Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:21:26 (3899973): wrapper (7.7.26015): starting
11:21:26 (3899973): wrapper: running run_atlas (--nthreads 4)
[2026-05-14 11:21:26] Arguments: --nthreads 4
[2026-05-14 11:21:26] Threads: 4
[2026-05-14 11:21:26] Checking for CVMFS
[2026-05-14 11:21:26] No cvmfs_config command found, will try listing directly
[2026-05-14 11:21:26] CVMFS is ok
[2026-05-14 11:21:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 11:21:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 11:21:26] Further information can be found at the LHC@home message board.
[2026-05-14 11:21:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 11:21:26] Checking for apptainer binary...
[2026-05-14 11:21:26] which: no apptainer in ((null))
[2026-05-14 11:21:26] apptainer is not installed, using version from CVMFS
[2026-05-14 11:21:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 11:21:26] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-14 11:21:26] apptainer works
[2026-05-14 11:21:26] Set ATHENA_PROC_NUMBER=4
[2026-05-14 11:21:26] Set ATHENA_CORE_NUMBER=4
[2026-05-14 11:21:26] Starting ATLAS job with PandaID=7138267294
[2026-05-14 11:21:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 13:10:01]  *** The last 200 lines of the pilot log: ***
[2026-05-14 13:10:01] 2026-05-14 11:08:56,590 | INFO     | mean y: 2360873.85
[2026-05-14 13:10:01] 2026-05-14 11:08:56,590 | INFO     | intersect: 2360873.85
[2026-05-14 13:10:01] 2026-05-14 11:08:56,590 | INFO     | chi2: 0.002341461373591423
[2026-05-14 13:10:01] 2026-05-14 11:08:56,591 | INFO     | current chi2=0.002341461373591423 (change=99.79132022288952 %)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,591 | INFO     | sum of square deviations: 265828240.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,591 | INFO     | sum of deviations: -1844388741.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,591 | INFO     | mean x (centered): 0.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,591 | INFO     | mean y: 2358287.1578947366
[2026-05-14 13:10:01] 2026-05-14 11:08:56,591 | INFO     | intersect: 2358287.1578947366
[2026-05-14 13:10:01] 2026-05-14 11:08:56,592 | INFO     | chi2: 0.00137398442502215
[2026-05-14 13:10:01] 2026-05-14 11:08:56,592 | INFO     | current chi2=0.00137398442502215 (change=41.319364029709355 %)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,592 | INFO     | sum of square deviations: 226022842.5
[2026-05-14 13:10:01] 2026-05-14 11:08:56,592 | INFO     | sum of deviations: -1238242690.5
[2026-05-14 13:10:01] 2026-05-14 11:08:56,592 | INFO     | mean x (centered): 0.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,592 | INFO     | mean y: 2355962.811111111
[2026-05-14 13:10:01] 2026-05-14 11:08:56,593 | INFO     | intersect: 2355962.811111111
[2026-05-14 13:10:01] 2026-05-14 11:08:56,593 | INFO     | chi2: 0.0008009532711318196
[2026-05-14 13:10:01] 2026-05-14 11:08:56,593 | INFO     | current chi2=0.0008009532711318196 (change=41.70579691113257 %)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,593 | INFO     | sum of square deviations: 190403570.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,593 | INFO     | sum of deviations: -833451356.9999999
[2026-05-14 13:10:01] 2026-05-14 11:08:56,593 | INFO     | mean x (centered): 0.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,594 | INFO     | mean y: 2354248.705882353
[2026-05-14 13:10:01] 2026-05-14 11:08:56,594 | INFO     | intersect: 2354248.705882353
[2026-05-14 13:10:01] 2026-05-14 11:08:56,594 | INFO     | chi2: 0.0004233408149057346
[2026-05-14 13:10:01] 2026-05-14 11:08:56,594 | INFO     | current chi2=0.0004233408149057346 (change=47.14537911712181 %)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,594 | INFO     | sum of square deviations: 158737860.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,594 | INFO     | sum of deviations: -510616085.5
[2026-05-14 13:10:01] 2026-05-14 11:08:56,595 | INFO     | mean x (centered): 0.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,595 | INFO     | mean y: 2352698.4375
[2026-05-14 13:10:01] 2026-05-14 11:08:56,595 | INFO     | intersect: 2352698.4375
[2026-05-14 13:10:01] 2026-05-14 11:08:56,595 | INFO     | chi2: 0.0001716458603658677
[2026-05-14 13:10:01] 2026-05-14 11:08:56,595 | INFO     | current chi2=0.0001716458603658677 (change=59.454450333571515 %)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,595 | INFO     | sum of square deviations: 130793150.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,595 | INFO     | sum of deviations: -320085970.99999994
[2026-05-14 13:10:01] 2026-05-14 11:08:56,596 | INFO     | mean x (centered): 0.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,596 | INFO     | mean y: 2351659.4266666668
[2026-05-14 13:10:01] 2026-05-14 11:08:56,596 | INFO     | intersect: 2351659.4266666668
[2026-05-14 13:10:01] 2026-05-14 11:08:56,596 | INFO     | chi2: 8.903768251571203e-05
[2026-05-14 13:10:01] 2026-05-14 11:08:56,596 | INFO     | current chi2=8.903768251571203e-05 (change=48.127101739636565 %)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,596 | INFO     | sum of square deviations: 106336877.5
[2026-05-14 13:10:01] 2026-05-14 11:08:56,596 | INFO     | sum of deviations: -207906422.00000006
[2026-05-14 13:10:01] 2026-05-14 11:08:56,597 | INFO     | mean x (centered): 0.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,597 | INFO     | mean y: 2350962.942857143
[2026-05-14 13:10:01] 2026-05-14 11:08:56,597 | INFO     | intersect: 2350962.942857143
[2026-05-14 13:10:01] 2026-05-14 11:08:56,597 | INFO     | chi2: 5.7749895384394496e-05
[2026-05-14 13:10:01] 2026-05-14 11:08:56,597 | INFO     | current chi2=5.7749895384394496e-05 (change=35.139938784678435 %)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,597 | INFO     | left removable region not found
[2026-05-14 13:10:01] 2026-05-14 11:08:56,597 | INFO     | sum of square deviations: 300842850.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,598 | INFO     | sum of deviations: 7083711376.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,598 | INFO     | mean x (centered): 0.0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,598 | INFO     | mean y: 2329157.404040404
[2026-05-14 13:10:01] 2026-05-14 11:08:56,598 | INFO     | intersect: 2329157.404040404
[2026-05-14 13:10:01] 2026-05-14 11:08:56,598 | INFO     | chi2: 1.124574739198536
[2026-05-14 13:10:01] 2026-05-14 11:08:56,598 | INFO     | current memory leak: 23.55 B/s (using 99 data points, chi2=1.12)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | could have reported an average CPU frequency of 2774 MHz (7 samples)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | ..............................
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | . Timing measurements:
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | . get job = 0 s
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | . initial setup = 6 s
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | . payload setup = 12 s
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | . stage-in = 0 s
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | . payload execution = 6398 s
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | . stage-out = 0 s
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | . log creation = 0 s
[2026-05-14 13:10:01] 2026-05-14 11:08:56,599 | INFO     | ..............................
[2026-05-14 13:10:01] 2026-05-14 11:08:56,685 | INFO     | 
[2026-05-14 13:10:01] 2026-05-14 11:08:56,686 | INFO     | job summary report
[2026-05-14 13:10:01] 2026-05-14 11:08:56,686 | INFO     | --------------------------------------------------
[2026-05-14 13:10:01] 2026-05-14 11:08:56,686 | INFO     | PanDA job id: 7138267294
[2026-05-14 13:10:01] 2026-05-14 11:08:56,686 | INFO     | task id: 50087078
[2026-05-14 13:10:01] 2026-05-14 11:08:56,686 | INFO     | errors: (none)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,686 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 13:10:01] 2026-05-14 11:08:56,686 | INFO     | pilot state: finished 
[2026-05-14 13:10:01] 2026-05-14 11:08:56,686 | INFO     | transexitcode: 0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,686 | INFO     | exeerrorcode: 0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | exeerrordiag: 
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | exitcode: 0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | exitmsg: OK
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | cpuconsumptiontime: 24396 s
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | nevents: 400
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | neventsw: 0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | pid: 3909292
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | pgrp: 3909292
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | corecount: 4
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | event service: False
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | sizes: {0: 2265625, 1: 2267510, 12: 2267510, 6414: 2294379, 6415: 2303399, 6417: 2303455, 6420: 2303777}
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | --------------------------------------------------
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | 
[2026-05-14 13:10:01] 2026-05-14 11:08:56,687 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-05-14 13:10:01] 2026-05-14 11:08:56,708 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,708 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,708 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,708 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 13:10:01] 2026-05-14 11:08:56,709 | INFO     | job 7138267294 has completed (purged errors)
[2026-05-14 13:10:01] 2026-05-14 11:08:56,710 | INFO     | overall cleanup function is called
[2026-05-14 13:10:01] 2026-05-14 11:08:57,717 | INFO     | --- collectZombieJob: --- 10, [3909292]
[2026-05-14 13:10:01] 2026-05-14 11:08:57,717 | INFO     | zombie collector waiting for pid 3909292
[2026-05-14 13:10:01] 2026-05-14 11:08:57,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 13:10:01] 2026-05-14 11:08:57,718 | INFO     | collected zombie processes
[2026-05-14 13:10:01] 2026-05-14 11:08:57,718 | INFO     | will attempt to kill all subprocesses of pid=3909292
[2026-05-14 13:10:01] 2026-05-14 11:08:58,034 | INFO     | process IDs to be killed: [3909292] (in reverse order)
[2026-05-14 13:10:01] 2026-05-14 11:08:58,255 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 13:10:01] 2026-05-14 11:08:58,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 13:10:01] 2026-05-14 11:08:58,281 | INFO     | did not find any defunct processes belonging to 3909292
[2026-05-14 13:10:01] 2026-05-14 11:08:58,297 | INFO     | did not find any defunct processes belonging to 3909292
[2026-05-14 13:10:01] 2026-05-14 11:08:58,298 | INFO     | Ready for new job
[2026-05-14 13:10:01] 2026-05-14 11:08:58,299 | INFO     | ***************************************
[2026-05-14 13:10:01] 2026-05-14 11:08:58,299 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 13:10:01] 2026-05-14 11:08:58,300 | INFO     | ***************************************
[2026-05-14 13:10:01] 2026-05-14 11:08:58,300 | INFO     | 
[2026-05-14 13:10:01] 2026-05-14 11:08:58,307 | INFO     | architecture information:
[2026-05-14 13:10:01] 2026-05-14 11:08:58,308 | INFO     | executing command: cat /etc/os-release
[2026-05-14 13:10:01] 2026-05-14 11:08:58,326 | INFO     | cat /etc/os-release:
[2026-05-14 13:10:01] NAME="CentOS Linux"
[2026-05-14 13:10:01] VERSION="7 (Core)"
[2026-05-14 13:10:01] ID="centos"
[2026-05-14 13:10:01] ID_LIKE="rhel fedora"
[2026-05-14 13:10:01] VERSION_ID="7"
[2026-05-14 13:10:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 13:10:01] ANSI_COLOR="0;31"
[2026-05-14 13:10:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 13:10:01] HOME_URL="https://www.centos.org/"
[2026-05-14 13:10:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 13:10:01] 
[2026-05-14 13:10:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 13:10:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 13:10:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 13:10:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 13:10:01] 
[2026-05-14 13:10:01] 2026-05-14 11:08:58,327 | INFO     | ***************************************
[2026-05-14 13:10:01] 2026-05-14 11:08:58,830 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-05-14 13:10:01] 2026-05-14 11:08:58,853 | INFO     | sufficient remaining disk space (169274769408 B)
[2026-05-14 13:10:01] 2026-05-14 11:08:58,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 13:10:01] 2026-05-14 11:08:58,854 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 13:10:01] 2026-05-14 11:08:58,854 | INFO     | update_server=False
[2026-05-14 13:10:01] 2026-05-14 11:08:58,854 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 13:10:01] 2026-05-14 11:08:58,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 13:10:01] 2026-05-14 11:08:58,855 | INFO     | aborting loop
[2026-05-14 13:10:01] 2026-05-14 11:08:59,140 | INFO     | all data control threads have been joined
[2026-05-14 13:10:01] 2026-05-14 11:08:59,554 | INFO     | all job control threads have been joined
[2026-05-14 13:10:01] 2026-05-14 11:08:59,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 13:10:01] 2026-05-14 11:08:59,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 13:10:01] 2026-05-14 11:08:59,860 | INFO     | [job] retrieve thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:08:59,860 | INFO     | [job] job monitor thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:08:59,962 | INFO     | all payload control threads have been joined
[2026-05-14 13:10:01] 2026-05-14 11:09:00,023 | INFO     | [data] copytool_in thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:00,146 | INFO     | [data] control thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:00,559 | INFO     | [job] control thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:00,581 | INFO     | [job] validate thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:00,705 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:00,783 | INFO     | [payload] failed_post thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:00,824 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:00,967 | INFO     | [payload] control thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:01,017 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:01,397 | INFO     | [payload] validate_post thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:01,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 13:10:01] 2026-05-14 11:09:01,702 | INFO     | [data] copytool_out thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:02,702 | INFO     | [job] queue monitor thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:03,603 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:09,713 | INFO     | job.realtimelogging is not enabled
[2026-05-14 13:10:01] 2026-05-14 11:09:10,718 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 13:10:01] 2026-05-14 11:09:29,287 | INFO     | PID=3904063 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 13:10:01] 2026-05-14 11:09:29,287 | INFO     | .. there are 20 such processes running
[2026-05-14 13:10:01] 2026-05-14 11:09:29,290 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 13:10:01] 2026-05-14 11:09:29,290 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 13:10:01] 2026-05-14 11:09:29,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 13:10:01] 2026-05-14 11:09:54,070 | INFO     | [monitor] cgroup control has ended
[2026-05-14 13:10:01] 2026-05-14 11:09:55,809 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22742238312256)>', '<ExcThread(monitor, started 22741993649920)>']
[2026-05-14 13:10:01] 2026-05-14 11:09:56,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 13:10:01] 2026-05-14 11:09:56,416 | INFO     | [monitor] control thread has ended
[2026-05-14 13:10:01] 2026-05-14 11:10:00,833 | INFO     | all workflow threads have been joined
[2026-05-14 13:10:01] 2026-05-14 11:10:00,834 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 13:10:01] 2026-05-14 11:10:00,834 | INFO     | traces error code: 0
[2026-05-14 13:10:01] 2026-05-14 11:10:00,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 13:10:01] 2026-05-14 11:10:00,959 [wrapper] ==== pilot stdout END ====
[2026-05-14 13:10:01] 2026-05-14 11:10:00,963 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 13:10:01] 2026-05-14 11:10:00,967 [wrapper] pilotpid: 3904063
[2026-05-14 13:10:01] 2026-05-14 11:10:00,971 [wrapper] Pilot exit status: 0
[2026-05-14 13:10:01] 2026-05-14 11:10:00,986 [wrapper] pandaids: 7138267294
[2026-05-14 13:10:01] 2026-05-14 11:10:01,128 [wrapper] cleanup supervisor_pilot  263652 3904064
[2026-05-14 13:10:01] 2026-05-14 11:10:01,133 [wrapper] Test setup, not cleaning
[2026-05-14 13:10:01] 2026-05-14 11:10:01,137 [wrapper] apfmon messages muted
[2026-05-14 13:10:01] 2026-05-14 11:10:01,140 [wrapper] ==== wrapper stdout END ====
[2026-05-14 13:10:01] 2026-05-14 11:10:01,144 [wrapper] ==== wrapper stderr END ====
[2026-05-14 13:10:01]  *** Error codes and diagnostics ***
[2026-05-14 13:10:01]     "exeErrorCode": 0,
[2026-05-14 13:10:01]     "pilotErrorCode": 0,
[2026-05-14 13:10:01]  *** Listing of results directory ***
[2026-05-14 13:10:01] total 629740
[2026-05-14 13:10:01] -rwx------. 1 boinc boinc     36281 May 14 07:56 runpilot2-wrapper.sh
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc    683926 May 14 09:24 pilot3.tar.gz
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc      5631 May 14 09:26 queuedata.json
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc       100 May 14 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 13:10:01] -rwxr-xr-x. 1 boinc boinc      7986 May 14 11:21 run_atlas
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc       105 May 14 11:21 job.xml
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc      6540 May 14 11:21 init_data.xml
[2026-05-14 13:10:01] -rw-r--r--. 2 boinc boinc 446941932 May 14 11:21 EVNT.46701437._000742.pool.root.1
[2026-05-14 13:10:01] -rw-r--r--. 2 boinc boinc     15667 May 14 11:21 start_atlas.sh
[2026-05-14 13:10:01] drwxrwx--x. 2 boinc boinc      4096 May 14 11:21 shared
[2026-05-14 13:10:01] -rw-r--r--. 2 boinc boinc    697430 May 14 11:21 input.tar.gz
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc         0 May 14 11:21 boinc_lockfile
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc      2564 May 14 11:21 pandaJob.out
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc    992937 May 14 11:21 agis_schedconf.cvmfs.json
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc   1502367 May 14 11:21 agis_ddmendpoints.agis.ALL.json
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc       440 May 14 11:21 workernode_map.json
[2026-05-14 13:10:01] drwx------. 5 boinc boinc      4096 May 14 11:21 pilot3
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc 192024453 May 14 13:08 HITS.50087078._004564.pool.root.1
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc       488 May 14 13:08 boinc_task_state.xml
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc      1028 May 14 13:08 memory_monitor_summary.json
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc    264670 May 14 13:08 log.50087078._004564.job.log.tgz.1
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc      6365 May 14 13:08 heartbeat_new.json
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc      6256 May 14 13:08 heartbeat.json
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc        95 May 14 13:09 pilot_heartbeat.json
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc      8192 May 14 13:10 boinc_mmap_file
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc        27 May 14 13:10 wrapper_checkpoint.txt
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc      4905 May 14 13:10 pilotlog.txt
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc    618943 May 14 13:10 log.50087078._004564.job.log.1
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc       357 May 14 13:10 output.list
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc       410 May 14 13:10 runtime_log
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc    901120 May 14 13:10 result.tar.gz
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc      8827 May 14 13:10 runtime_log.err
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc       662 May 14 13:10 63f6b9f47ac8.diag
[2026-05-14 13:10:01] -rw-r--r--. 1 boinc boinc     20587 May 14 13:10 stderr.txt
[2026-05-14 13:10:01] HITS file was successfully produced:
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc 192024453 May 14 13:08 shared/HITS.pool.root.1
[2026-05-14 13:10:01]  *** Contents of shared directory: ***
[2026-05-14 13:10:01] total 625580
[2026-05-14 13:10:01] -rw-r--r--. 2 boinc boinc 446941932 May 14 11:21 ATLAS.root_0
[2026-05-14 13:10:01] -rw-r--r--. 2 boinc boinc     15667 May 14 11:21 start_atlas.sh
[2026-05-14 13:10:01] -rw-r--r--. 2 boinc boinc    697430 May 14 11:21 input.tar.gz
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc 192024453 May 14 13:08 HITS.pool.root.1
[2026-05-14 13:10:01] -rw-------. 1 boinc boinc    901120 May 14 13:10 result.tar.gz
13:10:03 (3899973): run_atlas exited; CPU time 24643.184707
13:10:03 (3899973): called boinc_finish(0)

</stderr_txt>
]]>

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