Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:14:22 (1079478): wrapper (7.7.26015): starting
10:14:22 (1079478): wrapper: running run_atlas (--nthreads 12)
[2026-05-14 10:14:22] Arguments: --nthreads 12
[2026-05-14 10:14:22] Threads: 12
[2026-05-14 10:14:22] Checking for CVMFS
[2026-05-14 10:14:22] No cvmfs_config command found, will try listing directly
[2026-05-14 10:14:22] CVMFS is ok
[2026-05-14 10:14:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 10:14:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 10:14:22] Further information can be found at the LHC@home message board.
[2026-05-14 10:14:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 10:14:22] Checking for apptainer binary...
[2026-05-14 10:14:22] which: no apptainer in ((null))
[2026-05-14 10:14:22] apptainer is not installed, using version from CVMFS
[2026-05-14 10:14:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 10:14:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-05-14 10:14:22] apptainer works
[2026-05-14 10:14:22] Set ATHENA_PROC_NUMBER=12
[2026-05-14 10:14:22] Set ATHENA_CORE_NUMBER=12
[2026-05-14 10:14:22] Starting ATLAS job with PandaID=7138269116
[2026-05-14 10:14:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 10:32:35]  *** The last 200 lines of the pilot log: ***
[2026-05-14 10:32:35]  filesize=314111
[2026-05-14 10:32:35]  filetype=log
[2026-05-14 10:32:35]  guid=7cd37508-4ab0-4593-933f-709bd66fd044
[2026-05-14 10:32:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-14 10:32:35]  is_altstaged=None
[2026-05-14 10:32:35]  is_tar=False
[2026-05-14 10:32:35]  lfn=log.50087078._004702.job.log.tgz.1
[2026-05-14 10:32:35]  mtime=0
[2026-05-14 10:32:35]  protocol_id=None
[2026-05-14 10:32:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-14 10:32:35]  replicas=None
[2026-05-14 10:32:35]  scope=mc23_13p6TeV
[2026-05-14 10:32:35]  status=None
[2026-05-14 10:32:35]  status_code=0
[2026-05-14 10:32:35]  storage_token=
[2026-05-14 10:32:35]  surl=/var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269116/log.50087078._004702.job.log.tgz.1
[2026-05-14 10:32:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/72/log.50087078._004702.job.log.tgz.1
[2026-05-14 10:32:35]  workdir=None
[2026-05-14 10:32:35] ]
[2026-05-14 10:32:35] 2026-05-14 08:31:53,842 | INFO     | transferring file log.50087078._004702.job.log.tgz.1 from /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269116/log.50087078._004702.job.log.tgz.1 to /var/lib/
[2026-05-14 10:32:35] 2026-05-14 08:31:53,842 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269116/log.50087078._004702.job.log.tgz.1 /var/lib/boinc/var/slot36/slots/10/
[2026-05-14 10:32:35] 2026-05-14 08:31:53,853 | INFO     | adding to output.list: log.50087078._004702.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/72/log.50087078._004702.job.log.tg
[2026-05-14 10:32:35] 2026-05-14 08:31:53,853 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-14 10:32:35] 2026-05-14 08:31:53,853 | INFO     | summary of transferred files:
[2026-05-14 10:32:35] 2026-05-14 08:31:53,853 | INFO     |  -- lfn=log.50087078._004702.job.log.tgz.1, status_code=0, status=transferred
[2026-05-14 10:32:35] 2026-05-14 08:31:53,853 | INFO     | stage-out finished correctly
[2026-05-14 10:32:35] 2026-05-14 08:31:54,491 | WARNING  | process 1089585 can no longer be monitored (due to stat problems) - aborting
[2026-05-14 10:32:35] 2026-05-14 08:31:54,491 | INFO     | using path: /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269116/memory_monitor_summary.json (trf name=prmon)
[2026-05-14 10:32:35] 2026-05-14 08:31:54,592 | INFO     | number of running child processes to parent process 1089585: 1
[2026-05-14 10:32:35] 2026-05-14 08:31:54,592 | INFO     | maximum number of monitored processes: 6
[2026-05-14 10:32:35] 2026-05-14 08:31:55,614 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-14 10:32:35] 2026-05-14 08:31:56,590 | INFO     | job 7138269116 has state=finished
[2026-05-14 10:32:35] 2026-05-14 08:31:56,590 | INFO     | preparing for final server update for job 7138269116 in state='finished'
[2026-05-14 10:32:35] 2026-05-14 08:31:56,590 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269116/jobReport.json
[2026-05-14 10:32:35] 2026-05-14 08:31:56,592 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/10/workernode_map.json
[2026-05-14 10:32:35] 2026-05-14 08:31:56,592 | INFO     | this job has now completed (state=finished)
[2026-05-14 10:32:35] 2026-05-14 08:31:56,592 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-14 10:32:35] 2026-05-14 08:31:56,592 | INFO     | log transfer has been attempted: DONE
[2026-05-14 10:32:35] 2026-05-14 08:31:56,592 | INFO     | job 7138269116 has finished - writing final server update
[2026-05-14 10:32:35] 2026-05-14 08:31:56,592 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1708266/.job.ad'
[2026-05-14 10:32:35] 2026-05-14 08:31:56,592 | INFO     | total number of processed events: 400 (read)
[2026-05-14 10:32:35] 2026-05-14 08:31:56,601 | INFO     | using path: /var/lib/boinc/var/slot36/slots/10/PanDA_Pilot-7138269116/memory_monitor_summary.json (trf name=prmon)
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | INFO     | extracted standard info from prmon json
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | INFO     | fitting pss+swap vs Time
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | INFO     | sum of square deviations: 306982.5
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | INFO     | sum of deviations: 8885626.0
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | INFO     | mean x (centered): 0.0
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | INFO     | mean y: 2744410.8
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | INFO     | intersect: 2744410.8
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | INFO     | chi2: 0.00013079338616281595
[2026-05-14 10:32:35] 2026-05-14 08:31:56,602 | INFO     | current memory leak: 28.95 B/s (using 10 data points, chi2=0.00)
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | could have reported an average CPU frequency of 3509 MHz (4 samples)
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | ..............................
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | . Timing measurements:
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | . get job = 0 s
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | . initial setup = 2 s
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | . payload setup = 3 s
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | . stage-in = 0 s
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | . payload execution = 1025 s
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | . stage-out = 0 s
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | . log creation = 0 s
[2026-05-14 10:32:35] 2026-05-14 08:31:56,603 | INFO     | ..............................
[2026-05-14 10:32:35] 2026-05-14 08:31:56,629 | INFO     | 
[2026-05-14 10:32:35] 2026-05-14 08:31:56,629 | INFO     | job summary report
[2026-05-14 10:32:35] 2026-05-14 08:31:56,629 | INFO     | --------------------------------------------------
[2026-05-14 10:32:35] 2026-05-14 08:31:56,629 | INFO     | PanDA job id: 7138269116
[2026-05-14 10:32:35] 2026-05-14 08:31:56,629 | INFO     | task id: 50087078
[2026-05-14 10:32:35] 2026-05-14 08:31:56,629 | INFO     | errors: (none)
[2026-05-14 10:32:35] 2026-05-14 08:31:56,629 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 10:32:35] 2026-05-14 08:31:56,629 | INFO     | pilot state: finished 
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | transexitcode: 0
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | exeerrorcode: 0
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | exeerrordiag: 
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | exitcode: 0
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | exitmsg: OK
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | cpuconsumptiontime: 10965 s
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | nevents: 400
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | neventsw: 0
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | pid: 1089585
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | pgrp: 1089585
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | corecount: 12
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | event service: False
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | sizes: {0: 2267481, 10: 2267481, 1033: 2292066, 1035: 2301088, 1036: 2301144, 1037: 2301338}
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | --------------------------------------------------
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | 
[2026-05-14 10:32:35] 2026-05-14 08:31:56,630 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/10
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,640 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 10:32:35] 2026-05-14 08:31:56,641 | INFO     | job 7138269116 has completed (purged errors)
[2026-05-14 10:32:35] 2026-05-14 08:31:56,641 | INFO     | overall cleanup function is called
[2026-05-14 10:32:35] 2026-05-14 08:31:57,647 | INFO     | --- collectZombieJob: --- 10, [1089585]
[2026-05-14 10:32:35] 2026-05-14 08:31:57,647 | INFO     | zombie collector waiting for pid 1089585
[2026-05-14 10:32:35] 2026-05-14 08:31:57,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 10:32:35] 2026-05-14 08:31:57,647 | INFO     | collected zombie processes
[2026-05-14 10:32:35] 2026-05-14 08:31:57,647 | INFO     | will attempt to kill all subprocesses of pid=1089585
[2026-05-14 10:32:35] 2026-05-14 08:31:57,754 | INFO     | process IDs to be killed: [1089585] (in reverse order)
[2026-05-14 10:32:35] 2026-05-14 08:31:57,817 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 10:32:35] 2026-05-14 08:31:57,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 10:32:35] 2026-05-14 08:31:57,827 | INFO     | did not find any defunct processes belonging to 1089585
[2026-05-14 10:32:35] 2026-05-14 08:31:57,831 | INFO     | did not find any defunct processes belonging to 1089585
[2026-05-14 10:32:35] 2026-05-14 08:31:57,832 | INFO     | Ready for new job
[2026-05-14 10:32:35] 2026-05-14 08:31:57,832 | INFO     | ***************************************
[2026-05-14 10:32:35] 2026-05-14 08:31:57,832 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 10:32:35] 2026-05-14 08:31:57,832 | INFO     | ***************************************
[2026-05-14 10:32:35] 2026-05-14 08:31:57,832 | INFO     | 
[2026-05-14 10:32:35] 2026-05-14 08:31:57,835 | INFO     | architecture information:
[2026-05-14 10:32:35] 2026-05-14 08:31:57,835 | INFO     | executing command: cat /etc/os-release
[2026-05-14 10:32:35] 2026-05-14 08:31:57,841 | INFO     | cat /etc/os-release:
[2026-05-14 10:32:35] NAME="CentOS Linux"
[2026-05-14 10:32:35] VERSION="7 (Core)"
[2026-05-14 10:32:35] ID="centos"
[2026-05-14 10:32:35] ID_LIKE="rhel fedora"
[2026-05-14 10:32:35] VERSION_ID="7"
[2026-05-14 10:32:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 10:32:35] ANSI_COLOR="0;31"
[2026-05-14 10:32:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 10:32:35] HOME_URL="https://www.centos.org/"
[2026-05-14 10:32:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 10:32:35] 
[2026-05-14 10:32:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 10:32:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 10:32:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 10:32:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 10:32:35] 
[2026-05-14 10:32:35] 2026-05-14 08:31:57,841 | INFO     | ***************************************
[2026-05-14 10:32:35] 2026-05-14 08:31:58,344 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/10
[2026-05-14 10:32:35] 2026-05-14 08:31:58,356 | INFO     | sufficient remaining disk space (159596412928 B)
[2026-05-14 10:32:35] 2026-05-14 08:31:58,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 10:32:35] 2026-05-14 08:31:58,356 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 10:32:35] 2026-05-14 08:31:58,356 | INFO     | update_server=False
[2026-05-14 10:32:35] 2026-05-14 08:31:58,356 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 10:32:35] 2026-05-14 08:31:58,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 10:32:35] 2026-05-14 08:31:58,357 | INFO     | aborting loop
[2026-05-14 10:32:35] 2026-05-14 08:31:58,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 10:32:35] 2026-05-14 08:31:58,816 | INFO     | job.realtimelogging is not enabled
[2026-05-14 10:32:35] 2026-05-14 08:31:58,855 | INFO     | all data control threads have been joined
[2026-05-14 10:32:35] 2026-05-14 08:31:59,362 | INFO     | [job] retrieve thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:31:59,362 | INFO     | [job] job monitor thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:31:59,363 | INFO     | [job] queue monitor thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:31:59,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 10:32:35] 2026-05-14 08:31:59,425 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:31:59,480 | INFO     | [payload] failed_post thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:31:59,502 | INFO     | all payload control threads have been joined
[2026-05-14 10:32:35] 2026-05-14 08:31:59,821 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:31:59,861 | INFO     | [data] control thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:31:59,961 | INFO     | all job control threads have been joined
[2026-05-14 10:32:35] 2026-05-14 08:32:00,018 | INFO     | [payload] validate_post thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:32:00,347 | INFO     | [job] validate thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:32:00,413 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:32:00,425 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:32:00,508 | INFO     | [payload] control thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:32:00,516 | INFO     | [data] copytool_in thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:32:00,966 | INFO     | [job] control thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:32:01,389 | INFO     | [data] copytool_out thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:32:01,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 10:32:35] 2026-05-14 08:32:05,648 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 10:32:35] 2026-05-14 08:32:29,123 | INFO     | PID=1084013 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 10:32:35] 2026-05-14 08:32:29,123 | INFO     | .. there are 10 such processes running
[2026-05-14 10:32:35] 2026-05-14 08:32:29,123 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 10:32:35] 2026-05-14 08:32:29,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 10:32:35] 2026-05-14 08:32:29,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 10:32:35] 2026-05-14 08:32:29,957 | INFO     | [monitor] cgroup control has ended
[2026-05-14 10:32:35] 2026-05-14 08:32:30,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22456835860288)>', '<ExcThread(monitor, started 22456602740480)>']
[2026-05-14 10:32:35] 2026-05-14 08:32:31,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 10:32:35] 2026-05-14 08:32:31,134 | INFO     | [monitor] control thread has ended
[2026-05-14 10:32:35] 2026-05-14 08:32:35,475 | INFO     | all workflow threads have been joined
[2026-05-14 10:32:35] 2026-05-14 08:32:35,475 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 10:32:35] 2026-05-14 08:32:35,475 | INFO     | traces error code: 0
[2026-05-14 10:32:35] 2026-05-14 08:32:35,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 10:32:35] 2026-05-14 08:32:35,532 [wrapper] ==== pilot stdout END ====
[2026-05-14 10:32:35] 2026-05-14 08:32:35,535 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 10:32:35] 2026-05-14 08:32:35,537 [wrapper] pilotpid: 1084013
[2026-05-14 10:32:35] 2026-05-14 08:32:35,539 [wrapper] Pilot exit status: 0
[2026-05-14 10:32:35] 2026-05-14 08:32:35,545 [wrapper] pandaids: 7138269116
[2026-05-14 10:32:35] 2026-05-14 08:32:35,592 [wrapper] cleanup supervisor_pilot 1344313 1084014
[2026-05-14 10:32:35] 2026-05-14 08:32:35,594 [wrapper] Test setup, not cleaning
[2026-05-14 10:32:35] 2026-05-14 08:32:35,596 [wrapper] apfmon messages muted
[2026-05-14 10:32:35] 2026-05-14 08:32:35,597 [wrapper] ==== wrapper stdout END ====
[2026-05-14 10:32:35] 2026-05-14 08:32:35,598 [wrapper] ==== wrapper stderr END ====
[2026-05-14 10:32:35]  *** Error codes and diagnostics ***
[2026-05-14 10:32:35]     "exeErrorCode": 0,
[2026-05-14 10:32:35]     "pilotErrorCode": 0,
[2026-05-14 10:32:35]  *** Listing of results directory ***
[2026-05-14 10:32:35] total 614988
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc    683926 May 14 07:55 pilot3.tar.gz
[2026-05-14 10:32:35] -rwx------. 1 boinc boinc     36281 May 14 07:58 runpilot2-wrapper.sh
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc      5631 May 14 08:08 queuedata.json
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc       100 May 14 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 10:32:35] -rwxr-xr-x. 1 boinc boinc      7986 May 14 10:14 run_atlas
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc       105 May 14 10:14 job.xml
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc      6628 May 14 10:14 init_data.xml
[2026-05-14 10:32:35] -rw-r--r--. 2 boinc boinc 443516578 May 14 10:14 EVNT.46701437._000745.pool.root.1
[2026-05-14 10:32:35] -rw-r--r--. 2 boinc boinc     15667 May 14 10:14 start_atlas.sh
[2026-05-14 10:32:35] drwxrwx--x. 2 boinc boinc      4096 May 14 10:14 shared
[2026-05-14 10:32:35] -rw-r--r--. 2 boinc boinc    697418 May 14 10:14 input.tar.gz
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc         0 May 14 10:14 boinc_lockfile
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc      2563 May 14 10:14 pandaJob.out
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc    992937 May 14 10:14 agis_schedconf.cvmfs.json
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc   1502367 May 14 10:14 agis_ddmendpoints.agis.ALL.json
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc       443 May 14 10:14 workernode_map.json
[2026-05-14 10:32:35] drwx------. 5 boinc boinc      4096 May 14 10:14 pilot3
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc 181179281 May 14 10:31 HITS.50087078._004702.pool.root.1
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc       488 May 14 10:31 boinc_task_state.xml
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc        95 May 14 10:31 pilot_heartbeat.json
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc      1027 May 14 10:31 memory_monitor_summary.json
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc    314111 May 14 10:31 log.50087078._004702.job.log.tgz.1
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc      6370 May 14 10:31 heartbeat_new.json
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc      6261 May 14 10:31 heartbeat.json
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc        27 May 14 10:32 wrapper_checkpoint.txt
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc      8192 May 14 10:32 boinc_mmap_file
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc      4906 May 14 10:32 pilotlog.txt
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc    151216 May 14 10:32 log.50087078._004702.job.log.1
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc       357 May 14 10:32 output.list
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc       410 May 14 10:32 runtime_log
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc    481280 May 14 10:32 result.tar.gz
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc      8846 May 14 10:32 runtime_log.err
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc       656 May 14 10:32 64a10561e078.diag
[2026-05-14 10:32:35] -rw-r--r--. 1 boinc boinc     21019 May 14 10:32 stderr.txt
[2026-05-14 10:32:35] HITS file was successfully produced:
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc 181179281 May 14 10:31 shared/HITS.pool.root.1
[2026-05-14 10:32:35]  *** Contents of shared directory: ***
[2026-05-14 10:32:35] total 611240
[2026-05-14 10:32:35] -rw-r--r--. 2 boinc boinc 443516578 May 14 10:14 ATLAS.root_0
[2026-05-14 10:32:35] -rw-r--r--. 2 boinc boinc     15667 May 14 10:14 start_atlas.sh
[2026-05-14 10:32:35] -rw-r--r--. 2 boinc boinc    697418 May 14 10:14 input.tar.gz
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc 181179281 May 14 10:31 HITS.pool.root.1
[2026-05-14 10:32:35] -rw-------. 1 boinc boinc    481280 May 14 10:32 result.tar.gz
10:32:37 (1079478): run_atlas exited; CPU time 10968.644944
10:32:37 (1079478): called boinc_finish(0)

</stderr_txt>
]]>

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