Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
14:06:10 (10971): wrapper (7.7.26015): starting
14:06:10 (10971): wrapper: running run_atlas (--nthreads 8)
[2026-05-14 14:06:10] Arguments: --nthreads 8
[2026-05-14 14:06:10] Threads: 8
[2026-05-14 14:06:10] Checking for CVMFS
[2026-05-14 14:06:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 14:06:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 14:06:10] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 14:06:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 14:06:11] 2.11.0.0 4265 7946 58448 159515 1 186 2911267 4096001 92 130560 1 2896325 99.766 821517 1127 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-05-14 14:06:11] CVMFS is ok
[2026-05-14 14:06:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 14:06:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 14:06:11] Further information can be found at the LHC@home message board.
[2026-05-14 14:06:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 14:06:11] Checking for apptainer binary...
[2026-05-14 14:06:11] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-05-14 14:06:11] apptainer is not installed, using version from CVMFS
[2026-05-14 14:06:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 14:06:11] WARNING: Environment variable TMPDIR already has value [/tmp/job_11612525/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node398
[2026-05-14 14:06:11] apptainer works
[2026-05-14 14:06:11] Set ATHENA_PROC_NUMBER=8
[2026-05-14 14:06:11] Set ATHENA_CORE_NUMBER=8
[2026-05-14 14:06:11] Starting ATLAS job with PandaID=7138674429
[2026-05-14 14:06:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11612525/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 14:09:23]  *** The last 200 lines of the pilot log: ***
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | found no stored workdir sizes
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | wrong length of table data, x=[1778760394.0], y=[988.0] (must be same and length>=4)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | could have reported an average CPU frequency of 2365 MHz (4 samples)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | ..............................
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . Timing measurements:
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . get job = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . initial setup = 2 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . payload setup = 3 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . stage-in = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | . payload execution = 13 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | . stage-out = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | . log creation = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | ..............................
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | executing command: tail -n 20 /tmp/job_11612525/atlas/pilot/slots/0/PanDA_Pilot-7138674429/pilotlog.txt
[2026-05-14 14:09:23] 2026-05-14 12:08:47,810 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 14:09:23] - Log from pilotlog.txt -
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | extracted standard info from prmon json
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | found no stored workdir sizes
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | wrong length of table data, x=[1778760394.0], y=[988.0] (must be same and length>=4)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | could have reported an average CPU frequency of 2365 MHz (4 samples)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | ..............................
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . Timing measurements:
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . get job = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . initial setup = 2 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . payload setup = 3 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . stage-in = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | . payload execution = 13 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | . stage-out = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | . log creation = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | ..............................
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | executing command: tail -n 20 /tmp/job_11612525/atlas/pilot/slots/0/PanDA_Pilot-7138674429/pilotlog.txt
[2026-05-14 14:09:23] 2026-05-14 12:08:47,810 | WARNING  | 
[2026-05-14 14:09:23] [begin log extracts]
[2026-05-14 14:09:23] - Log from pilotlog.txt -
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | extracted standard info from prmon json
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | found no stored workdir sizes
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | WARNING  | wrong length of table data, x=[1778760394.0], y=[988.0] (must be same and length>=4)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | could have reported an average CPU frequency of 2365 MHz (4 samples)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | ..............................
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . Timing measurements:
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . get job = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . initial setup = 2 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . payload setup = 3 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,803 | INFO     | . stage-in = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | . payload execution = 13 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | . stage-out = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | . log creation = 0 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | ..............................
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 14:09:23] 2026-05-14 12:08:47,804 | INFO     | executing command: tail -n 20 /tmp/job_11612525/atlas/pilot/slots/0/PanDA_Pilot-7138674429/pilotlog.txt
[2026-05-14 14:09:23] [end log extracts]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,810 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,811 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 14:09:23] 2026-05-14 12:08:47,858 | INFO     | 
[2026-05-14 14:09:23] 2026-05-14 12:08:47,858 | INFO     | job summary report
[2026-05-14 14:09:23] 2026-05-14 12:08:47,858 | INFO     | --------------------------------------------------
[2026-05-14 14:09:23] 2026-05-14 12:08:47,858 | INFO     | PanDA job id: 7138674429
[2026-05-14 14:09:23] 2026-05-14 12:08:47,858 | INFO     | task id: 50250192
[2026-05-14 14:09:23] 2026-05-14 12:08:47,858 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 14:06:41,156 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 14:09:23] 2026-05-14 12:08:47,858 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 14:09:23] 2026-05-14 12:08:47,858 | INFO     | pilot state: failed 
[2026-05-14 14:09:23] 2026-05-14 12:08:47,858 | INFO     | transexitcode: 65
[2026-05-14 14:09:23] 2026-05-14 12:08:47,858 | INFO     | exeerrorcode: 65
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | exitcode: 65
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | cpuconsumptiontime: 10 s
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | nevents: 0
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | neventsw: 0
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | pid: 21356
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | pgrp: 21356
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | corecount: 8
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | event service: False
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | sizes: {0: 2265719, 1: 2267659, 11: 2267659, 20: 2295182, 23: 2295182, 140: 2295348}
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | --------------------------------------------------
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | 
[2026-05-14 14:09:23] 2026-05-14 12:08:47,859 | INFO     | executing command: ls -lF /tmp/job_11612525/atlas/pilot/slots/0
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,867 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,868 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 14:09:23] 2026-05-14 12:08:47,868 | INFO     | job 7138674429 has completed (purged errors)
[2026-05-14 14:09:23] 2026-05-14 12:08:47,868 | INFO     | overall cleanup function is called
[2026-05-14 14:09:23] 2026-05-14 12:08:48,873 | INFO     | --- collectZombieJob: --- 10, [21356]
[2026-05-14 14:09:23] 2026-05-14 12:08:48,873 | INFO     | zombie collector waiting for pid 21356
[2026-05-14 14:09:23] 2026-05-14 12:08:48,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 14:09:23] 2026-05-14 12:08:48,873 | INFO     | collected zombie processes
[2026-05-14 14:09:23] 2026-05-14 12:08:48,873 | INFO     | will attempt to kill all subprocesses of pid=21356
[2026-05-14 14:09:23] 2026-05-14 12:08:48,953 | INFO     | process IDs to be killed: [21356] (in reverse order)
[2026-05-14 14:09:23] 2026-05-14 12:08:48,989 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 14:09:23] 2026-05-14 12:08:48,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 14:09:23] 2026-05-14 12:08:48,993 | INFO     | did not find any defunct processes belonging to 21356
[2026-05-14 14:09:23] 2026-05-14 12:08:48,995 | INFO     | did not find any defunct processes belonging to 21356
[2026-05-14 14:09:23] 2026-05-14 12:08:48,996 | INFO     | Ready for new job
[2026-05-14 14:09:23] 2026-05-14 12:08:48,996 | INFO     | ***************************************
[2026-05-14 14:09:23] 2026-05-14 12:08:48,996 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 14:09:23] 2026-05-14 12:08:48,996 | INFO     | ***************************************
[2026-05-14 14:09:23] 2026-05-14 12:08:48,996 | INFO     | 
[2026-05-14 14:09:23] 2026-05-14 12:08:49,009 | INFO     | architecture information:
[2026-05-14 14:09:23] 2026-05-14 12:08:49,009 | INFO     | executing command: cat /etc/os-release
[2026-05-14 14:09:23] 2026-05-14 12:08:49,016 | INFO     | cat /etc/os-release:
[2026-05-14 14:09:23] NAME="CentOS Linux"
[2026-05-14 14:09:23] VERSION="7 (Core)"
[2026-05-14 14:09:23] ID="centos"
[2026-05-14 14:09:23] ID_LIKE="rhel fedora"
[2026-05-14 14:09:23] VERSION_ID="7"
[2026-05-14 14:09:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 14:09:23] ANSI_COLOR="0;31"
[2026-05-14 14:09:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 14:09:23] HOME_URL="https://www.centos.org/"
[2026-05-14 14:09:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 14:09:23] 
[2026-05-14 14:09:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 14:09:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 14:09:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 14:09:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 14:09:23] 
[2026-05-14 14:09:23] 2026-05-14 12:08:49,017 | INFO     | ***************************************
[2026-05-14 14:09:23] 2026-05-14 12:08:49,519 | INFO     | executing command: df -mP /tmp/job_11612525/atlas/pilot/slots/0
[2026-05-14 14:09:23] 2026-05-14 12:08:49,526 | INFO     | sufficient remaining disk space (227571400704 B)
[2026-05-14 14:09:23] 2026-05-14 12:08:49,526 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 14:09:23] 2026-05-14 12:08:49,526 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 14:09:23] 2026-05-14 12:08:49,526 | INFO     | update_server=False
[2026-05-14 14:09:23] 2026-05-14 12:08:49,526 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 14:09:23] 2026-05-14 12:08:49,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 14:09:23] 2026-05-14 12:08:49,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 14:09:23] 2026-05-14 12:08:49,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 14:09:23] 2026-05-14 12:08:49,797 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 14:09:23] 2026-05-14 12:08:49,798 | INFO     | aborting loop
[2026-05-14 14:09:23] 2026-05-14 12:08:50,348 | INFO     | all data control threads have been joined
[2026-05-14 14:09:23] 2026-05-14 12:08:50,438 | INFO     | all payload control threads have been joined
[2026-05-14 14:09:23] 2026-05-14 12:08:50,462 | INFO     | all job control threads have been joined
[2026-05-14 14:09:23] 2026-05-14 12:08:50,532 | INFO     | [job] retrieve thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:50,532 | INFO     | [job] queue monitor thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:50,655 | INFO     | [data] copytool_in thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:50,803 | INFO     | [job] job monitor thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:51,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:51,060 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:51,230 | INFO     | [payload] failed_post thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:51,353 | INFO     | [data] control thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:51,443 | INFO     | [payload] control thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:51,467 | INFO     | [job] control thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:51,532 | INFO     | [data] copytool_out thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:51,754 | INFO     | [payload] validate_post thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:51,784 | INFO     | [job] validate thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:51,915 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:52,018 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:08:53,532 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 14:09:23] 2026-05-14 12:09:17,059 | INFO     | [monitor] cgroup control has ended
[2026-05-14 14:09:23] 2026-05-14 12:09:18,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063239936)>']
[2026-05-14 14:09:23] 2026-05-14 12:09:20,142 | INFO     | PID=15655 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-14 14:09:23] 2026-05-14 12:09:20,142 | INFO     | .. there are 4 such processes running
[2026-05-14 14:09:23] 2026-05-14 12:09:20,143 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 14:09:23] 2026-05-14 12:09:20,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 14:09:23] 2026-05-14 12:09:20,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 14:09:23] 2026-05-14 12:09:20,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 14:09:23] 2026-05-14 12:09:20,143 | INFO     | [monitor] control thread has ended
[2026-05-14 14:09:23] 2026-05-14 12:09:23,040 | INFO     | all workflow threads have been joined
[2026-05-14 14:09:23] 2026-05-14 12:09:23,040 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 14:09:23] 2026-05-14 12:09:23,041 | INFO     | traces error code: 0
[2026-05-14 14:09:23] 2026-05-14 12:09:23,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 14:09:23] 2026-05-14 12:09:23,092 [wrapper] ==== pilot stdout END ====
[2026-05-14 14:09:23] 2026-05-14 12:09:23,093 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 14:09:23] 2026-05-14 12:09:23,095 [wrapper] pilotpid: 15655
[2026-05-14 14:09:23] 2026-05-14 12:09:23,096 [wrapper] Pilot exit status: 0
[2026-05-14 14:09:23] 2026-05-14 12:09:23,099 [wrapper] pandaids: 7138674429
[2026-05-14 14:09:23] 2026-05-14 12:09:23,121 [wrapper] cleanup supervisor_pilot 15663 15656
[2026-05-14 14:09:23] 2026-05-14 12:09:23,122 [wrapper] Test setup, not cleaning
[2026-05-14 14:09:23] 2026-05-14 12:09:23,124 [wrapper] apfmon messages muted
[2026-05-14 14:09:23] 2026-05-14 12:09:23,125 [wrapper] ==== wrapper stdout END ====
[2026-05-14 14:09:23] 2026-05-14 12:09:23,126 [wrapper] ==== wrapper stderr END ====
[2026-05-14 14:09:23]  *** Error codes and diagnostics ***
[2026-05-14 14:09:23]     "exeErrorCode": 65,
[2026-05-14 14:09:23]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 14:09:23]     "pilotErrorCode": 1305,
[2026-05-14 14:09:23]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 14:09:23]  *** Listing of results directory ***
[2026-05-14 14:09:23] total 106604
[2026-05-14 14:09:23] -rwx------ 1 mf493845 unix-user     36281 May 14 05:11 runpilot2-wrapper.sh
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user      5631 May 14 07:11 queuedata.json
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user    683926 May 14 07:11 pilot3.tar.gz
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user       100 May 14 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 14:09:23] -rwxr-xr-x 1 mf493845 unix-user      7986 May 14 13:39 run_atlas
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user       105 May 14 13:39 job.xml
[2026-05-14 14:09:23] -rw-r--r-- 2 mf493845 unix-user     15667 May 14 14:06 start_atlas.sh
[2026-05-14 14:09:23] drwxrwx--x 2 mf493845 unix-user       100 May 14 14:06 shared
[2026-05-14 14:09:23] -rw-r--r-- 2 mf493845 unix-user    697451 May 14 14:06 input.tar.gz
[2026-05-14 14:09:23] -rw-r--r-- 2 mf493845 unix-user 104858303 May 14 14:06 EVNT.50238157._000504.pool.root.1
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user         0 May 14 14:06 boinc_setup_complete
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user      6308 May 14 14:06 init_data.xml
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user      8192 May 14 14:06 boinc_mmap_file
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user         0 May 14 14:06 boinc_lockfile
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user      2562 May 14 14:06 pandaJob.out
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user    992747 May 14 14:06 agis_schedconf.cvmfs.json
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user   1502367 May 14 14:06 agis_ddmendpoints.agis.ALL.json
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user       415 May 14 14:06 workernode_map.json
[2026-05-14 14:09:23] drwx------ 5 mf493845 unix-user       520 May 14 14:06 pilot3
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user       934 May 14 14:06 memory_monitor_summary.json
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user     22481 May 14 14:06 log.50250192._021669.job.log.tgz.1
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user      6992 May 14 14:08 heartbeat_new.json
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user      6953 May 14 14:08 heartbeat.json
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user        95 May 14 14:09 pilot_heartbeat.json
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user      4834 May 14 14:09 pilotlog.txt
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user     82015 May 14 14:09 log.50250192._021669.job.log.1
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user       188 May 14 14:09 output.list
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user       410 May 14 14:09 runtime_log
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user    122880 May 14 14:09 result.tar.gz
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user      8689 May 14 14:09 runtime_log.err
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user       624 May 14 14:09 3d7d9032c190.diag
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user     22098 May 14 14:09 stderr.txt
[2026-05-14 14:09:23] No HITS result produced
[2026-05-14 14:09:23]  *** Contents of shared directory: ***
[2026-05-14 14:09:23] total 103224
[2026-05-14 14:09:23] -rw-r--r-- 2 mf493845 unix-user     15667 May 14 14:06 start_atlas.sh
[2026-05-14 14:09:23] -rw-r--r-- 2 mf493845 unix-user    697451 May 14 14:06 input.tar.gz
[2026-05-14 14:09:23] -rw-r--r-- 2 mf493845 unix-user 104858303 May 14 14:06 ATLAS.root_0
[2026-05-14 14:09:23] -rw------- 1 mf493845 unix-user    122880 May 14 14:09 result.tar.gz
14:09:24 (10971): run_atlas exited; CPU time 11.774849
14:09:24 (10971): called boinc_finish(0)

</stderr_txt>
]]>

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