Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:22:20 (3336390): wrapper (7.7.26015): starting
07:22:20 (3336390): wrapper: running run_atlas (--nthreads 8)
[2026-05-14 07:22:20] Arguments: --nthreads 8
[2026-05-14 07:22:20] Threads: 8
[2026-05-14 07:22:20] Checking for CVMFS
[2026-05-14 07:22:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 07:22:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 07:22:21] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 07:22:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 07:22:22] 2.13.3.0 10828 20015 254720 159515 1 1042 21032813 32935936 24731 16776704 0 79145285 99.585 82228170 26942 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-14 07:22:22] CVMFS is ok
[2026-05-14 07:22:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 07:22:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 07:22:22] Further information can be found at the LHC@home message board.
[2026-05-14 07:22:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 07:22:22] Checking for apptainer binary...
[2026-05-14 07:22:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 07:22:22] Running /usr/bin/apptainer --version
[2026-05-14 07:22:22] apptainer version 1.4.5-3.el9
[2026-05-14 07:22:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 07:22:23] c-5-3.aglt2.org
[2026-05-14 07:22:23] apptainer works
[2026-05-14 07:22:23] Set ATHENA_PROC_NUMBER=8
[2026-05-14 07:22:23] Set ATHENA_CORE_NUMBER=8
[2026-05-14 07:22:23] Starting ATLAS job with PandaID=7138269983
[2026-05-14 07:22:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 07:26:59]  *** The last 200 lines of the pilot log: ***
[2026-05-14 07:26:59] 2026-05-14 11:26:01,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 07:26:59] 2026-05-14 11:26:01,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 07:26:59] 2026-05-14 11:26:01,231 | WARNING  | found no stored workdir sizes
[2026-05-14 07:26:59] 2026-05-14 11:26:01,231 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 07:26:59] 2026-05-14 11:26:01,231 | WARNING  | wrong length of table data, x=[1778757804.0], y=[776.0] (must be same and length>=4)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | ..............................
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . Timing measurements:
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . get job = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . initial setup = 12 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . payload setup = 20 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . stage-in = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . payload execution = 40 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | . stage-out = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | . log creation = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | ..............................
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7138269983/pilotlog.txt
[2026-05-14 07:26:59] 2026-05-14 11:26:01,348 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 07:26:59] - Log from pilotlog.txt -
[2026-05-14 07:26:59] 2026-05-14 11:26:01,226 | INFO     | extracted standard info from prmon json
[2026-05-14 07:26:59] 2026-05-14 11:26:01,227 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 07:26:59] 2026-05-14 11:26:01,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 07:26:59] 2026-05-14 11:26:01,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 07:26:59] 2026-05-14 11:26:01,231 | WARNING  | found no stored workdir sizes
[2026-05-14 07:26:59] 2026-05-14 11:26:01,231 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 07:26:59] 2026-05-14 11:26:01,231 | WARNING  | wrong length of table data, x=[1778757804.0], y=[776.0] (must be same and length>=4)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | ..............................
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . Timing measurements:
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . get job = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . initial setup = 12 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . payload setup = 20 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . stage-in = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . payload execution = 40 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | . stage-out = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | . log creation = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | ..............................
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7138269983/pilotlog.txt
[2026-05-14 07:26:59] 2026-05-14 11:26:01,348 | WARNING  | 
[2026-05-14 07:26:59] [begin log extracts]
[2026-05-14 07:26:59] - Log from pilotlog.txt -
[2026-05-14 07:26:59] 2026-05-14 11:26:01,226 | INFO     | extracted standard info from prmon json
[2026-05-14 07:26:59] 2026-05-14 11:26:01,227 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 07:26:59] 2026-05-14 11:26:01,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 07:26:59] 2026-05-14 11:26:01,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 07:26:59] 2026-05-14 11:26:01,231 | WARNING  | found no stored workdir sizes
[2026-05-14 07:26:59] 2026-05-14 11:26:01,231 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 07:26:59] 2026-05-14 11:26:01,231 | WARNING  | wrong length of table data, x=[1778757804.0], y=[776.0] (must be same and length>=4)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | ..............................
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . Timing measurements:
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . get job = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . initial setup = 12 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . payload setup = 20 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . stage-in = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,232 | INFO     | . payload execution = 40 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | . stage-out = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | . log creation = 0 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | ..............................
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 07:26:59] 2026-05-14 11:26:01,233 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7138269983/pilotlog.txt
[2026-05-14 07:26:59] [end log extracts]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,349 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,350 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 07:26:59] 2026-05-14 11:26:01,726 | INFO     | 
[2026-05-14 07:26:59] 2026-05-14 11:26:01,726 | INFO     | job summary report
[2026-05-14 07:26:59] 2026-05-14 11:26:01,726 | INFO     | --------------------------------------------------
[2026-05-14 07:26:59] 2026-05-14 11:26:01,727 | INFO     | PanDA job id: 7138269983
[2026-05-14 07:26:59] 2026-05-14 11:26:01,727 | INFO     | task id: 50250204
[2026-05-14 07:26:59] 2026-05-14 11:26:01,727 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 11:23:51,640 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 07:26:59] 2026-05-14 11:26:01,727 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 07:26:59] 2026-05-14 11:26:01,727 | INFO     | pilot state: failed 
[2026-05-14 07:26:59] 2026-05-14 11:26:01,727 | INFO     | transexitcode: 65
[2026-05-14 07:26:59] 2026-05-14 11:26:01,727 | INFO     | exeerrorcode: 65
[2026-05-14 07:26:59] 2026-05-14 11:26:01,727 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,727 | INFO     | exitcode: 65
[2026-05-14 07:26:59] 2026-05-14 11:26:01,728 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,728 | INFO     | cpuconsumptiontime: 25 s
[2026-05-14 07:26:59] 2026-05-14 11:26:01,728 | INFO     | nevents: 0
[2026-05-14 07:26:59] 2026-05-14 11:26:01,728 | INFO     | neventsw: 0
[2026-05-14 07:26:59] 2026-05-14 11:26:01,728 | INFO     | pid: 3345410
[2026-05-14 07:26:59] 2026-05-14 11:26:01,728 | INFO     | pgrp: 3345410
[2026-05-14 07:26:59] 2026-05-14 11:26:01,728 | INFO     | corecount: 8
[2026-05-14 07:26:59] 2026-05-14 11:26:01,728 | INFO     | event service: False
[2026-05-14 07:26:59] 2026-05-14 11:26:01,728 | INFO     | sizes: {0: 2267497, 1: 2267525, 64: 2290941, 65: 2295236, 68: 2295264, 186: 2295430}
[2026-05-14 07:26:59] 2026-05-14 11:26:01,729 | INFO     | --------------------------------------------------
[2026-05-14 07:26:59] 2026-05-14 11:26:01,729 | INFO     | 
[2026-05-14 07:26:59] 2026-05-14 11:26:01,729 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-05-14 07:26:59] 2026-05-14 11:26:01,886 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,887 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,888 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,889 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 07:26:59] 2026-05-14 11:26:01,889 | INFO     | job 7138269983 has completed (purged errors)
[2026-05-14 07:26:59] 2026-05-14 11:26:01,889 | INFO     | overall cleanup function is called
[2026-05-14 07:26:59] 2026-05-14 11:26:02,898 | INFO     | --- collectZombieJob: --- 10, [3345410]
[2026-05-14 07:26:59] 2026-05-14 11:26:02,899 | INFO     | zombie collector waiting for pid 3345410
[2026-05-14 07:26:59] 2026-05-14 11:26:02,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 07:26:59] 2026-05-14 11:26:02,899 | INFO     | collected zombie processes
[2026-05-14 07:26:59] 2026-05-14 11:26:02,899 | INFO     | will attempt to kill all subprocesses of pid=3345410
[2026-05-14 07:26:59] 2026-05-14 11:26:03,599 | INFO     | process IDs to be killed: [3345410] (in reverse order)
[2026-05-14 07:26:59] 2026-05-14 11:26:03,730 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 07:26:59] 2026-05-14 11:26:03,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 07:26:59] 2026-05-14 11:26:03,746 | INFO     | did not find any defunct processes belonging to 3345410
[2026-05-14 07:26:59] 2026-05-14 11:26:03,761 | INFO     | did not find any defunct processes belonging to 3345410
[2026-05-14 07:26:59] 2026-05-14 11:26:03,762 | INFO     | Ready for new job
[2026-05-14 07:26:59] 2026-05-14 11:26:03,763 | INFO     | ***************************************
[2026-05-14 07:26:59] 2026-05-14 11:26:03,763 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 07:26:59] 2026-05-14 11:26:03,763 | INFO     | ***************************************
[2026-05-14 07:26:59] 2026-05-14 11:26:03,763 | INFO     | 
[2026-05-14 07:26:59] 2026-05-14 11:26:03,766 | INFO     | architecture information:
[2026-05-14 07:26:59] 2026-05-14 11:26:03,766 | INFO     | executing command: cat /etc/os-release
[2026-05-14 07:26:59] 2026-05-14 11:26:03,785 | INFO     | cat /etc/os-release:
[2026-05-14 07:26:59] NAME="CentOS Linux"
[2026-05-14 07:26:59] VERSION="7 (Core)"
[2026-05-14 07:26:59] ID="centos"
[2026-05-14 07:26:59] ID_LIKE="rhel fedora"
[2026-05-14 07:26:59] VERSION_ID="7"
[2026-05-14 07:26:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 07:26:59] ANSI_COLOR="0;31"
[2026-05-14 07:26:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 07:26:59] HOME_URL="https://www.centos.org/"
[2026-05-14 07:26:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 07:26:59] 
[2026-05-14 07:26:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 07:26:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 07:26:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 07:26:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 07:26:59] 
[2026-05-14 07:26:59] 2026-05-14 11:26:03,785 | INFO     | ***************************************
[2026-05-14 07:26:59] 2026-05-14 11:26:04,289 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-05-14 07:26:59] 2026-05-14 11:26:04,413 | INFO     | sufficient remaining disk space (74615619584 B)
[2026-05-14 07:26:59] 2026-05-14 11:26:04,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 07:26:59] 2026-05-14 11:26:04,413 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 07:26:59] 2026-05-14 11:26:04,414 | INFO     | update_server=False
[2026-05-14 07:26:59] 2026-05-14 11:26:04,414 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 07:26:59] 2026-05-14 11:26:04,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 07:26:59] 2026-05-14 11:26:04,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 07:26:59] 2026-05-14 11:26:04,416 | INFO     | aborting loop
[2026-05-14 07:26:59] 2026-05-14 11:26:04,611 | INFO     | all data control threads have been joined
[2026-05-14 07:26:59] 2026-05-14 11:26:04,889 | INFO     | all job control threads have been joined
[2026-05-14 07:26:59] 2026-05-14 11:26:05,419 | INFO     | [job] retrieve thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:05,426 | INFO     | [job] job monitor thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:05,579 | INFO     | [job] validate thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:05,617 | INFO     | [data] control thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:05,884 | INFO     | all payload control threads have been joined
[2026-05-14 07:26:59] 2026-05-14 11:26:05,886 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:05,892 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:05,899 | INFO     | [job] control thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:06,036 | INFO     | [payload] validate_post thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:06,063 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:06,085 | INFO     | [data] copytool_in thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:06,421 | INFO     | [data] copytool_out thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:06,431 | INFO     | [payload] failed_post thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:06,707 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:06,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 07:26:59] 2026-05-14 11:26:06,890 | INFO     | [payload] control thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:07,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 07:26:59] 2026-05-14 11:26:07,747 | INFO     | [job] queue monitor thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:11,071 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 07:26:59] 2026-05-14 11:26:33,802 | INFO     | PID=3340523 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 07:26:59] 2026-05-14 11:26:33,802 | INFO     | .. there are 35 such processes running
[2026-05-14 07:26:59] 2026-05-14 11:26:33,802 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 07:26:59] 2026-05-14 11:26:33,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 07:26:59] 2026-05-14 11:26:33,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 07:26:59] 2026-05-14 11:26:53,611 | INFO     | [monitor] cgroup control has ended
[2026-05-14 07:26:59] 2026-05-14 11:26:53,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530684671808)>', '<ExcThread(monitor, started 140530337203968)>']
[2026-05-14 07:26:59] 2026-05-14 11:26:53,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 07:26:59] 2026-05-14 11:26:53,950 | INFO     | [monitor] control thread has ended
[2026-05-14 07:26:59] 2026-05-14 11:26:58,778 | INFO     | all workflow threads have been joined
[2026-05-14 07:26:59] 2026-05-14 11:26:58,779 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 07:26:59] 2026-05-14 11:26:58,779 | INFO     | traces error code: 0
[2026-05-14 07:26:59] 2026-05-14 11:26:58,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 07:26:59] 2026-05-14 11:26:58,986 [wrapper] ==== pilot stdout END ====
[2026-05-14 07:26:59] 2026-05-14 11:26:59,025 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 07:26:59] 2026-05-14 11:26:59,062 [wrapper] pilotpid: 3340523
[2026-05-14 07:26:59] 2026-05-14 11:26:59,066 [wrapper] Pilot exit status: 0
[2026-05-14 07:26:59] 2026-05-14 11:26:59,082 [wrapper] pandaids: 7138269983
[2026-05-14 07:26:59] 2026-05-14 11:26:59,169 [wrapper] cleanup supervisor_pilot 3340532 3340524
[2026-05-14 07:26:59] 2026-05-14 11:26:59,171 [wrapper] Test setup, not cleaning
[2026-05-14 07:26:59] 2026-05-14 11:26:59,174 [wrapper] apfmon messages muted
[2026-05-14 07:26:59] 2026-05-14 11:26:59,177 [wrapper] ==== wrapper stdout END ====
[2026-05-14 07:26:59] 2026-05-14 11:26:59,180 [wrapper] ==== wrapper stderr END ====
[2026-05-14 07:26:59]  *** Error codes and diagnostics ***
[2026-05-14 07:26:59]     "exeErrorCode": 65,
[2026-05-14 07:26:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 07:26:59]     "pilotErrorCode": 1305,
[2026-05-14 07:26:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 07:26:59]  *** Listing of results directory ***
[2026-05-14 07:26:59] total 266940
[2026-05-14 07:26:59] -rwx------. 1 boincer umatlas     36281 May 14 02:45 runpilot2-wrapper.sh
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas      5631 May 14 05:56 queuedata.json
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas    683926 May 14 06:56 pilot3.tar.gz
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas       100 May 14 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 07:26:59] -rwxr-xr-x. 1 boincer umatlas      7986 May 14 07:22 run_atlas
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas       105 May 14 07:22 job.xml
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas      6615 May 14 07:22 init_data.xml
[2026-05-14 07:26:59] -rw-r--r--. 2 boincer umatlas 269041059 May 14 07:22 EVNT.50238180._000065.pool.root.1
[2026-05-14 07:26:59] -rw-r--r--. 2 boincer umatlas    697440 May 14 07:22 input.tar.gz
[2026-05-14 07:26:59] -rw-r--r--. 2 boincer umatlas     15667 May 14 07:22 start_atlas.sh
[2026-05-14 07:26:59] drwxrwx--x. 2 boincer umatlas      4096 May 14 07:22 shared
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas         0 May 14 07:22 boinc_lockfile
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas      2560 May 14 07:22 pandaJob.out
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas        57 May 14 07:22 setup.sh.local
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas    992747 May 14 07:22 agis_schedconf.cvmfs.json
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas   1502367 May 14 07:22 agis_ddmendpoints.agis.ALL.json
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas       438 May 14 07:22 workernode_map.json
[2026-05-14 07:26:59] drwx------. 5 boincer umatlas      4096 May 14 07:22 pilot3
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas       482 May 14 07:23 boinc_task_state.xml
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas       979 May 14 07:23 memory_monitor_summary.json
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas     21490 May 14 07:24 log.50250204._001601.job.log.tgz.1
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas        95 May 14 07:25 pilot_heartbeat.json
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas      7087 May 14 07:26 heartbeat_new.json
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas      7049 May 14 07:26 heartbeat.json
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas      8192 May 14 07:26 boinc_mmap_file
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas        23 May 14 07:26 wrapper_checkpoint.txt
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas      4823 May 14 07:26 pilotlog.txt
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas     82175 May 14 07:26 log.50250204._001601.job.log.1
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas       188 May 14 07:26 output.list
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas       410 May 14 07:26 runtime_log
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas    122880 May 14 07:26 result.tar.gz
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas      8796 May 14 07:26 runtime_log.err
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas       636 May 14 07:26 6f945df0bcb2.diag
[2026-05-14 07:26:59] -rw-r--r--. 1 boincer umatlas      2140 May 14 07:26 stderr.txt
[2026-05-14 07:26:59] No HITS result produced
[2026-05-14 07:26:59]  *** Contents of shared directory: ***
[2026-05-14 07:26:59] total 263556
[2026-05-14 07:26:59] -rw-r--r--. 2 boincer umatlas 269041059 May 14 07:22 ATLAS.root_0
[2026-05-14 07:26:59] -rw-r--r--. 2 boincer umatlas    697440 May 14 07:22 input.tar.gz
[2026-05-14 07:26:59] -rw-r--r--. 2 boincer umatlas     15667 May 14 07:22 start_atlas.sh
[2026-05-14 07:26:59] -rw-------. 1 boincer umatlas    122880 May 14 07:26 result.tar.gz
07:27:00 (3336390): run_atlas exited; CPU time 32.118774
07:27:00 (3336390): called boinc_finish(0)

</stderr_txt>
]]>

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