Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:29:06 (2536521): wrapper (7.7.26015): starting
11:29:06 (2536521): wrapper: running run_atlas (--nthreads 12)
[2026-05-14 11:29:06] Arguments: --nthreads 12
[2026-05-14 11:29:06] Threads: 12
[2026-05-14 11:29:06] Checking for CVMFS
[2026-05-14 11:29:06] No cvmfs_config command found, will try listing directly
[2026-05-14 11:29:06] CVMFS is ok
[2026-05-14 11:29:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 11:29:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 11:29:06] Further information can be found at the LHC@home message board.
[2026-05-14 11:29:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 11:29:06] Checking for apptainer binary...
[2026-05-14 11:29:06] which: no apptainer in ((null))
[2026-05-14 11:29:06] apptainer is not installed, using version from CVMFS
[2026-05-14 11:29:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 11:29:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-05-14 11:29:06] apptainer works
[2026-05-14 11:29:06] Set ATHENA_PROC_NUMBER=12
[2026-05-14 11:29:06] Set ATHENA_CORE_NUMBER=12
[2026-05-14 11:29:06] Starting ATLAS job with PandaID=7138269134
[2026-05-14 11:29:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 11:47:38]  *** The last 200 lines of the pilot log: ***
[2026-05-14 11:47:38]  guid=f8fd415c-b9f9-4939-8167-56d417ffced6
[2026-05-14 11:47:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-14 11:47:38]  is_altstaged=None
[2026-05-14 11:47:38]  is_tar=False
[2026-05-14 11:47:38]  lfn=log.50087078._004720.job.log.tgz.1
[2026-05-14 11:47:38]  mtime=0
[2026-05-14 11:47:38]  protocol_id=None
[2026-05-14 11:47:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-14 11:47:38]  replicas=None
[2026-05-14 11:47:38]  scope=mc23_13p6TeV
[2026-05-14 11:47:38]  status=None
[2026-05-14 11:47:38]  status_code=0
[2026-05-14 11:47:38]  storage_token=
[2026-05-14 11:47:38]  surl=/var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269134/log.50087078._004720.job.log.tgz.1
[2026-05-14 11:47:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/40/log.50087078._004720.job.log.tgz.1
[2026-05-14 11:47:38]  workdir=None
[2026-05-14 11:47:38] ]
[2026-05-14 11:47:38] 2026-05-14 09:47:01,968 | INFO     | transferring file log.50087078._004720.job.log.tgz.1 from /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269134/log.50087078._004720.job.log.tgz.1 to /var/lib/
[2026-05-14 11:47:38] 2026-05-14 09:47:01,968 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269134/log.50087078._004720.job.log.tgz.1 /var/lib/boinc/var/slot36/slots/10/
[2026-05-14 11:47:38] 2026-05-14 09:47:01,977 | INFO     | adding to output.list: log.50087078._004720.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/40/log.50087078._004720.job.log.tg
[2026-05-14 11:47:38] 2026-05-14 09:47:01,977 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-14 11:47:38] 2026-05-14 09:47:01,977 | INFO     | summary of transferred files:
[2026-05-14 11:47:38] 2026-05-14 09:47:01,977 | INFO     |  -- lfn=log.50087078._004720.job.log.tgz.1, status_code=0, status=transferred
[2026-05-14 11:47:38] 2026-05-14 09:47:01,978 | INFO     | stage-out finished correctly
[2026-05-14 11:47:38] 2026-05-14 09:47:02,179 | INFO     | PID=2541018 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 11:47:38] 2026-05-14 09:47:02,180 | INFO     | .. there are 10 such processes running
[2026-05-14 11:47:38] 2026-05-14 09:47:02,826 | INFO     | monitor loop #87: job 0:7138269134 is in state 'finished'
[2026-05-14 11:47:38] 2026-05-14 09:47:02,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-14 11:47:38] 2026-05-14 09:47:03,750 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-14 11:47:38] 2026-05-14 09:47:05,329 | INFO     | monitor loop #88: job 0:7138269134 is in state 'finished'
[2026-05-14 11:47:38] 2026-05-14 09:47:05,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-14 11:47:38] 2026-05-14 09:47:06,190 | INFO     | job 7138269134 has state=finished
[2026-05-14 11:47:38] 2026-05-14 09:47:06,190 | INFO     | preparing for final server update for job 7138269134 in state='finished'
[2026-05-14 11:47:38] 2026-05-14 09:47:06,190 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269134/jobReport.json
[2026-05-14 11:47:38] 2026-05-14 09:47:06,192 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/10/workernode_map.json
[2026-05-14 11:47:38] 2026-05-14 09:47:06,192 | INFO     | this job has now completed (state=finished)
[2026-05-14 11:47:38] 2026-05-14 09:47:06,192 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-14 11:47:38] 2026-05-14 09:47:06,192 | INFO     | log transfer has been attempted: DONE
[2026-05-14 11:47:38] 2026-05-14 09:47:06,192 | INFO     | job 7138269134 has finished - writing final server update
[2026-05-14 11:47:38] 2026-05-14 09:47:06,192 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1708266/.job.ad'
[2026-05-14 11:47:38] 2026-05-14 09:47:06,192 | INFO     | total number of processed events: 400 (read)
[2026-05-14 11:47:38] 2026-05-14 09:47:06,201 | INFO     | using path: /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269134/memory_monitor_summary.json (trf name=prmon)
[2026-05-14 11:47:38] 2026-05-14 09:47:06,201 | INFO     | extracted standard info from prmon json
[2026-05-14 11:47:38] 2026-05-14 09:47:06,201 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 11:47:38] 2026-05-14 09:47:06,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 11:47:38] 2026-05-14 09:47:06,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | fitting pss+swap vs Time
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | sum of square deviations: 409310.0
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | sum of deviations: 4330512.0
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | mean x (centered): 0.0
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | mean y: 2744726.909090909
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | intersect: 2744726.909090909
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | chi2: 9.392159731925844e-05
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | current memory leak: 10.58 B/s (using 11 data points, chi2=0.00)
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | could have reported an average CPU frequency of 3678 MHz (4 samples)
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | ..............................
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | . Timing measurements:
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | . get job = 0 s
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | . initial setup = 3 s
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | . payload setup = 4 s
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | . stage-in = 0 s
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | . payload execution = 1048 s
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | . stage-out = 0 s
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | . log creation = 0 s
[2026-05-14 11:47:38] 2026-05-14 09:47:06,202 | INFO     | ..............................
[2026-05-14 11:47:38] 2026-05-14 09:47:06,225 | INFO     | 
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | job summary report
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | --------------------------------------------------
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | PanDA job id: 7138269134
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | task id: 50087078
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | errors: (none)
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | pilot state: finished 
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | transexitcode: 0
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | exeerrorcode: 0
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | exeerrordiag: 
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | exitcode: 0
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | exitmsg: OK
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | cpuconsumptiontime: 10950 s
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | nevents: 400
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | neventsw: 0
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | pid: 2546608
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | pgrp: 2546608
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | corecount: 12
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | event service: False
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | sizes: {0: 2265739, 1: 2267483, 11: 2267511, 1055: 2292097, 1057: 2301119, 1059: 2301175, 1061: 2301497}
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | --------------------------------------------------
[2026-05-14 11:47:38] 2026-05-14 09:47:06,226 | INFO     | 
[2026-05-14 11:47:38] 2026-05-14 09:47:06,227 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/10
[2026-05-14 11:47:38] 2026-05-14 09:47:06,237 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | job 7138269134 has completed (purged errors)
[2026-05-14 11:47:38] 2026-05-14 09:47:06,238 | INFO     | overall cleanup function is called
[2026-05-14 11:47:38] 2026-05-14 09:47:07,245 | INFO     | --- collectZombieJob: --- 10, [2546608]
[2026-05-14 11:47:38] 2026-05-14 09:47:07,245 | INFO     | zombie collector waiting for pid 2546608
[2026-05-14 11:47:38] 2026-05-14 09:47:07,245 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 11:47:38] 2026-05-14 09:47:07,245 | INFO     | collected zombie processes
[2026-05-14 11:47:38] 2026-05-14 09:47:07,245 | INFO     | will attempt to kill all subprocesses of pid=2546608
[2026-05-14 11:47:38] 2026-05-14 09:47:07,353 | INFO     | process IDs to be killed: [2546608] (in reverse order)
[2026-05-14 11:47:38] 2026-05-14 09:47:07,408 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 11:47:38] 2026-05-14 09:47:07,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 11:47:38] 2026-05-14 09:47:07,417 | INFO     | did not find any defunct processes belonging to 2546608
[2026-05-14 11:47:38] 2026-05-14 09:47:07,421 | INFO     | did not find any defunct processes belonging to 2546608
[2026-05-14 11:47:38] 2026-05-14 09:47:07,421 | INFO     | Ready for new job
[2026-05-14 11:47:38] 2026-05-14 09:47:07,422 | INFO     | ***************************************
[2026-05-14 11:47:38] 2026-05-14 09:47:07,423 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 11:47:38] 2026-05-14 09:47:07,423 | INFO     | ***************************************
[2026-05-14 11:47:38] 2026-05-14 09:47:07,423 | INFO     | 
[2026-05-14 11:47:38] 2026-05-14 09:47:07,426 | INFO     | architecture information:
[2026-05-14 11:47:38] 2026-05-14 09:47:07,426 | INFO     | executing command: cat /etc/os-release
[2026-05-14 11:47:38] 2026-05-14 09:47:07,436 | INFO     | cat /etc/os-release:
[2026-05-14 11:47:38] NAME="CentOS Linux"
[2026-05-14 11:47:38] VERSION="7 (Core)"
[2026-05-14 11:47:38] ID="centos"
[2026-05-14 11:47:38] ID_LIKE="rhel fedora"
[2026-05-14 11:47:38] VERSION_ID="7"
[2026-05-14 11:47:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 11:47:38] ANSI_COLOR="0;31"
[2026-05-14 11:47:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 11:47:38] HOME_URL="https://www.centos.org/"
[2026-05-14 11:47:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 11:47:38] 
[2026-05-14 11:47:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 11:47:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 11:47:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 11:47:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 11:47:38] 
[2026-05-14 11:47:38] 2026-05-14 09:47:07,436 | INFO     | ***************************************
[2026-05-14 11:47:38] 2026-05-14 09:47:07,939 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/10
[2026-05-14 11:47:38] 2026-05-14 09:47:07,950 | INFO     | sufficient remaining disk space (208898359296 B)
[2026-05-14 11:47:38] 2026-05-14 09:47:07,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 11:47:38] 2026-05-14 09:47:07,950 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 11:47:38] 2026-05-14 09:47:07,950 | INFO     | update_server=False
[2026-05-14 11:47:38] 2026-05-14 09:47:07,950 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 11:47:38] 2026-05-14 09:47:07,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 11:47:38] 2026-05-14 09:47:07,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 11:47:38] 2026-05-14 09:47:08,747 | INFO     | all data control threads have been joined
[2026-05-14 11:47:38] 2026-05-14 09:47:08,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 11:47:38] 2026-05-14 09:47:08,838 | INFO     | aborting loop
[2026-05-14 11:47:38] 2026-05-14 09:47:08,955 | INFO     | [job] retrieve thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:08,956 | INFO     | [job] queue monitor thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:09,073 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:09,174 | INFO     | [payload] failed_post thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:09,285 | INFO     | all payload control threads have been joined
[2026-05-14 11:47:38] 2026-05-14 09:47:09,487 | INFO     | all job control threads have been joined
[2026-05-14 11:47:38] 2026-05-14 09:47:09,702 | INFO     | [payload] validate_post thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:09,753 | INFO     | [data] control thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:09,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 11:47:38] 2026-05-14 09:47:09,843 | INFO     | [job] job monitor thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:09,956 | INFO     | [data] copytool_out thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:10,044 | INFO     | [job] validate thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:10,069 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:10,122 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:10,256 | INFO     | [data] copytool_in thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:10,291 | INFO     | [payload] control thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:10,493 | INFO     | [job] control thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:13,800 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:15,700 | INFO     | [monitor] cgroup control has ended
[2026-05-14 11:47:38] 2026-05-14 09:47:18,957 | INFO     | job.realtimelogging is not enabled
[2026-05-14 11:47:38] 2026-05-14 09:47:19,963 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 11:47:38] 2026-05-14 09:47:20,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22817571600192)>', '<ExcThread(monitor, started 22817265383168)>']
[2026-05-14 11:47:38] 2026-05-14 09:47:25,945 | INFO     | all workflow threads have been joined
[2026-05-14 11:47:38] 2026-05-14 09:47:25,945 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 11:47:38] 2026-05-14 09:47:25,945 | INFO     | traces error code: 0
[2026-05-14 11:47:38] 2026-05-14 09:47:25,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 11:47:38] 2026-05-14 09:47:38,421 | INFO     | PID=2541018 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 11:47:38] 2026-05-14 09:47:38,422 | INFO     | .. there are 9 such processes running
[2026-05-14 11:47:38] 2026-05-14 09:47:38,423 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 11:47:38] 2026-05-14 09:47:38,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 11:47:38] 2026-05-14 09:47:38,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 11:47:38] 2026-05-14 09:47:38,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 11:47:38] 2026-05-14 09:47:38,423 | INFO     | [monitor] control thread has ended
[2026-05-14 11:47:38] 2026-05-14 09:47:38,484 [wrapper] ==== pilot stdout END ====
[2026-05-14 11:47:38] 2026-05-14 09:47:38,486 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 11:47:38] 2026-05-14 09:47:38,488 [wrapper] pilotpid: 2541018
[2026-05-14 11:47:38] 2026-05-14 09:47:38,489 [wrapper] Pilot exit status: 0
[2026-05-14 11:47:38] 2026-05-14 09:47:38,495 [wrapper] pandaids: 7138269134
[2026-05-14 11:47:38] 2026-05-14 09:47:38,532 [wrapper] cleanup supervisor_pilot 2916782 2541019
[2026-05-14 11:47:38] 2026-05-14 09:47:38,534 [wrapper] Test setup, not cleaning
[2026-05-14 11:47:38] 2026-05-14 09:47:38,536 [wrapper] apfmon messages muted
[2026-05-14 11:47:38] 2026-05-14 09:47:38,537 [wrapper] ==== wrapper stdout END ====
[2026-05-14 11:47:38] 2026-05-14 09:47:38,538 [wrapper] ==== wrapper stderr END ====
[2026-05-14 11:47:38]  *** Error codes and diagnostics ***
[2026-05-14 11:47:38]     "exeErrorCode": 0,
[2026-05-14 11:47:38]     "pilotErrorCode": 0,
[2026-05-14 11:47:38]  *** Listing of results directory ***
[2026-05-14 11:47:38] total 616360
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc    683926 May 14 07:55 pilot3.tar.gz
[2026-05-14 11:47:38] -rwx------. 1 boinc boinc     36281 May 14 07:58 runpilot2-wrapper.sh
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc      5631 May 14 08:08 queuedata.json
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc       100 May 14 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 11:47:38] -rwxr-xr-x. 1 boinc boinc      7986 May 14 11:29 run_atlas
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc       105 May 14 11:29 job.xml
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc      6629 May 14 11:29 init_data.xml
[2026-05-14 11:47:38] -rw-r--r--. 2 boinc boinc 443516578 May 14 11:29 EVNT.46701437._000745.pool.root.1
[2026-05-14 11:47:38] -rw-r--r--. 2 boinc boinc     15667 May 14 11:29 start_atlas.sh
[2026-05-14 11:47:38] drwxrwx--x. 2 boinc boinc      4096 May 14 11:29 shared
[2026-05-14 11:47:38] -rw-r--r--. 2 boinc boinc    697420 May 14 11:29 input.tar.gz
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc         0 May 14 11:29 boinc_lockfile
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc      2564 May 14 11:29 pandaJob.out
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc    992747 May 14 11:29 agis_schedconf.cvmfs.json
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc   1502367 May 14 11:29 agis_ddmendpoints.agis.ALL.json
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc       444 May 14 11:29 workernode_map.json
[2026-05-14 11:47:38] drwx------. 5 boinc boinc      4096 May 14 11:29 pilot3
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc 182533897 May 14 11:46 HITS.50087078._004720.pool.root.1
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc       488 May 14 11:46 boinc_task_state.xml
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc      1024 May 14 11:46 memory_monitor_summary.json
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc    336335 May 14 11:47 log.50087078._004720.job.log.tgz.1
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc      6375 May 14 11:47 heartbeat_new.json
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc      6266 May 14 11:47 heartbeat.json
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc        27 May 14 11:47 wrapper_checkpoint.txt
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc      8192 May 14 11:47 boinc_mmap_file
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc       822 May 14 11:47 pilotlog.txt
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc        95 May 14 11:47 pilot_heartbeat.json
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc    153376 May 14 11:47 log.50087078._004720.job.log.1
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc       357 May 14 11:47 output.list
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc       410 May 14 11:47 runtime_log
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc    512000 May 14 11:47 result.tar.gz
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc      8846 May 14 11:47 runtime_log.err
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc       656 May 14 11:47 64a17a946647.diag
[2026-05-14 11:47:38] -rw-r--r--. 1 boinc boinc     21271 May 14 11:47 stderr.txt
[2026-05-14 11:47:38] HITS file was successfully produced:
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc 182533897 May 14 11:46 shared/HITS.pool.root.1
[2026-05-14 11:47:38]  *** Contents of shared directory: ***
[2026-05-14 11:47:38] total 612588
[2026-05-14 11:47:38] -rw-r--r--. 2 boinc boinc 443516578 May 14 11:29 ATLAS.root_0
[2026-05-14 11:47:38] -rw-r--r--. 2 boinc boinc     15667 May 14 11:29 start_atlas.sh
[2026-05-14 11:47:38] -rw-r--r--. 2 boinc boinc    697420 May 14 11:29 input.tar.gz
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc 182533897 May 14 11:46 HITS.pool.root.1
[2026-05-14 11:47:38] -rw-------. 1 boinc boinc    512000 May 14 11:47 result.tar.gz
11:47:40 (2536521): run_atlas exited; CPU time 10954.249346
11:47:40 (2536521): called boinc_finish(0)

</stderr_txt>
]]>

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