May 14 23:23 runtime_log.err
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc       637 May 14 23:23 ca39310950ec.diag
[2026-05-14 23:23:34] -rw-r--r--. 1 boinc boinc     21279 May 14 23:23 stderr.txt
[2026-05-14 23:23:34] No HITS result produced
[2026-05-14 23:23:34]  *** Contents of shared directory: ***
[2026-05-14 23:23:34] total 262968
[2026-05-14 23:23:34] -rw-r--r--. 2 boinc boinc 268445592 May 14 23:19 ATLAS.root_0
[2026-05-14 23:23:34] -rw-r--r--. 2 boinc boinc     15667 May 14 23:19 start_atlas.sh
[2026-05-14 23:23:34] -rw-r--r--. 2 boinc boinc    697451 May 14 23:19 input.tar.gz
[2026-05-14 23:23:34] -rw-------. 1 boinc boinc    112640 May 14 23:23 result.tar.gz
23:23:36 (8705): run_atlas exited; CPU time 27.596610
23:23:36 (8705): called boinc_finish(0)

</stderr_txt>
]]>

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