Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
06:42:03 (124769): wrapper (7.7.26015): starting
06:42:03 (124769): wrapper: running run_atlas (--nthreads 4)
[2026-05-14 06:42:03] Arguments: --nthreads 4
[2026-05-14 06:42:03] Threads: 4
[2026-05-14 06:42:03] Checking for CVMFS
[2026-05-14 06:42:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 06:42:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 06:42:12] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 06:42:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 06:42:12] 2.12.7.0 124991 0 25304 159510 3 1 2405365 4194304 0 130560 0 0 0.000 1282 2105 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-05-14 06:42:12] CVMFS is ok
[2026-05-14 06:42:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 06:42:12] Checking for apptainer binary...
[2026-05-14 06:42:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 06:42:12] Running /usr/bin/apptainer --version
[2026-05-14 06:42:12] apptainer version 1.0.3
[2026-05-14 06:42:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 06:42:12] TeeC04
[2026-05-14 06:42:12] apptainer works
[2026-05-14 06:42:12] Set ATHENA_PROC_NUMBER=4
[2026-05-14 06:42:12] Set ATHENA_CORE_NUMBER=4
[2026-05-14 06:42:13] Starting ATLAS job with PandaID=7138587408
[2026-05-14 06:42:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 06:47:17]  *** The last 200 lines of the pilot log: ***
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | found no stored workdir sizes
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | wrong length of table data, x=[1778737413.0], y=[24697.0] (must be same and length>=4)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | could have reported an average CPU frequency of 2824 MHz (4 samples)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | ..............................
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . Timing measurements:
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . get job = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . initial setup = 8 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . payload setup = 6 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . stage-in = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . payload execution = 41 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . stage-out = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . log creation = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | ..............................
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/1/PanDA_Pilot-7138587408/pilotlog.txt
[2026-05-14 06:47:17] 2026-05-14 05:46:14,067 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 06:47:17] - Log from pilotlog.txt -
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | INFO     | extracted standard info from prmon json
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | found no stored workdir sizes
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | wrong length of table data, x=[1778737413.0], y=[24697.0] (must be same and length>=4)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | could have reported an average CPU frequency of 2824 MHz (4 samples)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | ..............................
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . Timing measurements:
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . get job = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . initial setup = 8 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . payload setup = 6 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . stage-in = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . payload execution = 41 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . stage-out = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . log creation = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | ..............................
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/1/PanDA_Pilot-7138587408/pilotlog.txt
[2026-05-14 06:47:17] 2026-05-14 05:46:14,067 | WARNING  | 
[2026-05-14 06:47:17] [begin log extracts]
[2026-05-14 06:47:17] - Log from pilotlog.txt -
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | INFO     | extracted standard info from prmon json
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | found no stored workdir sizes
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 06:47:17] 2026-05-14 05:46:14,056 | WARNING  | wrong length of table data, x=[1778737413.0], y=[24697.0] (must be same and length>=4)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | could have reported an average CPU frequency of 2824 MHz (4 samples)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | ..............................
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . Timing measurements:
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . get job = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . initial setup = 8 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . payload setup = 6 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . stage-in = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . payload execution = 41 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . stage-out = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | . log creation = 0 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | ..............................
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 06:47:17] 2026-05-14 05:46:14,057 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/1/PanDA_Pilot-7138587408/pilotlog.txt
[2026-05-14 06:47:17] [end log extracts]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,067 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,068 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 06:47:17] 2026-05-14 05:46:14,366 | INFO     | 
[2026-05-14 06:47:17] 2026-05-14 05:46:14,366 | INFO     | job summary report
[2026-05-14 06:47:17] 2026-05-14 05:46:14,366 | INFO     | --------------------------------------------------
[2026-05-14 06:47:17] 2026-05-14 05:46:14,366 | INFO     | PanDA job id: 7138587408
[2026-05-14 06:47:17] 2026-05-14 05:46:14,366 | INFO     | task id: 50250192
[2026-05-14 06:47:17] 2026-05-14 05:46:14,366 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 06:44:06,534 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | pilot state: failed 
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | transexitcode: 65
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | exeerrorcode: 65
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | exitcode: 65
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | cpuconsumptiontime: 18 s
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | nevents: 0
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | neventsw: 0
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | pid: 133453
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | pgrp: 133453
[2026-05-14 06:47:17] 2026-05-14 05:46:14,367 | INFO     | corecount: 4
[2026-05-14 06:47:17] 2026-05-14 05:46:14,368 | INFO     | event service: False
[2026-05-14 06:47:17] 2026-05-14 05:46:14,368 | INFO     | sizes: {0: 2265876, 1: 2267478, 11: 2267478, 51: 2290690, 52: 2290666, 53: 2294988, 54: 2295144, 172: 2295310}
[2026-05-14 06:47:17] 2026-05-14 05:46:14,368 | INFO     | --------------------------------------------------
[2026-05-14 06:47:17] 2026-05-14 05:46:14,368 | INFO     | 
[2026-05-14 06:47:17] 2026-05-14 05:46:14,368 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2026-05-14 06:47:17] 2026-05-14 05:46:14,382 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,382 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,384 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,384 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 06:47:17] 2026-05-14 05:46:14,384 | INFO     | job 7138587408 has completed (purged errors)
[2026-05-14 06:47:17] 2026-05-14 05:46:14,384 | INFO     | overall cleanup function is called
[2026-05-14 06:47:17] 2026-05-14 05:46:15,386 | INFO     | --- collectZombieJob: --- 10, [133453]
[2026-05-14 06:47:17] 2026-05-14 05:46:15,386 | INFO     | zombie collector waiting for pid 133453
[2026-05-14 06:47:17] 2026-05-14 05:46:15,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 06:47:17] 2026-05-14 05:46:15,387 | INFO     | collected zombie processes
[2026-05-14 06:47:17] 2026-05-14 05:46:15,387 | INFO     | will attempt to kill all subprocesses of pid=133453
[2026-05-14 06:47:17] 2026-05-14 05:46:15,445 | INFO     | process IDs to be killed: [133453] (in reverse order)
[2026-05-14 06:47:17] 2026-05-14 05:46:15,475 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 06:47:17] 2026-05-14 05:46:15,475 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 06:47:17] 2026-05-14 05:46:15,477 | INFO     | did not find any defunct processes belonging to 133453
[2026-05-14 06:47:17] 2026-05-14 05:46:15,479 | INFO     | did not find any defunct processes belonging to 133453
[2026-05-14 06:47:17] 2026-05-14 05:46:15,479 | INFO     | Ready for new job
[2026-05-14 06:47:17] 2026-05-14 05:46:15,480 | INFO     | ***************************************
[2026-05-14 06:47:17] 2026-05-14 05:46:15,480 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 06:47:17] 2026-05-14 05:46:15,480 | INFO     | ***************************************
[2026-05-14 06:47:17] 2026-05-14 05:46:15,480 | INFO     | 
[2026-05-14 06:47:17] 2026-05-14 05:46:15,499 | INFO     | architecture information:
[2026-05-14 06:47:17] 2026-05-14 05:46:15,499 | INFO     | executing command: cat /etc/os-release
[2026-05-14 06:47:17] 2026-05-14 05:46:15,509 | INFO     | cat /etc/os-release:
[2026-05-14 06:47:17] NAME="CentOS Linux"
[2026-05-14 06:47:17] VERSION="7 (Core)"
[2026-05-14 06:47:17] ID="centos"
[2026-05-14 06:47:17] ID_LIKE="rhel fedora"
[2026-05-14 06:47:17] VERSION_ID="7"
[2026-05-14 06:47:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 06:47:17] ANSI_COLOR="0;31"
[2026-05-14 06:47:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 06:47:17] HOME_URL="https://www.centos.org/"
[2026-05-14 06:47:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 06:47:17] 
[2026-05-14 06:47:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 06:47:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 06:47:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 06:47:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 06:47:17] 
[2026-05-14 06:47:17] 2026-05-14 05:46:15,509 | INFO     | ***************************************
[2026-05-14 06:47:17] 2026-05-14 05:46:16,010 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2026-05-14 06:47:17] 2026-05-14 05:46:16,020 | INFO     | sufficient remaining disk space (432804986880 B)
[2026-05-14 06:47:17] 2026-05-14 05:46:16,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 06:47:17] 2026-05-14 05:46:16,021 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 06:47:17] 2026-05-14 05:46:16,021 | INFO     | update_server=False
[2026-05-14 06:47:17] 2026-05-14 05:46:16,021 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 06:47:17] 2026-05-14 05:46:16,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 06:47:17] 2026-05-14 05:46:16,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 06:47:17] 2026-05-14 05:46:16,029 | INFO     | all data control threads have been joined
[2026-05-14 06:47:17] 2026-05-14 05:46:16,509 | INFO     | all job control threads have been joined
[2026-05-14 06:47:17] 2026-05-14 05:46:16,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 06:47:17] 2026-05-14 05:46:16,780 | INFO     | aborting loop
[2026-05-14 06:47:17] 2026-05-14 05:46:17,026 | INFO     | [job] retrieve thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,027 | INFO     | [job] queue monitor thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,034 | INFO     | [data] control thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,110 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,118 | INFO     | all payload control threads have been joined
[2026-05-14 06:47:17] 2026-05-14 05:46:17,314 | INFO     | [payload] validate_post thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,334 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,514 | INFO     | [job] control thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,518 | INFO     | [data] copytool_in thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,662 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,782 | INFO     | [job] job monitor thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,950 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:17,958 | INFO     | [payload] failed_post thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:18,026 | INFO     | [data] copytool_out thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:18,122 | INFO     | [payload] control thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:18,446 | INFO     | [job] validate thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:19,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 06:47:17] 2026-05-14 05:46:23,124 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 06:47:17] 2026-05-14 05:46:45,582 | INFO     | PID=129073 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-14 06:47:17] 2026-05-14 05:46:45,582 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 06:47:17] 2026-05-14 05:46:45,582 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 06:47:17] 2026-05-14 05:46:45,582 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 06:47:17] 2026-05-14 05:47:10,810 | INFO     | [monitor] cgroup control has ended
[2026-05-14 06:47:17] 2026-05-14 05:47:12,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961113610048)>', '<ExcThread(monitor, started 139960669681408)>']
[2026-05-14 06:47:17] 2026-05-14 05:47:12,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 06:47:17] 2026-05-14 05:47:12,694 | INFO     | [monitor] control thread has ended
[2026-05-14 06:47:17] 2026-05-14 05:47:17,700 | INFO     | all workflow threads have been joined
[2026-05-14 06:47:17] 2026-05-14 05:47:17,700 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 06:47:17] 2026-05-14 05:47:17,700 | INFO     | traces error code: 0
[2026-05-14 06:47:17] 2026-05-14 05:47:17,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 06:47:17] 2026-05-14 05:47:17,796 [wrapper] ==== pilot stdout END ====
[2026-05-14 06:47:17] 2026-05-14 05:47:17,798 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 06:47:17] 2026-05-14 05:47:17,800 [wrapper] pilotpid: 129073
[2026-05-14 06:47:17] 2026-05-14 05:47:17,802 [wrapper] Pilot exit status: 0
[2026-05-14 06:47:17] 2026-05-14 05:47:17,810 [wrapper] pandaids: 7138587408
[2026-05-14 06:47:17] 2026-05-14 05:47:17,829 [wrapper] cleanup supervisor_pilot  129079 129074
[2026-05-14 06:47:17] 2026-05-14 05:47:17,832 [wrapper] Test setup, not cleaning
[2026-05-14 06:47:17] 2026-05-14 05:47:17,834 [wrapper] apfmon messages muted
[2026-05-14 06:47:17] 2026-05-14 05:47:17,836 [wrapper] ==== wrapper stdout END ====
[2026-05-14 06:47:17] 2026-05-14 05:47:17,838 [wrapper] ==== wrapper stderr END ====
[2026-05-14 06:47:17]  *** Error codes and diagnostics ***
[2026-05-14 06:47:17]     "exeErrorCode": 65,
[2026-05-14 06:47:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 06:47:17]     "pilotErrorCode": 1305,
[2026-05-14 06:47:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 06:47:17]  *** Listing of results directory ***
[2026-05-14 06:47:17] total 103456
[2026-05-14 06:47:17] -rw-r--r-- 1 m m    683926 May 13 22:11 pilot3.tar.gz
[2026-05-14 06:47:17] -rw-r--r-- 1 m m      5631 May 13 22:13 queuedata.json
[2026-05-14 06:47:17] -rwx------ 1 m m     36281 May 13 22:15 runpilot2-wrapper.sh
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m       100 May 14 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 06:47:17] -rwxr-xr-x 1 m m      7986 May 14 06:42 run_atlas
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m       105 May 14 06:42 job.xml
[2026-05-14 06:47:17] -rw-r--r-- 2 m m 101632636 May 14 06:42 EVNT.50238157._000152.pool.root.1
[2026-05-14 06:47:17] -rw-r--r-- 2 m m     15667 May 14 06:42 start_atlas.sh
[2026-05-14 06:47:17] drwxrwx--x 2 m m      4096 May 14 06:42 shared
[2026-05-14 06:47:17] -rw-r--r-- 2 m m    697437 May 14 06:42 input.tar.gz
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m      5872 May 14 06:42 init_data.xml
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m         0 May 14 06:42 boinc_lockfile
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m      2560 May 14 06:42 pandaJob.out
[2026-05-14 06:47:17] -rw------- 1 m m    993699 May 14 06:43 agis_schedconf.cvmfs.json
[2026-05-14 06:47:17] -rw------- 1 m m   1502367 May 14 06:43 agis_ddmendpoints.agis.ALL.json
[2026-05-14 06:47:17] -rw------- 1 m m       416 May 14 06:43 workernode_map.json
[2026-05-14 06:47:17] drwx------ 5 m m      4096 May 14 06:43 pilot3
[2026-05-14 06:47:17] -rw------- 1 m m       949 May 14 06:44 memory_monitor_summary.json
[2026-05-14 06:47:17] -rw------- 1 m m     21332 May 14 06:44 log.50250192._014432.job.log.tgz.1
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m       481 May 14 06:44 boinc_task_state.xml
[2026-05-14 06:47:17] -rw------- 1 m m        95 May 14 06:46 pilot_heartbeat.json
[2026-05-14 06:47:17] -rw------- 1 m m      6978 May 14 06:46 heartbeat_new.json
[2026-05-14 06:47:17] -rw------- 1 m m      6940 May 14 06:46 heartbeat.json
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m      8192 May 14 06:47 boinc_mmap_file
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m        22 May 14 06:47 wrapper_checkpoint.txt
[2026-05-14 06:47:17] -rw------- 1 m m      4746 May 14 06:47 pilotlog.txt
[2026-05-14 06:47:17] -rw------- 1 m m     74836 May 14 06:47 log.50250192._014432.job.log.1
[2026-05-14 06:47:17] -rw------- 1 m m       188 May 14 06:47 output.list
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m       410 May 14 06:47 runtime_log
[2026-05-14 06:47:17] -rw------- 1 m m    112640 May 14 06:47 result.tar.gz
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m      8198 May 14 06:47 runtime_log.err
[2026-05-14 06:47:17] -rw------- 1 m m       623 May 14 06:47 e9da3280f5bb.diag
[2026-05-14 06:47:17] -rw-rw-r-- 1 m m     21292 May 14 06:47 stderr.txt
[2026-05-14 06:47:17] No HITS result produced
[2026-05-14 06:47:17]  *** Contents of shared directory: ***
[2026-05-14 06:47:17] total 100064
[2026-05-14 06:47:17] -rw-r--r-- 2 m m 101632636 May 14 06:42 ATLAS.root_0
[2026-05-14 06:47:17] -rw-r--r-- 2 m m     15667 May 14 06:42 start_atlas.sh
[2026-05-14 06:47:17] -rw-r--r-- 2 m m    697437 May 14 06:42 input.tar.gz
[2026-05-14 06:47:17] -rw------- 1 m m    112640 May 14 06:47 result.tar.gz
06:47:19 (124769): run_atlas exited; CPU time 25.353284
06:47:19 (124769): called boinc_finish(0)

</stderr_txt>
]]>

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