Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:33:51 (151474): wrapper (7.7.26015): starting
03:33:51 (151474): wrapper: running run_atlas (--nthreads 10)
[2026-05-14 03:33:51] Arguments: --nthreads 10
[2026-05-14 03:33:51] Threads: 10
[2026-05-14 03:33:51] Checking for CVMFS
[2026-05-14 03:33:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 03:33:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 03:33:52] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 03:33:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 03:33:53] 2.13.3.0 19217 19768 114764 159513 1 617 34078339 40960000 35644 16776704 0 276075017 99.810 196419968 38652 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-14 03:33:53] CVMFS is ok
[2026-05-14 03:33:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 03:33:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 03:33:53] Further information can be found at the LHC@home message board.
[2026-05-14 03:33:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 03:33:53] Checking for apptainer binary...
[2026-05-14 03:33:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 03:33:53] Running /usr/bin/apptainer --version
[2026-05-14 03:33:53] apptainer version 1.4.5-3.el9
[2026-05-14 03:33:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 03:33:54] c8-7-6.aglt2.org
[2026-05-14 03:33:54] apptainer works
[2026-05-14 03:33:54] Set ATHENA_PROC_NUMBER=10
[2026-05-14 03:33:54] Set ATHENA_CORE_NUMBER=10
[2026-05-14 03:33:54] Starting ATLAS job with PandaID=7138266711
[2026-05-14 03:33:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 03:49:14]  *** The last 200 lines of the pilot log: ***
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | WARNING  | wrong length of table data, x=[1778744426.0, 1778744487.0, 1778744548.0, 1778744609.0, 1778744670.0, 1778744731.0], y=[1929.0, 13209.0, 15201.0, 5963.0, 230934.0, 
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | could have reported an average CPU frequency of 3746 MHz (4 samples)
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | ..............................
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . Timing measurements:
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . get job = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . initial setup = 48 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . payload setup = 216 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . stage-in = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . payload execution = 370 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . stage-out = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . log creation = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | ..............................
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-7138266711/pilotlog.txt
[2026-05-14 03:49:14] 2026-05-14 07:48:09,571 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 03:49:14] - Log from pilotlog.txt -
[2026-05-14 03:49:14] 2026-05-14 07:48:09,486 | INFO     | payload/TRF did not report the number of read events
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7138266711/memory_monitor_summary.json (trf name=prmon)
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | INFO     | extracted standard info from prmon json
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | WARNING  | wrong length of table data, x=[1778744426.0, 1778744487.0, 1778744548.0, 1778744609.0, 1778744670.0, 1778744731.0], y=[1929.0, 13209.0, 15201.0, 5963.0, 230934.0, 
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | could have reported an average CPU frequency of 3746 MHz (4 samples)
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | ..............................
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . Timing measurements:
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . get job = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . initial setup = 48 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . payload setup = 216 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . stage-in = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . payload execution = 370 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . stage-out = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . log creation = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | ..............................
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-7138266711/pilotlog.txt
[2026-05-14 03:49:14] 2026-05-14 07:48:09,571 | WARNING  | 
[2026-05-14 03:49:14] [begin log extracts]
[2026-05-14 03:49:14] - Log from pilotlog.txt -
[2026-05-14 03:49:14] 2026-05-14 07:48:09,486 | INFO     | payload/TRF did not report the number of read events
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7138266711/memory_monitor_summary.json (trf name=prmon)
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | INFO     | extracted standard info from prmon json
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 03:49:14] 2026-05-14 07:48:09,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | WARNING  | wrong length of table data, x=[1778744426.0, 1778744487.0, 1778744548.0, 1778744609.0, 1778744670.0, 1778744731.0], y=[1929.0, 13209.0, 15201.0, 5963.0, 230934.0, 
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | could have reported an average CPU frequency of 3746 MHz (4 samples)
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | ..............................
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . Timing measurements:
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . get job = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . initial setup = 48 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . payload setup = 216 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . stage-in = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . payload execution = 370 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . stage-out = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | . log creation = 0 s
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | ..............................
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 03:49:14] 2026-05-14 07:48:09,517 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-7138266711/pilotlog.txt
[2026-05-14 03:49:14] [end log extracts]
[2026-05-14 03:49:14] 2026-05-14 07:48:09,571 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 03:49:14] 2026-05-14 07:48:09,572 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | 
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | job summary report
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | --------------------------------------------------
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | PanDA job id: 7138266711
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | task id: 50250204
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 07:45:57,380 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | pilot state: failed 
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | transexitcode: 65
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | exeerrorcode: 65
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | exitcode: 65
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | cpuconsumptiontime: 28 s
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | nevents: 0
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | neventsw: 0
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | pid: 177219
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | pgrp: 177219
[2026-05-14 03:49:14] 2026-05-14 07:48:10,151 | INFO     | corecount: 10
[2026-05-14 03:49:14] 2026-05-14 07:48:10,152 | INFO     | event service: False
[2026-05-14 03:49:14] 2026-05-14 07:48:10,152 | INFO     | sizes: {0: 2265645, 1: 2265729, 2: 2267558, 12: 2267558, 592: 2291226, 593: 2295709, 595: 2295709, 711: 2295903}
[2026-05-14 03:49:14] 2026-05-14 07:48:10,152 | INFO     | --------------------------------------------------
[2026-05-14 03:49:14] 2026-05-14 07:48:10,152 | INFO     | 
[2026-05-14 03:49:14] 2026-05-14 07:48:10,152 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-05-14 03:49:14] 2026-05-14 07:48:10,307 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,307 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,307 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,307 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | job 7138266711 has completed (purged errors)
[2026-05-14 03:49:14] 2026-05-14 07:48:10,308 | INFO     | overall cleanup function is called
[2026-05-14 03:49:14] 2026-05-14 07:48:11,315 | INFO     | --- collectZombieJob: --- 10, [177219]
[2026-05-14 03:49:14] 2026-05-14 07:48:11,317 | INFO     | zombie collector waiting for pid 177219
[2026-05-14 03:49:14] 2026-05-14 07:48:11,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 03:49:14] 2026-05-14 07:48:11,317 | INFO     | collected zombie processes
[2026-05-14 03:49:14] 2026-05-14 07:48:11,317 | INFO     | will attempt to kill all subprocesses of pid=177219
[2026-05-14 03:49:14] 2026-05-14 07:48:12,000 | INFO     | PID=157995 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-14 03:49:14] 2026-05-14 07:48:12,000 | INFO     | .. there are 34 such processes running
[2026-05-14 03:49:14] 2026-05-14 07:48:13,351 | INFO     | process IDs to be killed: [177219] (in reverse order)
[2026-05-14 03:49:14] 2026-05-14 07:48:13,740 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 03:49:14] 2026-05-14 07:48:13,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 03:49:14] 2026-05-14 07:48:13,773 | INFO     | did not find any defunct processes belonging to 177219
[2026-05-14 03:49:14] 2026-05-14 07:48:13,812 | INFO     | did not find any defunct processes belonging to 177219
[2026-05-14 03:49:14] 2026-05-14 07:48:13,817 | INFO     | Ready for new job
[2026-05-14 03:49:14] 2026-05-14 07:48:13,818 | INFO     | ***************************************
[2026-05-14 03:49:14] 2026-05-14 07:48:13,818 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 03:49:14] 2026-05-14 07:48:13,818 | INFO     | ***************************************
[2026-05-14 03:49:14] 2026-05-14 07:48:13,818 | INFO     | 
[2026-05-14 03:49:14] 2026-05-14 07:48:13,827 | INFO     | architecture information:
[2026-05-14 03:49:14] 2026-05-14 07:48:13,835 | INFO     | executing command: cat /etc/os-release
[2026-05-14 03:49:14] 2026-05-14 07:48:13,940 | INFO     | cat /etc/os-release:
[2026-05-14 03:49:14] NAME="CentOS Linux"
[2026-05-14 03:49:14] VERSION="7 (Core)"
[2026-05-14 03:49:14] ID="centos"
[2026-05-14 03:49:14] ID_LIKE="rhel fedora"
[2026-05-14 03:49:14] VERSION_ID="7"
[2026-05-14 03:49:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 03:49:14] ANSI_COLOR="0;31"
[2026-05-14 03:49:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 03:49:14] HOME_URL="https://www.centos.org/"
[2026-05-14 03:49:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 03:49:14] 
[2026-05-14 03:49:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 03:49:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 03:49:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 03:49:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 03:49:14] 
[2026-05-14 03:49:14] 2026-05-14 07:48:13,940 | INFO     | ***************************************
[2026-05-14 03:49:14] 2026-05-14 07:48:14,444 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-05-14 03:49:14] 2026-05-14 07:48:14,539 | INFO     | sufficient remaining disk space (162446442496 B)
[2026-05-14 03:49:14] 2026-05-14 07:48:14,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 03:49:14] 2026-05-14 07:48:14,540 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 03:49:14] 2026-05-14 07:48:14,540 | INFO     | update_server=False
[2026-05-14 03:49:14] 2026-05-14 07:48:14,540 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 03:49:14] 2026-05-14 07:48:14,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 03:49:14] 2026-05-14 07:48:14,541 | INFO     | aborting loop
[2026-05-14 03:49:14] 2026-05-14 07:48:14,712 | INFO     | all data control threads have been joined
[2026-05-14 03:49:14] 2026-05-14 07:48:14,753 | INFO     | all payload control threads have been joined
[2026-05-14 03:49:14] 2026-05-14 07:48:15,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 03:49:14] 2026-05-14 07:48:15,546 | INFO     | [job] retrieve thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:15,556 | INFO     | [job] job monitor thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:15,617 | INFO     | [job] validate thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:15,617 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:15,617 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:15,718 | INFO     | [data] control thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:15,763 | INFO     | [payload] control thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:15,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 03:49:14] 2026-05-14 07:48:15,851 | INFO     | [data] copytool_in thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:16,090 | INFO     | [payload] validate_post thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:16,151 | INFO     | all job control threads have been joined
[2026-05-14 03:49:14] 2026-05-14 07:48:16,162 | INFO     | [job] queue monitor thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:16,208 | INFO     | [payload] failed_post thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:16,648 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:16,800 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:17,166 | INFO     | [job] control thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:17,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 03:49:14] 2026-05-14 07:48:17,771 | INFO     | [data] copytool_out thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:21,693 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 03:49:14] 2026-05-14 07:48:45,621 | INFO     | PID=157995 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-14 03:49:14] 2026-05-14 07:48:45,621 | INFO     | .. there are 34 such processes running
[2026-05-14 03:49:14] 2026-05-14 07:48:45,634 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 03:49:14] 2026-05-14 07:48:45,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 03:49:14] 2026-05-14 07:48:45,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 03:49:14] 2026-05-14 07:49:06,688 | INFO     | [monitor] cgroup control has ended
[2026-05-14 03:49:14] 2026-05-14 07:49:08,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139688875947840)>', '<ExcThread(monitor, started 139688425805568)>']
[2026-05-14 03:49:14] 2026-05-14 07:49:08,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 03:49:14] 2026-05-14 07:49:08,872 | INFO     | [monitor] control thread has ended
[2026-05-14 03:49:14] 2026-05-14 07:49:13,401 | INFO     | all workflow threads have been joined
[2026-05-14 03:49:14] 2026-05-14 07:49:13,401 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 03:49:14] 2026-05-14 07:49:13,401 | INFO     | traces error code: 0
[2026-05-14 03:49:14] 2026-05-14 07:49:13,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 03:49:14] 2026-05-14 07:49:13,716 [wrapper] ==== pilot stdout END ====
[2026-05-14 03:49:14] 2026-05-14 07:49:13,728 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 03:49:14] 2026-05-14 07:49:13,755 [wrapper] pilotpid: 157995
[2026-05-14 03:49:14] 2026-05-14 07:49:13,773 [wrapper] Pilot exit status: 0
[2026-05-14 03:49:14] 2026-05-14 07:49:13,856 [wrapper] pandaids: 7138266711
[2026-05-14 03:49:14] 2026-05-14 07:49:14,237 [wrapper] cleanup supervisor_pilot  158001 157996
[2026-05-14 03:49:14] 2026-05-14 07:49:14,244 [wrapper] Test setup, not cleaning
[2026-05-14 03:49:14] 2026-05-14 07:49:14,262 [wrapper] apfmon messages muted
[2026-05-14 03:49:14] 2026-05-14 07:49:14,285 [wrapper] ==== wrapper stdout END ====
[2026-05-14 03:49:14] 2026-05-14 07:49:14,306 [wrapper] ==== wrapper stderr END ====
[2026-05-14 03:49:14]  *** Error codes and diagnostics ***
[2026-05-14 03:49:14]     "exeErrorCode": 65,
[2026-05-14 03:49:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 03:49:14]     "pilotErrorCode": 1305,
[2026-05-14 03:49:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 03:49:14]  *** Listing of results directory ***
[2026-05-14 03:49:14] total 263616
[2026-05-14 03:49:14] -rwx------. 1 boincer umatlas     36281 May 14 01:58 runpilot2-wrapper.sh
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas    683926 May 14 03:24 pilot3.tar.gz
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas      5631 May 14 03:26 queuedata.json
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas       100 May 14 03:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 03:49:14] -rwxr-xr-x. 1 boincer umatlas      7986 May 14 03:33 run_atlas
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas       105 May 14 03:33 job.xml
[2026-05-14 03:49:14] -rw-r--r--. 2 boincer umatlas 265530005 May 14 03:33 EVNT.50238180._000047.pool.root.1
[2026-05-14 03:49:14] drwxrwx--x. 2 boincer umatlas      4096 May 14 03:33 shared
[2026-05-14 03:49:14] -rw-r--r--. 2 boincer umatlas    697447 May 14 03:33 input.tar.gz
[2026-05-14 03:49:14] -rw-r--r--. 2 boincer umatlas     15667 May 14 03:33 start_atlas.sh
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas         0 May 14 03:33 boinc_lockfile
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas      2562 May 14 03:33 pandaJob.out
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas        57 May 14 03:33 setup.sh.local
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas    992937 May 14 03:35 agis_schedconf.cvmfs.json
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas   1502367 May 14 03:35 agis_ddmendpoints.agis.ALL.json
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas       429 May 14 03:35 workernode_map.json
[2026-05-14 03:49:14] drwx------. 5 boincer umatlas      4096 May 14 03:36 pilot3
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas      7094 May 14 03:45 init_data.xml
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas       482 May 14 03:45 boinc_task_state.xml
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas      1012 May 14 03:46 memory_monitor_summary.json
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas     25347 May 14 03:46 log.50250204._001165.job.log.tgz.1
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas      7106 May 14 03:48 heartbeat_new.json
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas      7068 May 14 03:48 heartbeat.json
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas        95 May 14 03:48 pilot_heartbeat.json
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas      8192 May 14 03:49 boinc_mmap_file
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas      4823 May 14 03:49 pilotlog.txt
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas        23 May 14 03:49 wrapper_checkpoint.txt
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas    120451 May 14 03:49 log.50250204._001165.job.log.1
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas       188 May 14 03:49 output.list
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas       410 May 14 03:49 runtime_log
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas    163840 May 14 03:49 result.tar.gz
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas      8803 May 14 03:49 runtime_log.err
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas       640 May 14 03:49 6470b6cec40c.diag
[2026-05-14 03:49:14] -rw-r--r--. 1 boincer umatlas     22179 May 14 03:49 stderr.txt
[2026-05-14 03:49:14] No HITS result produced
[2026-05-14 03:49:14]  *** Contents of shared directory: ***
[2026-05-14 03:49:14] total 260172
[2026-05-14 03:49:14] -rw-r--r--. 2 boincer umatlas 265530005 May 14 03:33 ATLAS.root_0
[2026-05-14 03:49:14] -rw-r--r--. 2 boincer umatlas    697447 May 14 03:33 input.tar.gz
[2026-05-14 03:49:14] -rw-r--r--. 2 boincer umatlas     15667 May 14 03:33 start_atlas.sh
[2026-05-14 03:49:14] -rw-------. 1 boincer umatlas    163840 May 14 03:49 result.tar.gz
03:49:16 (151474): run_atlas exited; CPU time 50.127511
03:49:16 (151474): called boinc_finish(0)

</stderr_txt>
]]>

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