Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:09:49 (4001170): wrapper (7.7.26015): starting
09:09:49 (4001170): wrapper: running run_atlas (--nthreads 12)
[2026-05-14 09:09:49] Arguments: --nthreads 12
[2026-05-14 09:09:49] Threads: 12
[2026-05-14 09:09:49] Checking for CVMFS
[2026-05-14 09:09:49] No cvmfs_config command found, will try listing directly
[2026-05-14 09:09:49] CVMFS is ok
[2026-05-14 09:09:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 09:09:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 09:09:49] Further information can be found at the LHC@home message board.
[2026-05-14 09:09:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 09:09:49] Checking for apptainer binary...
[2026-05-14 09:09:49] which: no apptainer in ((null))
[2026-05-14 09:09:49] apptainer is not installed, using version from CVMFS
[2026-05-14 09:09:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 09:09:49] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot192/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-05-14 09:09:49] apptainer works
[2026-05-14 09:09:49] Set ATHENA_PROC_NUMBER=12
[2026-05-14 09:09:49] Set ATHENA_CORE_NUMBER=12
[2026-05-14 09:09:49] Starting ATLAS job with PandaID=7138670515
[2026-05-14 09:09:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot192/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 09:13:01]  *** The last 200 lines of the pilot log: ***
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | found no stored workdir sizes
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | wrong length of table data, x=[1778742612.0], y=[6431.0] (must be same and length>=4)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | could have reported an average CPU frequency of 3701 MHz (4 samples)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | ..............................
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . Timing measurements:
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . get job = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . initial setup = 2 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . payload setup = 3 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . stage-in = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | . payload execution = 12 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | . stage-out = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | . log creation = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | ..............................
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7138670515/pilotlog.txt
[2026-05-14 09:13:01] 2026-05-14 07:12:22,271 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 09:13:01] - Log from pilotlog.txt -
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | extracted standard info from prmon json
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | found no stored workdir sizes
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | wrong length of table data, x=[1778742612.0], y=[6431.0] (must be same and length>=4)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | could have reported an average CPU frequency of 3701 MHz (4 samples)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | ..............................
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . Timing measurements:
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . get job = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . initial setup = 2 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . payload setup = 3 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . stage-in = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | . payload execution = 12 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | . stage-out = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | . log creation = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | ..............................
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7138670515/pilotlog.txt
[2026-05-14 09:13:01] 2026-05-14 07:12:22,271 | WARNING  | 
[2026-05-14 09:13:01] [begin log extracts]
[2026-05-14 09:13:01] - Log from pilotlog.txt -
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | extracted standard info from prmon json
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | found no stored workdir sizes
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | WARNING  | wrong length of table data, x=[1778742612.0], y=[6431.0] (must be same and length>=4)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | could have reported an average CPU frequency of 3701 MHz (4 samples)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | ..............................
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . Timing measurements:
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . get job = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . initial setup = 2 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . payload setup = 3 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,259 | INFO     | . stage-in = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | . payload execution = 12 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | . stage-out = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | . log creation = 0 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | ..............................
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 09:13:01] 2026-05-14 07:12:22,260 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7138670515/pilotlog.txt
[2026-05-14 09:13:01] [end log extracts]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,271 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,271 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | 
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | job summary report
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | --------------------------------------------------
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | PanDA job id: 7138670515
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | task id: 50250192
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 09:10:18,059 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | pilot state: failed 
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | transexitcode: 65
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | exeerrorcode: 65
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | exitcode: 65
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | cpuconsumptiontime: 9 s
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | nevents: 0
[2026-05-14 09:13:01] 2026-05-14 07:12:22,297 | INFO     | neventsw: 0
[2026-05-14 09:13:01] 2026-05-14 07:12:22,298 | INFO     | pid: 4035499
[2026-05-14 09:13:01] 2026-05-14 07:12:22,298 | INFO     | pgrp: 4035499
[2026-05-14 09:13:01] 2026-05-14 07:12:22,298 | INFO     | corecount: 12
[2026-05-14 09:13:01] 2026-05-14 07:12:22,298 | INFO     | event service: False
[2026-05-14 09:13:01] 2026-05-14 07:12:22,298 | INFO     | sizes: {0: 2267517, 10: 2267517, 19: 2295059, 136: 2295197}
[2026-05-14 09:13:01] 2026-05-14 07:12:22,298 | INFO     | --------------------------------------------------
[2026-05-14 09:13:01] 2026-05-14 07:12:22,298 | INFO     | 
[2026-05-14 09:13:01] 2026-05-14 07:12:22,298 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot192/slots/1
[2026-05-14 09:13:01] 2026-05-14 07:12:22,308 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,308 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,308 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,308 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | job 7138670515 has completed (purged errors)
[2026-05-14 09:13:01] 2026-05-14 07:12:22,309 | INFO     | overall cleanup function is called
[2026-05-14 09:13:01] 2026-05-14 07:12:23,314 | INFO     | --- collectZombieJob: --- 10, [4035499]
[2026-05-14 09:13:01] 2026-05-14 07:12:23,314 | INFO     | zombie collector waiting for pid 4035499
[2026-05-14 09:13:01] 2026-05-14 07:12:23,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 09:13:01] 2026-05-14 07:12:23,314 | INFO     | collected zombie processes
[2026-05-14 09:13:01] 2026-05-14 07:12:23,314 | INFO     | will attempt to kill all subprocesses of pid=4035499
[2026-05-14 09:13:01] 2026-05-14 07:12:23,431 | INFO     | process IDs to be killed: [4035499] (in reverse order)
[2026-05-14 09:13:01] 2026-05-14 07:12:23,503 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 09:13:01] 2026-05-14 07:12:23,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 09:13:01] 2026-05-14 07:12:23,514 | INFO     | did not find any defunct processes belonging to 4035499
[2026-05-14 09:13:01] 2026-05-14 07:12:23,523 | INFO     | did not find any defunct processes belonging to 4035499
[2026-05-14 09:13:01] 2026-05-14 07:12:23,523 | INFO     | Ready for new job
[2026-05-14 09:13:01] 2026-05-14 07:12:23,524 | INFO     | ***************************************
[2026-05-14 09:13:01] 2026-05-14 07:12:23,524 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 09:13:01] 2026-05-14 07:12:23,524 | INFO     | ***************************************
[2026-05-14 09:13:01] 2026-05-14 07:12:23,524 | INFO     | 
[2026-05-14 09:13:01] 2026-05-14 07:12:23,527 | INFO     | architecture information:
[2026-05-14 09:13:01] 2026-05-14 07:12:23,527 | INFO     | executing command: cat /etc/os-release
[2026-05-14 09:13:01] 2026-05-14 07:12:23,535 | INFO     | cat /etc/os-release:
[2026-05-14 09:13:01] NAME="CentOS Linux"
[2026-05-14 09:13:01] VERSION="7 (Core)"
[2026-05-14 09:13:01] ID="centos"
[2026-05-14 09:13:01] ID_LIKE="rhel fedora"
[2026-05-14 09:13:01] VERSION_ID="7"
[2026-05-14 09:13:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 09:13:01] ANSI_COLOR="0;31"
[2026-05-14 09:13:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 09:13:01] HOME_URL="https://www.centos.org/"
[2026-05-14 09:13:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 09:13:01] 
[2026-05-14 09:13:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 09:13:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 09:13:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 09:13:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 09:13:01] 
[2026-05-14 09:13:01] 2026-05-14 07:12:23,535 | INFO     | ***************************************
[2026-05-14 09:13:01] 2026-05-14 07:12:24,037 | INFO     | executing command: df -mP /var/lib/boinc/var/slot192/slots/1
[2026-05-14 09:13:01] 2026-05-14 07:12:24,046 | INFO     | sufficient remaining disk space (78022443008 B)
[2026-05-14 09:13:01] 2026-05-14 07:12:24,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 09:13:01] 2026-05-14 07:12:24,046 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 09:13:01] 2026-05-14 07:12:24,046 | INFO     | update_server=False
[2026-05-14 09:13:01] 2026-05-14 07:12:24,047 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 09:13:01] 2026-05-14 07:12:24,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 09:13:01] 2026-05-14 07:12:24,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 09:13:01] 2026-05-14 07:12:24,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 09:13:01] 2026-05-14 07:12:24,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 09:13:01] 2026-05-14 07:12:24,048 | INFO     | aborting loop
[2026-05-14 09:13:01] 2026-05-14 07:12:24,501 | INFO     | all payload control threads have been joined
[2026-05-14 09:13:01] 2026-05-14 07:12:24,540 | INFO     | all data control threads have been joined
[2026-05-14 09:13:01] 2026-05-14 07:12:25,051 | INFO     | [job] retrieve thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:25,053 | INFO     | [job] queue monitor thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:25,053 | INFO     | [job] job monitor thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:25,480 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:25,506 | INFO     | [payload] control thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:25,518 | INFO     | [payload] validate_post thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:25,546 | INFO     | [data] control thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:25,647 | INFO     | all job control threads have been joined
[2026-05-14 09:13:01] 2026-05-14 07:12:25,770 | INFO     | [job] validate thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:25,844 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:25,889 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:25,975 | INFO     | [data] copytool_in thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:26,053 | INFO     | [data] copytool_out thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:26,367 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:26,419 | INFO     | [payload] failed_post thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:26,652 | INFO     | [job] control thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:28,053 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 09:13:01] 2026-05-14 07:12:55,046 | INFO     | PID=4005667 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 09:13:01] 2026-05-14 07:12:55,046 | INFO     | .. there are 12 such processes running
[2026-05-14 09:13:01] 2026-05-14 07:12:55,048 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 09:13:01] 2026-05-14 07:12:55,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 09:13:01] 2026-05-14 07:12:55,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 09:13:01] 2026-05-14 07:12:55,719 | INFO     | [monitor] cgroup control has ended
[2026-05-14 09:13:01] 2026-05-14 07:12:56,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23275925092160)>', '<ExcThread(monitor, started 23275625228032)>']
[2026-05-14 09:13:01] 2026-05-14 07:12:57,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 09:13:01] 2026-05-14 07:12:57,059 | INFO     | [monitor] control thread has ended
[2026-05-14 09:13:01] 2026-05-14 07:13:01,127 | INFO     | all workflow threads have been joined
[2026-05-14 09:13:01] 2026-05-14 07:13:01,127 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 09:13:01] 2026-05-14 07:13:01,127 | INFO     | traces error code: 0
[2026-05-14 09:13:01] 2026-05-14 07:13:01,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 09:13:01] 2026-05-14 07:13:01,197 [wrapper] ==== pilot stdout END ====
[2026-05-14 09:13:01] 2026-05-14 07:13:01,199 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 09:13:01] 2026-05-14 07:13:01,200 [wrapper] pilotpid: 4005667
[2026-05-14 09:13:01] 2026-05-14 07:13:01,202 [wrapper] Pilot exit status: 0
[2026-05-14 09:13:01] 2026-05-14 07:13:01,206 [wrapper] pandaids: 7138670515
[2026-05-14 09:13:01] 2026-05-14 07:13:01,250 [wrapper] cleanup supervisor_pilot 4005673 4005668
[2026-05-14 09:13:01] 2026-05-14 07:13:01,252 [wrapper] Test setup, not cleaning
[2026-05-14 09:13:01] 2026-05-14 07:13:01,253 [wrapper] apfmon messages muted
[2026-05-14 09:13:01] 2026-05-14 07:13:01,254 [wrapper] ==== wrapper stdout END ====
[2026-05-14 09:13:01] 2026-05-14 07:13:01,255 [wrapper] ==== wrapper stderr END ====
[2026-05-14 09:13:01]  *** Error codes and diagnostics ***
[2026-05-14 09:13:01]     "exeErrorCode": 65,
[2026-05-14 09:13:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 09:13:01]     "pilotErrorCode": 1305,
[2026-05-14 09:13:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 09:13:01]  *** Listing of results directory ***
[2026-05-14 09:13:01] total 106832
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc    683926 May 14 03:50 pilot3.tar.gz
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc      5631 May 14 03:53 queuedata.json
[2026-05-14 09:13:01] -rwx------. 1 boinc boinc     36281 May 14 03:53 runpilot2-wrapper.sh
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc       100 May 14 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 09:13:01] -rwxr-xr-x. 1 boinc boinc      7986 May 14 09:09 run_atlas
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc       105 May 14 09:09 job.xml
[2026-05-14 09:13:01] -rw-r--r--. 2 boinc boinc     15667 May 14 09:09 start_atlas.sh
[2026-05-14 09:13:01] drwxrwx--x. 2 boinc boinc      4096 May 14 09:09 shared
[2026-05-14 09:13:01] -rw-r--r--. 2 boinc boinc    697448 May 14 09:09 input.tar.gz
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc      6630 May 14 09:09 init_data.xml
[2026-05-14 09:13:01] -rw-r--r--. 2 boinc boinc 105089951 May 14 09:09 EVNT.50238157._000458.pool.root.1
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc         0 May 14 09:09 boinc_lockfile
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc      2562 May 14 09:09 pandaJob.out
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc    992945 May 14 09:09 agis_schedconf.cvmfs.json
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc   1502367 May 14 09:09 agis_ddmendpoints.agis.ALL.json
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc       445 May 14 09:09 workernode_map.json
[2026-05-14 09:13:01] drwx------. 5 boinc boinc      4096 May 14 09:09 pilot3
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc       940 May 14 09:10 memory_monitor_summary.json
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc     20859 May 14 09:10 log.50250192._020505.job.log.tgz.1
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc      7044 May 14 09:12 heartbeat_new.json
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc      7006 May 14 09:12 heartbeat.json
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc        95 May 14 09:12 pilot_heartbeat.json
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc       480 May 14 09:12 boinc_task_state.xml
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc        22 May 14 09:13 wrapper_checkpoint.txt
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc      8192 May 14 09:13 boinc_mmap_file
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc      4833 May 14 09:13 pilotlog.txt
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc     76050 May 14 09:13 log.50250192._020505.job.log.1
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc       188 May 14 09:13 output.list
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc       410 May 14 09:13 runtime_log
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc    112640 May 14 09:13 result.tar.gz
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc      8693 May 14 09:13 runtime_log.err
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc       647 May 14 09:13 2b2a9b306aa5.diag
[2026-05-14 09:13:01] -rw-r--r--. 1 boinc boinc     21408 May 14 09:13 stderr.txt
[2026-05-14 09:13:01] No HITS result produced
[2026-05-14 09:13:01]  *** Contents of shared directory: ***
[2026-05-14 09:13:01] total 103440
[2026-05-14 09:13:01] -rw-r--r--. 2 boinc boinc     15667 May 14 09:09 start_atlas.sh
[2026-05-14 09:13:01] -rw-r--r--. 2 boinc boinc    697448 May 14 09:09 input.tar.gz
[2026-05-14 09:13:01] -rw-r--r--. 2 boinc boinc 105089951 May 14 09:09 ATLAS.root_0
[2026-05-14 09:13:01] -rw-------. 1 boinc boinc    112640 May 14 09:13 result.tar.gz
09:13:02 (4001170): run_atlas exited; CPU time 9.279643
09:13:02 (4001170): called boinc_finish(0)

</stderr_txt>
]]>

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