Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:03:52 (478662): wrapper (7.7.26015): starting
07:03:52 (478662): wrapper: running run_atlas (--nthreads 3)
[2026-05-14 07:03:52] Arguments: --nthreads 3
[2026-05-14 07:03:52] Threads: 3
[2026-05-14 07:03:52] Checking for CVMFS
[2026-05-14 07:03:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 07:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 07:03:52] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 07:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 07:03:52] 2.9.2.0 350421 38 54344 159509 1 186 26382145 36864001 0 130560 0 484092 100.000 1356 2362 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-05-14 07:03:52] CVMFS is ok
[2026-05-14 07:03:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 07:03:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 07:03:52] Further information can be found at the LHC@home message board.
[2026-05-14 07:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 07:03:52] Checking for apptainer binary...
[2026-05-14 07:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 07:03:52] Running /usr/bin/apptainer --version
[2026-05-14 07:03:52] apptainer version 1.4.1-1.1
[2026-05-14 07:03:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 07:03:53] atlasA223
[2026-05-14 07:03:53] apptainer works
[2026-05-14 07:03:53] Set ATHENA_PROC_NUMBER=3
[2026-05-14 07:03:53] Set ATHENA_CORE_NUMBER=3
[2026-05-14 07:03:53] Starting ATLAS job with PandaID=7138668355
[2026-05-14 07:03:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 07:07:07]  *** The last 200 lines of the pilot log: ***
[2026-05-14 07:07:07] 2026-05-14 05:06:53,881 | INFO     | ***************************************
[2026-05-14 07:07:07] 2026-05-14 05:06:54,385 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-05-14 07:07:07] 2026-05-14 05:06:54,397 | INFO     | sufficient remaining disk space (380338438144 B)
[2026-05-14 07:07:07] 2026-05-14 05:06:54,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 07:07:07] 2026-05-14 05:06:54,397 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 07:07:07] 2026-05-14 05:06:54,397 | INFO     | update_server=False
[2026-05-14 07:07:07] 2026-05-14 05:06:54,397 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 07:07:07] 2026-05-14 05:06:54,397 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 07:07:07] 2026-05-14 05:06:54,398 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-14 07:07:07] 2026-05-14 05:06:54,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 07:07:07] 2026-05-14 05:06:54,398 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 07:07:07] 2026-05-14 05:06:54,398 | INFO     | aborting loop
[2026-05-14 07:07:07] 2026-05-14 05:06:54,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 07:07:07] 2026-05-14 05:06:54,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 07:07:07] 2026-05-14 05:06:54,529 | INFO     | all data control threads have been joined
[2026-05-14 07:07:07] 2026-05-14 05:06:55,333 | INFO     | all job control threads have been joined
[2026-05-14 07:07:07] 2026-05-14 05:06:55,403 | INFO     | [job] retrieve thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:55,403 | INFO     | [job] queue monitor thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:55,403 | INFO     | [job] job monitor thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:55,428 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:55,530 | INFO     | [data] control thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:55,531 | INFO     | [data] copytool_in thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:55,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 07:07:07] 2026-05-14 05:06:55,836 | INFO     | all payload control threads have been joined
[2026-05-14 07:07:07] 2026-05-14 05:06:56,028 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:56,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 07:07:07] 2026-05-14 05:06:56,102 | INFO     | [payload] failed_post thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:56,339 | INFO     | [job] control thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:56,545 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:56,668 | INFO     | [payload] validate_post thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:56,806 | INFO     | [job] validate thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:56,842 | INFO     | [payload] control thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:56,885 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:06:57,723 | INFO     | [data] copytool_out thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:07:00,040 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 07:07:07] 2026-05-14 05:07:01,141 | INFO     | [monitor] cgroup control has ended
[2026-05-14 07:07:07] 2026-05-14 05:07:02,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601157023552)>', '<ExcThread(monitor, started 140600804349696)>']
[2026-05-14 07:07:07] 2026-05-14 05:07:02,440 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 07:07:07] 2026-05-14 05:07:02,440 | INFO     | [monitor] control thread has ended
[2026-05-14 07:07:07] 2026-05-14 05:07:07,333 | INFO     | all workflow threads have been joined
[2026-05-14 07:07:07] 2026-05-14 05:07:07,334 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 07:07:07] 2026-05-14 05:07:07,334 | INFO     | traces error code: 0
[2026-05-14 07:07:07] 2026-05-14 05:07:07,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 07:07:07] 2026-05-14 05:07:07,384 [wrapper] ==== pilot stdout END ====
[2026-05-14 07:07:07] 2026-05-14 05:07:07,386 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 07:07:07] 2026-05-14 05:07:07,388 [wrapper] pilotpid: 482389
[2026-05-14 07:07:07] 2026-05-14 05:07:07,391 [wrapper] Pilot exit status: 0
[2026-05-14 07:07:07] 2026-05-14 05:07:07,398 [wrapper] pandaids: 7138668355
[2026-05-14 07:07:07] 2026-05-14 05:07:07,415 [wrapper] cleanup supervisor_pilot  482395 482390
[2026-05-14 07:07:07] 2026-05-14 05:07:07,417 [wrapper] Test setup, not cleaning
[2026-05-14 07:07:07] 2026-05-14 05:07:07,420 [wrapper] apfmon messages muted
[2026-05-14 07:07:07] 2026-05-14 05:07:07,422 [wrapper] ==== wrapper stdout END ====
[2026-05-14 07:07:07] 2026-05-14 05:07:07,424 [wrapper] ==== wrapper stderr END ====
[2026-05-14 07:07:07]  *** Error codes and diagnostics ***
[2026-05-14 07:07:07]     "exeErrorCode": 65,
[2026-05-14 07:07:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 07:07:07]     "pilotErrorCode": 1305,
[2026-05-14 07:07:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 07:07:07]  *** Listing of results directory ***
[2026-05-14 07:07:07] total 106664
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc      5631 May 14 01:00 queuedata.json
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc    683926 May 14 01:00 pilot3.tar.gz
[2026-05-14 07:07:07] -rwx------ 1 boinc boinc     36281 May 14 01:01 runpilot2-wrapper.sh
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc       100 May 14 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 07:07:07] -rwxr-xr-x 1 boinc boinc      7986 May 14 07:03 run_atlas
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc       105 May 14 07:03 job.xml
[2026-05-14 07:07:07] -rw-r--r-- 2 boinc boinc 104936459 May 14 07:03 EVNT.50238157._000376.pool.root.1
[2026-05-14 07:07:07] -rw-r--r-- 2 boinc boinc    697437 May 14 07:03 input.tar.gz
[2026-05-14 07:07:07] -rw-r--r-- 2 boinc boinc     15667 May 14 07:03 start_atlas.sh
[2026-05-14 07:07:07] drwxrwx--x 2 boinc boinc      4096 May 14 07:03 shared
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc         0 May 14 07:03 boinc_setup_complete
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc      6361 May 14 07:03 init_data.xml
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc         0 May 14 07:03 boinc_lockfile
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc      2559 May 14 07:03 pandaJob.out
[2026-05-14 07:07:07] -rw------- 1 boinc boinc    993365 May 14 07:03 agis_schedconf.cvmfs.json
[2026-05-14 07:07:07] -rw------- 1 boinc boinc   1502367 May 14 07:03 agis_ddmendpoints.agis.ALL.json
[2026-05-14 07:07:07] -rw------- 1 boinc boinc       418 May 14 07:04 workernode_map.json
[2026-05-14 07:07:07] drwx------ 5 boinc boinc      4096 May 14 07:04 pilot3
[2026-05-14 07:07:07] -rw------- 1 boinc boinc       946 May 14 07:04 memory_monitor_summary.json
[2026-05-14 07:07:07] -rw------- 1 boinc boinc     20452 May 14 07:04 log.50250192._019202.job.log.tgz.1
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc       480 May 14 07:05 boinc_task_state.xml
[2026-05-14 07:07:07] -rw------- 1 boinc boinc        95 May 14 07:05 pilot_heartbeat.json
[2026-05-14 07:07:07] -rw------- 1 boinc boinc      6998 May 14 07:06 heartbeat_new.json
[2026-05-14 07:07:07] -rw------- 1 boinc boinc      6960 May 14 07:06 heartbeat.json
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc      8192 May 14 07:07 boinc_mmap_file
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc        22 May 14 07:07 wrapper_checkpoint.txt
[2026-05-14 07:07:07] -rw------- 1 boinc boinc      4555 May 14 07:07 pilotlog.txt
[2026-05-14 07:07:07] -rw------- 1 boinc boinc     76197 May 14 07:07 log.50250192._019202.job.log.1
[2026-05-14 07:07:07] -rw------- 1 boinc boinc       188 May 14 07:07 output.list
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc       410 May 14 07:07 runtime_log
[2026-05-14 07:07:07] -rw------- 1 boinc boinc    112640 May 14 07:07 result.tar.gz
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc      8381 May 14 07:07 runtime_log.err
[2026-05-14 07:07:07] -rw------- 1 boinc boinc       650 May 14 07:07 02c449f807ba.diag
[2026-05-14 07:07:07] -rw-r--r-- 1 boinc boinc      8088 May 14 07:07 stderr.txt
[2026-05-14 07:07:07] No HITS result produced
[2026-05-14 07:07:07]  *** Contents of shared directory: ***
[2026-05-14 07:07:07] total 103296
[2026-05-14 07:07:07] -rw-r--r-- 2 boinc boinc 104936459 May 14 07:03 ATLAS.root_0
[2026-05-14 07:07:07] -rw-r--r-- 2 boinc boinc    697437 May 14 07:03 input.tar.gz
[2026-05-14 07:07:07] -rw-r--r-- 2 boinc boinc     15667 May 14 07:03 start_atlas.sh
[2026-05-14 07:07:07] -rw------- 1 boinc boinc    112640 May 14 07:07 result.tar.gz
07:07:08 (478662): run_atlas exited; CPU time 9.320882
07:07:08 (478662): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN