Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:52:22 (1225993): wrapper (7.7.26015): starting
08:52:22 (1225993): wrapper: running run_atlas (--nthreads 4)
[2026-05-14 08:52:22] Arguments: --nthreads 4
[2026-05-14 08:52:22] Threads: 4
[2026-05-14 08:52:22] Checking for CVMFS
[2026-05-14 08:52:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 08:52:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 08:52:22] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 08:52:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 08:52:22] 2.9.2.0 1212595 3 46616 159512 0 186 36334013 36864001 0 130560 0 48409 99.966 2871 35887 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-05-14 08:52:22] CVMFS is ok
[2026-05-14 08:52:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 08:52:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 08:52:22] Further information can be found at the LHC@home message board.
[2026-05-14 08:52:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 08:52:22] Checking for apptainer binary...
[2026-05-14 08:52:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 08:52:22] Running /usr/bin/apptainer --version
[2026-05-14 08:52:22] apptainer version 1.4.1-1.1
[2026-05-14 08:52:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 08:52:22] magicA244a
[2026-05-14 08:52:22] apptainer works
[2026-05-14 08:52:22] Set ATHENA_PROC_NUMBER=4
[2026-05-14 08:52:22] Set ATHENA_CORE_NUMBER=4
[2026-05-14 08:52:22] Starting ATLAS job with PandaID=7138699110
[2026-05-14 08:52:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 08:55:58]  *** The last 200 lines of the pilot log: ***
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | found no stored workdir sizes
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | wrong length of table data, x=[1778741571.0], y=[2700.0] (must be same and length>=4)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | could have reported an average CPU frequency of 3559 MHz (4 samples)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | ..............................
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . Timing measurements:
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . get job = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . initial setup = 3 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . payload setup = 5 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . stage-in = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . payload execution = 37 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . stage-out = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . log creation = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,586 | INFO     | ..............................
[2026-05-14 08:55:58] 2026-05-14 06:55:26,586 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 08:55:58] 2026-05-14 06:55:26,586 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7138699110/pilotlog.txt
[2026-05-14 08:55:58] 2026-05-14 06:55:26,600 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 08:55:58] - Log from pilotlog.txt -
[2026-05-14 08:55:58] 2026-05-14 06:55:26,584 | INFO     | extracted standard info from prmon json
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | found no stored workdir sizes
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | wrong length of table data, x=[1778741571.0], y=[2700.0] (must be same and length>=4)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | could have reported an average CPU frequency of 3559 MHz (4 samples)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | ..............................
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . Timing measurements:
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . get job = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . initial setup = 3 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . payload setup = 5 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . stage-in = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . payload execution = 37 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . stage-out = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . log creation = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,586 | INFO     | ..............................
[2026-05-14 08:55:58] 2026-05-14 06:55:26,586 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 08:55:58] 2026-05-14 06:55:26,586 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7138699110/pilotlog.txt
[2026-05-14 08:55:58] 2026-05-14 06:55:26,600 | WARNING  | 
[2026-05-14 08:55:58] [begin log extracts]
[2026-05-14 08:55:58] - Log from pilotlog.txt -
[2026-05-14 08:55:58] 2026-05-14 06:55:26,584 | INFO     | extracted standard info from prmon json
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | found no stored workdir sizes
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | WARNING  | wrong length of table data, x=[1778741571.0], y=[2700.0] (must be same and length>=4)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | could have reported an average CPU frequency of 3559 MHz (4 samples)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | ..............................
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . Timing measurements:
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . get job = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . initial setup = 3 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . payload setup = 5 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . stage-in = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . payload execution = 37 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . stage-out = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,585 | INFO     | . log creation = 0 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,586 | INFO     | ..............................
[2026-05-14 08:55:58] 2026-05-14 06:55:26,586 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 08:55:58] 2026-05-14 06:55:26,586 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7138699110/pilotlog.txt
[2026-05-14 08:55:58] [end log extracts]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,600 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,600 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | 
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | job summary report
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | --------------------------------------------------
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | PanDA job id: 7138699110
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | task id: 50250192
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 06:53:21,221 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | pilot state: failed 
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | transexitcode: 65
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | exeerrorcode: 65
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | exitcode: 65
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | cpuconsumptiontime: 10 s
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | nevents: 0
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | neventsw: 0
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | pid: 1234291
[2026-05-14 08:55:58] 2026-05-14 06:55:26,631 | INFO     | pgrp: 1234291
[2026-05-14 08:55:58] 2026-05-14 06:55:26,632 | INFO     | corecount: 4
[2026-05-14 08:55:58] 2026-05-14 06:55:26,632 | INFO     | event service: False
[2026-05-14 08:55:58] 2026-05-14 06:55:26,632 | INFO     | sizes: {0: 2265041, 1: 2267530, 11: 2267530, 46: 2295349, 164: 2295487}
[2026-05-14 08:55:58] 2026-05-14 06:55:26,632 | INFO     | --------------------------------------------------
[2026-05-14 08:55:58] 2026-05-14 06:55:26,632 | INFO     | 
[2026-05-14 08:55:58] 2026-05-14 06:55:26,632 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-05-14 08:55:58] 2026-05-14 06:55:26,645 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,645 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,645 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,645 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | job 7138699110 has completed (purged errors)
[2026-05-14 08:55:58] 2026-05-14 06:55:26,646 | INFO     | overall cleanup function is called
[2026-05-14 08:55:58] 2026-05-14 06:55:27,652 | INFO     | --- collectZombieJob: --- 10, [1234291]
[2026-05-14 08:55:58] 2026-05-14 06:55:27,652 | INFO     | zombie collector waiting for pid 1234291
[2026-05-14 08:55:58] 2026-05-14 06:55:27,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 08:55:58] 2026-05-14 06:55:27,652 | INFO     | collected zombie processes
[2026-05-14 08:55:58] 2026-05-14 06:55:27,653 | INFO     | will attempt to kill all subprocesses of pid=1234291
[2026-05-14 08:55:58] 2026-05-14 06:55:27,686 | INFO     | process IDs to be killed: [1234291] (in reverse order)
[2026-05-14 08:55:58] 2026-05-14 06:55:27,714 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 08:55:58] 2026-05-14 06:55:27,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 08:55:58] 2026-05-14 06:55:27,715 | INFO     | did not find any defunct processes belonging to 1234291
[2026-05-14 08:55:58] 2026-05-14 06:55:27,716 | INFO     | did not find any defunct processes belonging to 1234291
[2026-05-14 08:55:58] 2026-05-14 06:55:27,716 | INFO     | Ready for new job
[2026-05-14 08:55:58] 2026-05-14 06:55:27,717 | INFO     | ***************************************
[2026-05-14 08:55:58] 2026-05-14 06:55:27,717 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 08:55:58] 2026-05-14 06:55:27,717 | INFO     | ***************************************
[2026-05-14 08:55:58] 2026-05-14 06:55:27,717 | INFO     | 
[2026-05-14 08:55:58] 2026-05-14 06:55:27,718 | INFO     | architecture information:
[2026-05-14 08:55:58] 2026-05-14 06:55:27,718 | INFO     | executing command: cat /etc/os-release
[2026-05-14 08:55:58] 2026-05-14 06:55:27,728 | INFO     | cat /etc/os-release:
[2026-05-14 08:55:58] NAME="CentOS Linux"
[2026-05-14 08:55:58] VERSION="7 (Core)"
[2026-05-14 08:55:58] ID="centos"
[2026-05-14 08:55:58] ID_LIKE="rhel fedora"
[2026-05-14 08:55:58] VERSION_ID="7"
[2026-05-14 08:55:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 08:55:58] ANSI_COLOR="0;31"
[2026-05-14 08:55:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 08:55:58] HOME_URL="https://www.centos.org/"
[2026-05-14 08:55:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 08:55:58] 
[2026-05-14 08:55:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 08:55:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 08:55:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 08:55:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 08:55:58] 
[2026-05-14 08:55:58] 2026-05-14 06:55:27,728 | INFO     | ***************************************
[2026-05-14 08:55:58] 2026-05-14 06:55:28,230 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-05-14 08:55:58] 2026-05-14 06:55:28,244 | INFO     | sufficient remaining disk space (325117280256 B)
[2026-05-14 08:55:58] 2026-05-14 06:55:28,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 08:55:58] 2026-05-14 06:55:28,244 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 08:55:58] 2026-05-14 06:55:28,244 | INFO     | update_server=False
[2026-05-14 08:55:58] 2026-05-14 06:55:28,244 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 08:55:58] 2026-05-14 06:55:28,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 08:55:58] 2026-05-14 06:55:28,245 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 08:55:58] 2026-05-14 06:55:28,245 | INFO     | aborting loop
[2026-05-14 08:55:58] 2026-05-14 06:55:28,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 08:55:58] 2026-05-14 06:55:28,671 | INFO     | all data control threads have been joined
[2026-05-14 08:55:58] 2026-05-14 06:55:29,250 | INFO     | [job] retrieve thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:29,250 | INFO     | [job] job monitor thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:29,251 | INFO     | [job] queue monitor thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:29,330 | INFO     | [data] copytool_in thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:29,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 08:55:58] 2026-05-14 06:55:29,543 | INFO     | all job control threads have been joined
[2026-05-14 08:55:58] 2026-05-14 06:55:29,677 | INFO     | [data] control thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:29,691 | INFO     | all payload control threads have been joined
[2026-05-14 08:55:58] 2026-05-14 06:55:29,821 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:29,821 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:29,902 | INFO     | [payload] failed_post thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:30,548 | INFO     | [job] control thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:30,635 | INFO     | [job] validate thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:30,683 | INFO     | [payload] validate_post thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:30,685 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:30,697 | INFO     | [payload] control thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:30,739 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:31,404 | INFO     | [data] copytool_out thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:31,753 | INFO     | [monitor] cgroup control has ended
[2026-05-14 08:55:58] 2026-05-14 06:55:32,252 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 08:55:58] 2026-05-14 06:55:33,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169405675328)>', '<ExcThread(monitor, started 140168539404032)>']
[2026-05-14 08:55:58] 2026-05-14 06:55:38,575 | INFO     | all workflow threads have been joined
[2026-05-14 08:55:58] 2026-05-14 06:55:38,575 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 08:55:58] 2026-05-14 06:55:38,576 | INFO     | traces error code: 0
[2026-05-14 08:55:58] 2026-05-14 06:55:38,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 08:55:58] 2026-05-14 06:55:58,659 | INFO     | PID=1229781 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 08:55:58] 2026-05-14 06:55:58,660 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 08:55:58] 2026-05-14 06:55:58,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 08:55:58] 2026-05-14 06:55:58,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 08:55:58] 2026-05-14 06:55:58,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 08:55:58] 2026-05-14 06:55:58,660 | INFO     | [monitor] control thread has ended
[2026-05-14 08:55:58] 2026-05-14 06:55:58,707 [wrapper] ==== pilot stdout END ====
[2026-05-14 08:55:58] 2026-05-14 06:55:58,711 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 08:55:58] 2026-05-14 06:55:58,713 [wrapper] pilotpid: 1229781
[2026-05-14 08:55:58] 2026-05-14 06:55:58,716 [wrapper] Pilot exit status: 0
[2026-05-14 08:55:58] 2026-05-14 06:55:58,724 [wrapper] pandaids: 7138699110
[2026-05-14 08:55:58] 2026-05-14 06:55:58,741 [wrapper] cleanup supervisor_pilot 1229787 1229782
[2026-05-14 08:55:58] 2026-05-14 06:55:58,744 [wrapper] Test setup, not cleaning
[2026-05-14 08:55:58] 2026-05-14 06:55:58,746 [wrapper] apfmon messages muted
[2026-05-14 08:55:58] 2026-05-14 06:55:58,749 [wrapper] ==== wrapper stdout END ====
[2026-05-14 08:55:58] 2026-05-14 06:55:58,752 [wrapper] ==== wrapper stderr END ====
[2026-05-14 08:55:58]  *** Error codes and diagnostics ***
[2026-05-14 08:55:58]     "exeErrorCode": 65,
[2026-05-14 08:55:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 08:55:58]     "pilotErrorCode": 1305,
[2026-05-14 08:55:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 08:55:58]  *** Listing of results directory ***
[2026-05-14 08:55:58] total 103804
[2026-05-14 08:55:58] -rwx------ 1 boinc boinc     36281 May 14 05:08 runpilot2-wrapper.sh
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc      5631 May 14 06:07 queuedata.json
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc    683926 May 14 06:07 pilot3.tar.gz
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc       100 May 14 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 08:55:58] -rwxr-xr-x 1 boinc boinc      7986 May 14 08:52 run_atlas
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc       105 May 14 08:52 job.xml
[2026-05-14 08:55:58] -rw-r--r-- 2 boinc boinc 101986831 May 14 08:52 EVNT.50238157._000061.pool.root.1
[2026-05-14 08:55:58] -rw-r--r-- 2 boinc boinc    697444 May 14 08:52 input.tar.gz
[2026-05-14 08:55:58] -rw-r--r-- 2 boinc boinc     15667 May 14 08:52 start_atlas.sh
[2026-05-14 08:55:58] drwxrwx--x 2 boinc boinc      4096 May 14 08:52 shared
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc         0 May 14 08:52 boinc_setup_complete
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc      6352 May 14 08:52 init_data.xml
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc         0 May 14 08:52 boinc_lockfile
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc      2559 May 14 08:52 pandaJob.out
[2026-05-14 08:55:58] -rw------- 1 boinc boinc    992945 May 14 08:52 agis_schedconf.cvmfs.json
[2026-05-14 08:55:58] -rw------- 1 boinc boinc   1502367 May 14 08:52 agis_ddmendpoints.agis.ALL.json
[2026-05-14 08:55:58] -rw------- 1 boinc boinc       421 May 14 08:52 workernode_map.json
[2026-05-14 08:55:58] drwx------ 5 boinc boinc      4096 May 14 08:52 pilot3
[2026-05-14 08:55:58] -rw------- 1 boinc boinc       964 May 14 08:53 memory_monitor_summary.json
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc       480 May 14 08:53 boinc_task_state.xml
[2026-05-14 08:55:58] -rw------- 1 boinc boinc     21121 May 14 08:53 log.50250192._021777.job.log.tgz.1
[2026-05-14 08:55:58] -rw------- 1 boinc boinc      7050 May 14 08:55 heartbeat_new.json
[2026-05-14 08:55:58] -rw------- 1 boinc boinc      7012 May 14 08:55 heartbeat.json
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc        22 May 14 08:55 wrapper_checkpoint.txt
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc      8192 May 14 08:55 boinc_mmap_file
[2026-05-14 08:55:58] -rw------- 1 boinc boinc       747 May 14 08:55 pilotlog.txt
[2026-05-14 08:55:58] -rw------- 1 boinc boinc        95 May 14 08:55 pilot_heartbeat.json
[2026-05-14 08:55:58] -rw------- 1 boinc boinc     75353 May 14 08:55 log.50250192._021777.job.log.1
[2026-05-14 08:55:58] -rw------- 1 boinc boinc       188 May 14 08:55 output.list
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc       410 May 14 08:55 runtime_log
[2026-05-14 08:55:58] -rw------- 1 boinc boinc    112640 May 14 08:55 result.tar.gz
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc      8386 May 14 08:55 runtime_log.err
[2026-05-14 08:55:58] -rw------- 1 boinc boinc       651 May 14 08:55 3cc7138f09ed.diag
[2026-05-14 08:55:58] -rw-r--r-- 1 boinc boinc     21598 May 14 08:55 stderr.txt
[2026-05-14 08:55:58] No HITS result produced
[2026-05-14 08:55:58]  *** Contents of shared directory: ***
[2026-05-14 08:55:58] total 100416
[2026-05-14 08:55:58] -rw-r--r-- 2 boinc boinc 101986831 May 14 08:52 ATLAS.root_0
[2026-05-14 08:55:58] -rw-r--r-- 2 boinc boinc    697444 May 14 08:52 input.tar.gz
[2026-05-14 08:55:58] -rw-r--r-- 2 boinc boinc     15667 May 14 08:52 start_atlas.sh
[2026-05-14 08:55:58] -rw------- 1 boinc boinc    112640 May 14 08:55 result.tar.gz
08:56:00 (1225993): run_atlas exited; CPU time 9.859142
08:56:00 (1225993): called boinc_finish(0)

</stderr_txt>
]]>

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