Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
13:18:59 (20802): wrapper (7.7.26015): starting
13:18:59 (20802): wrapper: running run_atlas (--nthreads 8)
[2026-05-14 13:18:59] Arguments: --nthreads 8
[2026-05-14 13:18:59] Threads: 8
[2026-05-14 13:18:59] Checking for CVMFS
[2026-05-14 13:18:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 13:18:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 13:18:59] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 13:18:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 13:18:59] 2.11.0.0 4119 3087 49264 159515 1 186 1352821 4096000 648 130560 0 59565 97.041 440801 824 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-05-14 13:18:59] CVMFS is ok
[2026-05-14 13:18:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 13:18:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 13:18:59] Further information can be found at the LHC@home message board.
[2026-05-14 13:18:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 13:18:59] Checking for apptainer binary...
[2026-05-14 13:18:59] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-05-14 13:18:59] apptainer is not installed, using version from CVMFS
[2026-05-14 13:18:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 13:19:00] WARNING: Environment variable TMPDIR already has value [/tmp/job_11611846/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node085
[2026-05-14 13:19:00] apptainer works
[2026-05-14 13:19:00] Set ATHENA_PROC_NUMBER=8
[2026-05-14 13:19:00] Set ATHENA_CORE_NUMBER=8
[2026-05-14 13:19:00] Starting ATLAS job with PandaID=7138589328
[2026-05-14 13:19:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11611846/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 13:22:12]  *** The last 200 lines of the pilot log: ***
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | found no stored workdir sizes
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | wrong length of table data, x=[1778757563.0], y=[851.0] (must be same and length>=4)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | could have reported an average CPU frequency of 2365 MHz (4 samples)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | ..............................
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . Timing measurements:
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . get job = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . initial setup = 2 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . payload setup = 3 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . stage-in = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . payload execution = 12 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . stage-out = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | . log creation = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | ..............................
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | executing command: tail -n 20 /tmp/job_11611846/atlas/pilot/slots/0/PanDA_Pilot-7138589328/pilotlog.txt
[2026-05-14 13:22:12] 2026-05-14 11:21:36,657 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 13:22:12] - Log from pilotlog.txt -
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | extracted standard info from prmon json
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | found no stored workdir sizes
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | wrong length of table data, x=[1778757563.0], y=[851.0] (must be same and length>=4)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | could have reported an average CPU frequency of 2365 MHz (4 samples)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | ..............................
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . Timing measurements:
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . get job = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . initial setup = 2 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . payload setup = 3 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . stage-in = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . payload execution = 12 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . stage-out = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | . log creation = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | ..............................
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | executing command: tail -n 20 /tmp/job_11611846/atlas/pilot/slots/0/PanDA_Pilot-7138589328/pilotlog.txt
[2026-05-14 13:22:12] 2026-05-14 11:21:36,657 | WARNING  | 
[2026-05-14 13:22:12] [begin log extracts]
[2026-05-14 13:22:12] - Log from pilotlog.txt -
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | extracted standard info from prmon json
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | found no stored workdir sizes
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | WARNING  | wrong length of table data, x=[1778757563.0], y=[851.0] (must be same and length>=4)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | could have reported an average CPU frequency of 2365 MHz (4 samples)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | ..............................
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . Timing measurements:
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . get job = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . initial setup = 2 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . payload setup = 3 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . stage-in = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . payload execution = 12 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,650 | INFO     | . stage-out = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | . log creation = 0 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | ..............................
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 13:22:12] 2026-05-14 11:21:36,651 | INFO     | executing command: tail -n 20 /tmp/job_11611846/atlas/pilot/slots/0/PanDA_Pilot-7138589328/pilotlog.txt
[2026-05-14 13:22:12] [end log extracts]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,657 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,657 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | 
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | job summary report
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | --------------------------------------------------
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | PanDA job id: 7138589328
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | task id: 50250192
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 13:19:30,022 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | pilot state: failed 
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | transexitcode: 65
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | exeerrorcode: 65
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | exitcode: 65
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | cpuconsumptiontime: 9 s
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | nevents: 0
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | neventsw: 0
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | pid: 7191
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | pgrp: 7191
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | corecount: 8
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | event service: False
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | sizes: {0: 2265608, 1: 2267604, 11: 2267604, 19: 2290838, 20: 2290814, 21: 2295152, 23: 2295308, 140: 2295474}
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | --------------------------------------------------
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | 
[2026-05-14 13:22:12] 2026-05-14 11:21:36,764 | INFO     | executing command: ls -lF /tmp/job_11611846/atlas/pilot/slots/0
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,774 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,774 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 13:22:12] 2026-05-14 11:21:36,774 | INFO     | job 7138589328 has completed (purged errors)
[2026-05-14 13:22:12] 2026-05-14 11:21:36,774 | INFO     | overall cleanup function is called
[2026-05-14 13:22:12] 2026-05-14 11:21:37,779 | INFO     | --- collectZombieJob: --- 10, [7191]
[2026-05-14 13:22:12] 2026-05-14 11:21:37,779 | INFO     | zombie collector waiting for pid 7191
[2026-05-14 13:22:12] 2026-05-14 11:21:37,779 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 13:22:12] 2026-05-14 11:21:37,779 | INFO     | collected zombie processes
[2026-05-14 13:22:12] 2026-05-14 11:21:37,779 | INFO     | will attempt to kill all subprocesses of pid=7191
[2026-05-14 13:22:12] 2026-05-14 11:21:37,861 | INFO     | process IDs to be killed: [7191] (in reverse order)
[2026-05-14 13:22:12] 2026-05-14 11:21:37,895 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 13:22:12] 2026-05-14 11:21:37,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 13:22:12] 2026-05-14 11:21:37,899 | INFO     | did not find any defunct processes belonging to 7191
[2026-05-14 13:22:12] 2026-05-14 11:21:37,903 | INFO     | did not find any defunct processes belonging to 7191
[2026-05-14 13:22:12] 2026-05-14 11:21:37,903 | INFO     | Ready for new job
[2026-05-14 13:22:12] 2026-05-14 11:21:37,904 | INFO     | ***************************************
[2026-05-14 13:22:12] 2026-05-14 11:21:37,904 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 13:22:12] 2026-05-14 11:21:37,904 | INFO     | ***************************************
[2026-05-14 13:22:12] 2026-05-14 11:21:37,904 | INFO     | 
[2026-05-14 13:22:12] 2026-05-14 11:21:37,917 | INFO     | architecture information:
[2026-05-14 13:22:12] 2026-05-14 11:21:37,917 | INFO     | executing command: cat /etc/os-release
[2026-05-14 13:22:12] 2026-05-14 11:21:37,924 | INFO     | cat /etc/os-release:
[2026-05-14 13:22:12] NAME="CentOS Linux"
[2026-05-14 13:22:12] VERSION="7 (Core)"
[2026-05-14 13:22:12] ID="centos"
[2026-05-14 13:22:12] ID_LIKE="rhel fedora"
[2026-05-14 13:22:12] VERSION_ID="7"
[2026-05-14 13:22:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 13:22:12] ANSI_COLOR="0;31"
[2026-05-14 13:22:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 13:22:12] HOME_URL="https://www.centos.org/"
[2026-05-14 13:22:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 13:22:12] 
[2026-05-14 13:22:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 13:22:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 13:22:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 13:22:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 13:22:12] 
[2026-05-14 13:22:12] 2026-05-14 11:21:37,924 | INFO     | ***************************************
[2026-05-14 13:22:12] 2026-05-14 11:21:38,426 | INFO     | executing command: df -mP /tmp/job_11611846/atlas/pilot/slots/0
[2026-05-14 13:22:12] 2026-05-14 11:21:38,432 | INFO     | sufficient remaining disk space (228830740480 B)
[2026-05-14 13:22:12] 2026-05-14 11:21:38,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 13:22:12] 2026-05-14 11:21:38,432 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 13:22:12] 2026-05-14 11:21:38,432 | INFO     | update_server=False
[2026-05-14 13:22:12] 2026-05-14 11:21:38,432 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 13:22:12] 2026-05-14 11:21:38,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 13:22:12] 2026-05-14 11:21:38,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 13:22:12] 2026-05-14 11:21:38,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 13:22:12] 2026-05-14 11:21:38,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 13:22:12] 2026-05-14 11:21:38,886 | INFO     | aborting loop
[2026-05-14 13:22:12] 2026-05-14 11:21:39,384 | INFO     | all data control threads have been joined
[2026-05-14 13:22:12] 2026-05-14 11:21:39,438 | INFO     | [job] retrieve thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:39,438 | INFO     | [job] queue monitor thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:39,455 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:39,484 | INFO     | all payload control threads have been joined
[2026-05-14 13:22:12] 2026-05-14 11:21:39,504 | INFO     | all job control threads have been joined
[2026-05-14 13:22:12] 2026-05-14 11:21:39,546 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:39,687 | INFO     | [data] copytool_in thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:39,742 | INFO     | [payload] failed_post thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:39,891 | INFO     | [job] job monitor thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:40,123 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:40,389 | INFO     | [data] control thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:40,438 | INFO     | [data] copytool_out thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:40,489 | INFO     | [payload] control thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:40,509 | INFO     | [job] control thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:40,711 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:40,804 | INFO     | [payload] validate_post thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:40,826 | INFO     | [job] validate thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:21:42,556 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 13:22:12] 2026-05-14 11:22:06,207 | INFO     | [monitor] cgroup control has ended
[2026-05-14 13:22:12] 2026-05-14 11:22:07,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061138688)>']
[2026-05-14 13:22:12] 2026-05-14 11:22:09,204 | INFO     | PID=27922 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-14 13:22:12] 2026-05-14 11:22:09,204 | INFO     | .. there are 4 such processes running
[2026-05-14 13:22:12] 2026-05-14 11:22:09,205 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 13:22:12] 2026-05-14 11:22:09,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 13:22:12] 2026-05-14 11:22:09,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 13:22:12] 2026-05-14 11:22:09,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 13:22:12] 2026-05-14 11:22:09,205 | INFO     | [monitor] control thread has ended
[2026-05-14 13:22:12] 2026-05-14 11:22:12,083 | INFO     | all workflow threads have been joined
[2026-05-14 13:22:12] 2026-05-14 11:22:12,083 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 13:22:12] 2026-05-14 11:22:12,083 | INFO     | traces error code: 0
[2026-05-14 13:22:12] 2026-05-14 11:22:12,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 13:22:12] 2026-05-14 11:22:12,132 [wrapper] ==== pilot stdout END ====
[2026-05-14 13:22:12] 2026-05-14 11:22:12,133 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 13:22:12] 2026-05-14 11:22:12,134 [wrapper] pilotpid: 27922
[2026-05-14 13:22:12] 2026-05-14 11:22:12,135 [wrapper] Pilot exit status: 0
[2026-05-14 13:22:12] 2026-05-14 11:22:12,139 [wrapper] pandaids: 7138589328
[2026-05-14 13:22:12] 2026-05-14 11:22:12,161 [wrapper] cleanup supervisor_pilot 27928 27923
[2026-05-14 13:22:12] 2026-05-14 11:22:12,162 [wrapper] Test setup, not cleaning
[2026-05-14 13:22:12] 2026-05-14 11:22:12,163 [wrapper] apfmon messages muted
[2026-05-14 13:22:12] 2026-05-14 11:22:12,164 [wrapper] ==== wrapper stdout END ====
[2026-05-14 13:22:12] 2026-05-14 11:22:12,166 [wrapper] ==== wrapper stderr END ====
[2026-05-14 13:22:12]  *** Error codes and diagnostics ***
[2026-05-14 13:22:12]     "exeErrorCode": 65,
[2026-05-14 13:22:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 13:22:12]     "pilotErrorCode": 1305,
[2026-05-14 13:22:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 13:22:12]  *** Listing of results directory ***
[2026-05-14 13:22:12] total 103744
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user    683926 May 13 23:11 pilot3.tar.gz
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user      5631 May 13 23:13 queuedata.json
[2026-05-14 13:22:12] -rwx------ 1 mf493845 unix-user     36281 May 13 23:14 runpilot2-wrapper.sh
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user       100 May 14 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 13:22:12] -rwxr-xr-x 1 mf493845 unix-user      7986 May 14 12:53 run_atlas
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user       105 May 14 12:53 job.xml
[2026-05-14 13:22:12] -rw-r--r-- 2 mf493845 unix-user 101930692 May 14 13:18 EVNT.50238157._000193.pool.root.1
[2026-05-14 13:22:12] -rw-r--r-- 2 mf493845 unix-user     15667 May 14 13:18 start_atlas.sh
[2026-05-14 13:22:12] drwxrwx--x 2 mf493845 unix-user       100 May 14 13:18 shared
[2026-05-14 13:22:12] -rw-r--r-- 2 mf493845 unix-user    697443 May 14 13:18 input.tar.gz
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user      6307 May 14 13:18 init_data.xml
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user         0 May 14 13:18 boinc_setup_complete
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user      8192 May 14 13:18 boinc_mmap_file
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user         0 May 14 13:18 boinc_lockfile
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user      2559 May 14 13:19 pandaJob.out
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user    992747 May 14 13:19 agis_schedconf.cvmfs.json
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user   1502367 May 14 13:19 agis_ddmendpoints.agis.ALL.json
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user       415 May 14 13:19 workernode_map.json
[2026-05-14 13:22:12] drwx------ 5 mf493845 unix-user       520 May 14 13:19 pilot3
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user       939 May 14 13:19 memory_monitor_summary.json
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user     22491 May 14 13:19 log.50250192._015141.job.log.tgz.1
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user      6990 May 14 13:21 heartbeat_new.json
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user      6951 May 14 13:21 heartbeat.json
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user        95 May 14 13:22 pilot_heartbeat.json
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user      4834 May 14 13:22 pilotlog.txt
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user     82050 May 14 13:22 log.50250192._015141.job.log.1
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user       188 May 14 13:22 output.list
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user       410 May 14 13:22 runtime_log
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user    122880 May 14 13:22 result.tar.gz
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user      8689 May 14 13:22 runtime_log.err
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user       624 May 14 13:22 e998c570e926.diag
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user     22113 May 14 13:22 stderr.txt
[2026-05-14 13:22:12] No HITS result produced
[2026-05-14 13:22:12]  *** Contents of shared directory: ***
[2026-05-14 13:22:12] total 100364
[2026-05-14 13:22:12] -rw-r--r-- 2 mf493845 unix-user 101930692 May 14 13:18 ATLAS.root_0
[2026-05-14 13:22:12] -rw-r--r-- 2 mf493845 unix-user     15667 May 14 13:18 start_atlas.sh
[2026-05-14 13:22:12] -rw-r--r-- 2 mf493845 unix-user    697443 May 14 13:18 input.tar.gz
[2026-05-14 13:22:12] -rw------- 1 mf493845 unix-user    122880 May 14 13:22 result.tar.gz
13:22:13 (20802): run_atlas exited; CPU time 11.754243
13:22:13 (20802): called boinc_finish(0)

</stderr_txt>
]]>

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