Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:04:42 (3853685): wrapper (7.7.26015): starting
09:04:42 (3853685): wrapper: running run_atlas (--nthreads 12)
[2026-05-14 09:04:42] Arguments: --nthreads 12
[2026-05-14 09:04:42] Threads: 12
[2026-05-14 09:04:42] Checking for CVMFS
[2026-05-14 09:04:42] No cvmfs_config command found, will try listing directly
[2026-05-14 09:04:42] CVMFS is ok
[2026-05-14 09:04:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 09:04:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 09:04:42] Further information can be found at the LHC@home message board.
[2026-05-14 09:04:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 09:04:42] Checking for apptainer binary...
[2026-05-14 09:04:42] which: no apptainer in ((null))
[2026-05-14 09:04:42] apptainer is not installed, using version from CVMFS
[2026-05-14 09:04:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 09:04:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-05-14 09:04:42] apptainer works
[2026-05-14 09:04:42] Set ATHENA_PROC_NUMBER=12
[2026-05-14 09:04:42] Set ATHENA_CORE_NUMBER=12
[2026-05-14 09:04:42] Starting ATLAS job with PandaID=7138716967
[2026-05-14 09:04:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 09:07:55]  *** The last 200 lines of the pilot log: ***
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | WARNING  | found no stored workdir sizes
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | WARNING  | wrong length of table data, x=[1778742307.0], y=[9480.0] (must be same and length>=4)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | could have reported an average CPU frequency of 3644 MHz (4 samples)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | ..............................
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . Timing measurements:
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . get job = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . initial setup = 3 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . payload setup = 3 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . stage-in = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . payload execution = 11 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . stage-out = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . log creation = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | ..............................
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138716967/pilotlog.txt
[2026-05-14 09:07:55] 2026-05-14 07:07:16,475 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 09:07:55] - Log from pilotlog.txt -
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | INFO     | extracted standard info from prmon json
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | WARNING  | found no stored workdir sizes
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | WARNING  | wrong length of table data, x=[1778742307.0], y=[9480.0] (must be same and length>=4)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | could have reported an average CPU frequency of 3644 MHz (4 samples)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | ..............................
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . Timing measurements:
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . get job = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . initial setup = 3 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . payload setup = 3 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . stage-in = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . payload execution = 11 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . stage-out = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . log creation = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | ..............................
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138716967/pilotlog.txt
[2026-05-14 09:07:55] 2026-05-14 07:07:16,475 | WARNING  | 
[2026-05-14 09:07:55] [begin log extracts]
[2026-05-14 09:07:55] - Log from pilotlog.txt -
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | INFO     | extracted standard info from prmon json
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | WARNING  | found no stored workdir sizes
[2026-05-14 09:07:55] 2026-05-14 07:07:16,465 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | WARNING  | wrong length of table data, x=[1778742307.0], y=[9480.0] (must be same and length>=4)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | could have reported an average CPU frequency of 3644 MHz (4 samples)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | ..............................
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . Timing measurements:
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . get job = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . initial setup = 3 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . payload setup = 3 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . stage-in = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . payload execution = 11 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . stage-out = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | . log creation = 0 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | ..............................
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 09:07:55] 2026-05-14 07:07:16,466 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138716967/pilotlog.txt
[2026-05-14 09:07:55] [end log extracts]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,476 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,476 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | 
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | job summary report
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | --------------------------------------------------
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | PanDA job id: 7138716967
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | task id: 50250192
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 09:05:12,358 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | pilot state: failed 
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | transexitcode: 65
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | exeerrorcode: 65
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | exitcode: 65
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | cpuconsumptiontime: 10 s
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | nevents: 0
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | neventsw: 0
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | pid: 3864036
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | pgrp: 3864036
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | corecount: 12
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | event service: False
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | sizes: {0: 2267517, 11: 2267517, 18: 2295047, 135: 2295185}
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | --------------------------------------------------
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | 
[2026-05-14 09:07:55] 2026-05-14 07:07:16,501 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/10
[2026-05-14 09:07:55] 2026-05-14 07:07:16,511 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | job 7138716967 has completed (purged errors)
[2026-05-14 09:07:55] 2026-05-14 07:07:16,512 | INFO     | overall cleanup function is called
[2026-05-14 09:07:55] 2026-05-14 07:07:17,518 | INFO     | --- collectZombieJob: --- 10, [3864036]
[2026-05-14 09:07:55] 2026-05-14 07:07:17,518 | INFO     | zombie collector waiting for pid 3864036
[2026-05-14 09:07:55] 2026-05-14 07:07:17,519 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 09:07:55] 2026-05-14 07:07:17,519 | INFO     | collected zombie processes
[2026-05-14 09:07:55] 2026-05-14 07:07:17,519 | INFO     | will attempt to kill all subprocesses of pid=3864036
[2026-05-14 09:07:55] 2026-05-14 07:07:17,622 | INFO     | process IDs to be killed: [3864036] (in reverse order)
[2026-05-14 09:07:55] 2026-05-14 07:07:17,680 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 09:07:55] 2026-05-14 07:07:17,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 09:07:55] 2026-05-14 07:07:17,689 | INFO     | did not find any defunct processes belonging to 3864036
[2026-05-14 09:07:55] 2026-05-14 07:07:17,694 | INFO     | did not find any defunct processes belonging to 3864036
[2026-05-14 09:07:55] 2026-05-14 07:07:17,694 | INFO     | Ready for new job
[2026-05-14 09:07:55] 2026-05-14 07:07:17,695 | INFO     | ***************************************
[2026-05-14 09:07:55] 2026-05-14 07:07:17,695 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 09:07:55] 2026-05-14 07:07:17,695 | INFO     | ***************************************
[2026-05-14 09:07:55] 2026-05-14 07:07:17,695 | INFO     | 
[2026-05-14 09:07:55] 2026-05-14 07:07:17,697 | INFO     | architecture information:
[2026-05-14 09:07:55] 2026-05-14 07:07:17,697 | INFO     | executing command: cat /etc/os-release
[2026-05-14 09:07:55] 2026-05-14 07:07:17,707 | INFO     | cat /etc/os-release:
[2026-05-14 09:07:55] NAME="CentOS Linux"
[2026-05-14 09:07:55] VERSION="7 (Core)"
[2026-05-14 09:07:55] ID="centos"
[2026-05-14 09:07:55] ID_LIKE="rhel fedora"
[2026-05-14 09:07:55] VERSION_ID="7"
[2026-05-14 09:07:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 09:07:55] ANSI_COLOR="0;31"
[2026-05-14 09:07:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 09:07:55] HOME_URL="https://www.centos.org/"
[2026-05-14 09:07:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 09:07:55] 
[2026-05-14 09:07:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 09:07:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 09:07:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 09:07:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 09:07:55] 
[2026-05-14 09:07:55] 2026-05-14 07:07:17,707 | INFO     | ***************************************
[2026-05-14 09:07:55] 2026-05-14 07:07:18,210 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/10
[2026-05-14 09:07:55] 2026-05-14 07:07:18,221 | INFO     | sufficient remaining disk space (96926171136 B)
[2026-05-14 09:07:55] 2026-05-14 07:07:18,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 09:07:55] 2026-05-14 07:07:18,221 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 09:07:55] 2026-05-14 07:07:18,222 | INFO     | update_server=False
[2026-05-14 09:07:55] 2026-05-14 07:07:18,222 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 09:07:55] 2026-05-14 07:07:18,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 09:07:55] 2026-05-14 07:07:18,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 09:07:55] 2026-05-14 07:07:18,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 09:07:55] 2026-05-14 07:07:18,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 09:07:55] 2026-05-14 07:07:18,223 | INFO     | aborting loop
[2026-05-14 09:07:55] 2026-05-14 07:07:18,715 | INFO     | all payload control threads have been joined
[2026-05-14 09:07:55] 2026-05-14 07:07:18,738 | INFO     | all data control threads have been joined
[2026-05-14 09:07:55] 2026-05-14 07:07:19,227 | INFO     | [job] retrieve thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:19,228 | INFO     | [job] queue monitor thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:19,229 | INFO     | [job] job monitor thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:19,721 | INFO     | [payload] control thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:19,725 | INFO     | [payload] validate_post thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:19,743 | INFO     | [data] control thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:19,859 | INFO     | all job control threads have been joined
[2026-05-14 09:07:55] 2026-05-14 07:07:19,981 | INFO     | [job] validate thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:20,048 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:20,091 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:20,195 | INFO     | [data] copytool_in thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:20,196 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:20,227 | INFO     | [data] copytool_out thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:20,245 | INFO     | [payload] failed_post thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:20,684 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:20,864 | INFO     | [job] control thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:22,229 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 09:07:55] 2026-05-14 07:07:49,200 | INFO     | PID=3858181 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 09:07:55] 2026-05-14 07:07:49,201 | INFO     | .. there are 9 such processes running
[2026-05-14 09:07:55] 2026-05-14 07:07:49,203 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 09:07:55] 2026-05-14 07:07:49,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 09:07:55] 2026-05-14 07:07:49,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 09:07:55] 2026-05-14 07:07:49,822 | INFO     | [monitor] cgroup control has ended
[2026-05-14 09:07:55] 2026-05-14 07:07:50,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22624869652288)>', '<ExcThread(monitor, started 22624634947328)>']
[2026-05-14 09:07:55] 2026-05-14 07:07:51,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 09:07:55] 2026-05-14 07:07:51,213 | INFO     | [monitor] control thread has ended
[2026-05-14 09:07:55] 2026-05-14 07:07:55,319 | INFO     | all workflow threads have been joined
[2026-05-14 09:07:55] 2026-05-14 07:07:55,319 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 09:07:55] 2026-05-14 07:07:55,319 | INFO     | traces error code: 0
[2026-05-14 09:07:55] 2026-05-14 07:07:55,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 09:07:55] 2026-05-14 07:07:55,385 [wrapper] ==== pilot stdout END ====
[2026-05-14 09:07:55] 2026-05-14 07:07:55,387 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 09:07:55] 2026-05-14 07:07:55,389 [wrapper] pilotpid: 3858181
[2026-05-14 09:07:55] 2026-05-14 07:07:55,390 [wrapper] Pilot exit status: 0
[2026-05-14 09:07:55] 2026-05-14 07:07:55,396 [wrapper] pandaids: 7138716967
[2026-05-14 09:07:55] 2026-05-14 07:07:55,435 [wrapper] cleanup supervisor_pilot 3858187 3858182
[2026-05-14 09:07:55] 2026-05-14 07:07:55,437 [wrapper] Test setup, not cleaning
[2026-05-14 09:07:55] 2026-05-14 07:07:55,438 [wrapper] apfmon messages muted
[2026-05-14 09:07:55] 2026-05-14 07:07:55,440 [wrapper] ==== wrapper stdout END ====
[2026-05-14 09:07:55] 2026-05-14 07:07:55,441 [wrapper] ==== wrapper stderr END ====
[2026-05-14 09:07:55]  *** Error codes and diagnostics ***
[2026-05-14 09:07:55]     "exeErrorCode": 65,
[2026-05-14 09:07:55]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 09:07:55]     "pilotErrorCode": 1305,
[2026-05-14 09:07:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 09:07:55]  *** Listing of results directory ***
[2026-05-14 09:07:55] total 103628
[2026-05-14 09:07:55] -rwx------. 1 boinc boinc     36281 May 14 05:12 runpilot2-wrapper.sh
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc    683926 May 14 06:07 pilot3.tar.gz
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc      5631 May 14 06:09 queuedata.json
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc       100 May 14 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 09:07:55] -rwxr-xr-x. 1 boinc boinc      7986 May 14 09:04 run_atlas
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc       105 May 14 09:04 job.xml
[2026-05-14 09:07:55] -rw-r--r--. 2 boinc boinc     15667 May 14 09:04 start_atlas.sh
[2026-05-14 09:07:55] drwxrwx--x. 2 boinc boinc      4096 May 14 09:04 shared
[2026-05-14 09:07:55] -rw-r--r--. 2 boinc boinc    697449 May 14 09:04 input.tar.gz
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc      6629 May 14 09:04 init_data.xml
[2026-05-14 09:07:55] -rw-r--r--. 2 boinc boinc 101804524 May 14 09:04 EVNT.50238157._000528.pool.root.1
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc         0 May 14 09:04 boinc_lockfile
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc      2562 May 14 09:04 pandaJob.out
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc    992945 May 14 09:04 agis_schedconf.cvmfs.json
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc   1502367 May 14 09:04 agis_ddmendpoints.agis.ALL.json
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc       443 May 14 09:04 workernode_map.json
[2026-05-14 09:07:55] drwx------. 5 boinc boinc      4096 May 14 09:04 pilot3
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc       959 May 14 09:05 memory_monitor_summary.json
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc     20626 May 14 09:05 log.50250192._022591.job.log.tgz.1
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc      7051 May 14 09:07 heartbeat_new.json
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc      7013 May 14 09:07 heartbeat.json
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc        95 May 14 09:07 pilot_heartbeat.json
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc       480 May 14 09:07 boinc_task_state.xml
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc        22 May 14 09:07 wrapper_checkpoint.txt
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc      8192 May 14 09:07 boinc_mmap_file
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc      4832 May 14 09:07 pilotlog.txt
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc     76027 May 14 09:07 log.50250192._022591.job.log.1
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc       188 May 14 09:07 output.list
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc       410 May 14 09:07 runtime_log
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc    112640 May 14 09:07 result.tar.gz
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc      8693 May 14 09:07 runtime_log.err
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc       646 May 14 09:07 3d8b6affe9ad.diag
[2026-05-14 09:07:55] -rw-r--r--. 1 boinc boinc     21408 May 14 09:07 stderr.txt
[2026-05-14 09:07:55] No HITS result produced
[2026-05-14 09:07:55]  *** Contents of shared directory: ***
[2026-05-14 09:07:55] total 100236
[2026-05-14 09:07:55] -rw-r--r--. 2 boinc boinc     15667 May 14 09:04 start_atlas.sh
[2026-05-14 09:07:55] -rw-r--r--. 2 boinc boinc    697449 May 14 09:04 input.tar.gz
[2026-05-14 09:07:55] -rw-r--r--. 2 boinc boinc 101804524 May 14 09:04 ATLAS.root_0
[2026-05-14 09:07:55] -rw-------. 1 boinc boinc    112640 May 14 09:07 result.tar.gz
09:07:56 (3853685): run_atlas exited; CPU time 9.561148
09:07:56 (3853685): called boinc_finish(0)

</stderr_txt>
]]>

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