Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
22:12:15 (1611329): wrapper (7.7.26015): starting
22:12:15 (1611329): wrapper: running run_atlas (--nthreads 4)
[2026-05-13 22:12:15] Arguments: --nthreads 4
[2026-05-13 22:12:15] Threads: 4
[2026-05-13 22:12:15] Checking for CVMFS
[2026-05-13 22:12:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 22:12:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 22:12:15] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 22:12:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 22:12:15] 2.13.3.0 1578080 3 44744 159509 0 186 3071909 6144001 188 130560 0 118731 99.983 2922 863 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-05-13 22:12:15] CVMFS is ok
[2026-05-13 22:12:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 22:12:15] Small home clusters do not require a local http proxy but it is suggested if
[2026-05-13 22:12:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-05-13 22:12:15] Further information can be found at the LHC@home message board.
[2026-05-13 22:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 22:12:15] Checking for apptainer binary...
[2026-05-13 22:12:15] apptainer is not installed, using version from CVMFS
[2026-05-13 22:12:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 22:12:15] desktop-b650ef
[2026-05-13 22:12:15] apptainer works
[2026-05-13 22:12:15] Set ATHENA_PROC_NUMBER=4
[2026-05-13 22:12:15] Set ATHENA_CORE_NUMBER=4
[2026-05-13 22:12:15] Starting ATLAS job with PandaID=7138667001
[2026-05-13 22:12:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 22:15:31]  *** The last 200 lines of the pilot log: ***
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | found no stored workdir sizes
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | wrong length of table data, x=[1778735564.0], y=[5913.0] (must be same and length>=4)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | could have reported an average CPU frequency of 4338 MHz (4 samples)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | ..............................
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | . Timing measurements:
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | . get job = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | . initial setup = 5 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . payload setup = 4 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . stage-in = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . payload execution = 14 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . stage-out = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . log creation = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | ..............................
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/27/PanDA_Pilot-7138667001/pilotlog.txt
[2026-05-13 22:15:31] 2026-05-14 05:14:56,528 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 22:15:31] - Log from pilotlog.txt -
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | extracted standard info from prmon json
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | found no stored workdir sizes
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | wrong length of table data, x=[1778735564.0], y=[5913.0] (must be same and length>=4)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | could have reported an average CPU frequency of 4338 MHz (4 samples)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | ..............................
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | . Timing measurements:
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | . get job = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | . initial setup = 5 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . payload setup = 4 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . stage-in = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . payload execution = 14 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . stage-out = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . log creation = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | ..............................
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/27/PanDA_Pilot-7138667001/pilotlog.txt
[2026-05-13 22:15:31] 2026-05-14 05:14:56,529 | WARNING  | 
[2026-05-13 22:15:31] [begin log extracts]
[2026-05-13 22:15:31] - Log from pilotlog.txt -
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | extracted standard info from prmon json
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | found no stored workdir sizes
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | WARNING  | wrong length of table data, x=[1778735564.0], y=[5913.0] (must be same and length>=4)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | could have reported an average CPU frequency of 4338 MHz (4 samples)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | ..............................
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | . Timing measurements:
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | . get job = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,518 | INFO     | . initial setup = 5 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . payload setup = 4 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . stage-in = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . payload execution = 14 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . stage-out = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | . log creation = 0 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | ..............................
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 22:15:31] 2026-05-14 05:14:56,519 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/27/PanDA_Pilot-7138667001/pilotlog.txt
[2026-05-13 22:15:31] [end log extracts]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,529 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,529 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | 
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | job summary report
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | --------------------------------------------------
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | PanDA job id: 7138667001
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | task id: 50250192
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-13 22:12:52,088 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | pilot state: failed 
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | transexitcode: 65
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | exeerrorcode: 65
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | exitcode: 65
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | cpuconsumptiontime: 12 s
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | nevents: 0
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | neventsw: 0
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | pid: 1626831
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | pgrp: 1626831
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | corecount: 4
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | event service: False
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | sizes: {0: 2267458, 11: 2267458, 21: 2290729, 23: 2295060, 140: 2295198}
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | --------------------------------------------------
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | 
[2026-05-13 22:15:31] 2026-05-14 05:14:56,569 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/27
[2026-05-13 22:15:31] 2026-05-14 05:14:56,583 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,583 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,583 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,583 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | job 7138667001 has completed (purged errors)
[2026-05-13 22:15:31] 2026-05-14 05:14:56,584 | INFO     | overall cleanup function is called
[2026-05-13 22:15:31] 2026-05-14 05:14:57,590 | INFO     | --- collectZombieJob: --- 10, [1626831]
[2026-05-13 22:15:31] 2026-05-14 05:14:57,590 | INFO     | zombie collector waiting for pid 1626831
[2026-05-13 22:15:31] 2026-05-14 05:14:57,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 22:15:31] 2026-05-14 05:14:57,590 | INFO     | collected zombie processes
[2026-05-13 22:15:31] 2026-05-14 05:14:57,590 | INFO     | will attempt to kill all subprocesses of pid=1626831
[2026-05-13 22:15:31] 2026-05-14 05:14:57,651 | INFO     | process IDs to be killed: [1626831] (in reverse order)
[2026-05-13 22:15:31] 2026-05-14 05:14:57,686 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 22:15:31] 2026-05-14 05:14:57,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 22:15:31] 2026-05-14 05:14:57,689 | INFO     | did not find any defunct processes belonging to 1626831
[2026-05-13 22:15:31] 2026-05-14 05:14:57,692 | INFO     | did not find any defunct processes belonging to 1626831
[2026-05-13 22:15:31] 2026-05-14 05:14:57,692 | INFO     | Ready for new job
[2026-05-13 22:15:31] 2026-05-14 05:14:57,693 | INFO     | ***************************************
[2026-05-13 22:15:31] 2026-05-14 05:14:57,693 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 22:15:31] 2026-05-14 05:14:57,693 | INFO     | ***************************************
[2026-05-13 22:15:31] 2026-05-14 05:14:57,693 | INFO     | 
[2026-05-13 22:15:31] 2026-05-14 05:14:57,694 | INFO     | architecture information:
[2026-05-13 22:15:31] 2026-05-14 05:14:57,694 | INFO     | executing command: cat /etc/os-release
[2026-05-13 22:15:31] 2026-05-14 05:14:57,701 | INFO     | cat /etc/os-release:
[2026-05-13 22:15:31] NAME="CentOS Linux"
[2026-05-13 22:15:31] VERSION="7 (Core)"
[2026-05-13 22:15:31] ID="centos"
[2026-05-13 22:15:31] ID_LIKE="rhel fedora"
[2026-05-13 22:15:31] VERSION_ID="7"
[2026-05-13 22:15:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 22:15:31] ANSI_COLOR="0;31"
[2026-05-13 22:15:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 22:15:31] HOME_URL="https://www.centos.org/"
[2026-05-13 22:15:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 22:15:31] 
[2026-05-13 22:15:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 22:15:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 22:15:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 22:15:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 22:15:31] 
[2026-05-13 22:15:31] 2026-05-14 05:14:57,702 | INFO     | ***************************************
[2026-05-13 22:15:31] 2026-05-14 05:14:58,204 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/27
[2026-05-13 22:15:31] 2026-05-14 05:14:58,216 | INFO     | sufficient remaining disk space (399036645376 B)
[2026-05-13 22:15:31] 2026-05-14 05:14:58,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 22:15:31] 2026-05-14 05:14:58,216 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 22:15:31] 2026-05-14 05:14:58,216 | INFO     | update_server=False
[2026-05-13 22:15:31] 2026-05-14 05:14:58,216 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 22:15:31] 2026-05-14 05:14:58,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 22:15:31] 2026-05-14 05:14:58,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 22:15:31] 2026-05-14 05:14:58,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 22:15:31] 2026-05-14 05:14:58,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 22:15:31] 2026-05-14 05:14:58,434 | INFO     | aborting loop
[2026-05-13 22:15:31] 2026-05-14 05:14:58,816 | INFO     | all data control threads have been joined
[2026-05-13 22:15:31] 2026-05-14 05:14:58,926 | INFO     | all payload control threads have been joined
[2026-05-13 22:15:31] 2026-05-14 05:14:58,949 | INFO     | all job control threads have been joined
[2026-05-13 22:15:31] 2026-05-14 05:14:59,221 | INFO     | [job] retrieve thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:14:59,222 | INFO     | [job] queue monitor thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:14:59,439 | INFO     | [job] job monitor thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:14:59,659 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:14:59,743 | INFO     | [payload] failed_post thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:14:59,821 | INFO     | [data] control thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:14:59,931 | INFO     | [payload] control thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:14:59,954 | INFO     | [job] control thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:15:00,204 | INFO     | [job] validate thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:15:00,222 | INFO     | [data] copytool_out thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:15:00,263 | INFO     | [payload] validate_post thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:15:00,306 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:15:00,394 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:15:00,471 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:15:00,503 | INFO     | [data] copytool_in thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:15:02,221 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 22:15:31] 2026-05-14 05:15:25,655 | INFO     | [monitor] cgroup control has ended
[2026-05-13 22:15:31] 2026-05-14 05:15:26,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137829184845632)>', '<ExcThread(monitor, started 137828453316352)>']
[2026-05-13 22:15:31] 2026-05-14 05:15:28,439 | INFO     | PID=1615202 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-13 22:15:31] 2026-05-14 05:15:28,439 | INFO     | .. there are 3 such processes running
[2026-05-13 22:15:31] 2026-05-14 05:15:28,439 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 22:15:31] 2026-05-14 05:15:28,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 22:15:31] 2026-05-14 05:15:28,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 22:15:31] 2026-05-14 05:15:28,440 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 22:15:31] 2026-05-14 05:15:28,440 | INFO     | [monitor] control thread has ended
[2026-05-13 22:15:31] 2026-05-14 05:15:31,528 | INFO     | all workflow threads have been joined
[2026-05-13 22:15:31] 2026-05-14 05:15:31,528 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 22:15:31] 2026-05-14 05:15:31,528 | INFO     | traces error code: 0
[2026-05-13 22:15:31] 2026-05-14 05:15:31,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 22:15:31] 2026-05-14 05:15:31,597 [wrapper] ==== pilot stdout END ====
[2026-05-13 22:15:31] 2026-05-14 05:15:31,598 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 22:15:31] 2026-05-14 05:15:31,599 [wrapper] pilotpid: 1615202
[2026-05-13 22:15:31] 2026-05-14 05:15:31,601 [wrapper] Pilot exit status: 0
[2026-05-13 22:15:31] 2026-05-14 05:15:31,606 [wrapper] pandaids: 7138667001
[2026-05-13 22:15:31] 2026-05-14 05:15:31,631 [wrapper] cleanup supervisor_pilot 1615208 1615203
[2026-05-13 22:15:31] 2026-05-14 05:15:31,633 [wrapper] Test setup, not cleaning
[2026-05-13 22:15:31] 2026-05-14 05:15:31,634 [wrapper] apfmon messages muted
[2026-05-13 22:15:31] 2026-05-14 05:15:31,636 [wrapper] ==== wrapper stdout END ====
[2026-05-13 22:15:31] 2026-05-14 05:15:31,638 [wrapper] ==== wrapper stderr END ====
[2026-05-13 22:15:31]  *** Error codes and diagnostics ***
[2026-05-13 22:15:31]     "exeErrorCode": 65,
[2026-05-13 22:15:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 22:15:31]     "pilotErrorCode": 1305,
[2026-05-13 22:15:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 22:15:31]  *** Listing of results directory ***
[2026-05-13 22:15:31] total 104980
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc    683926 May 13 16:00 pilot3.tar.gz
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc      5631 May 13 16:03 queuedata.json
[2026-05-13 22:15:31] -rwx------ 1 boinc boinc     36281 May 13 16:03 runpilot2-wrapper.sh
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc       100 May 13 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 22:15:31] -rwxr-xr-x 1 boinc boinc      7986 May 13 22:12 run_atlas
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc       105 May 13 22:12 job.xml
[2026-05-13 22:15:31] -rw-r--r-- 2 boinc boinc 103189222 May 13 22:12 EVNT.50238157._000355.pool.root.1
[2026-05-13 22:15:31] -rw-r--r-- 2 boinc boinc    697442 May 13 22:12 input.tar.gz
[2026-05-13 22:15:31] drwxrwx--x 2 boinc boinc      4096 May 13 22:12 shared
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc         0 May 13 22:12 boinc_setup_complete
[2026-05-13 22:15:31] -rw-r--r-- 2 boinc boinc     15667 May 13 22:12 start_atlas.sh
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc     10114 May 13 22:12 init_data.xml
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc         0 May 13 22:12 boinc_lockfile
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc      2559 May 13 22:12 pandaJob.out
[2026-05-13 22:15:31] -rw------- 1 boinc boinc    993365 May 13 22:12 agis_schedconf.cvmfs.json
[2026-05-13 22:15:31] -rw------- 1 boinc boinc   1502367 May 13 22:12 agis_ddmendpoints.agis.ALL.json
[2026-05-13 22:15:31] -rw------- 1 boinc boinc       424 May 13 22:12 workernode_map.json
[2026-05-13 22:15:31] drwx------ 5 boinc boinc      4096 May 13 22:12 pilot3
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc       480 May 13 22:12 boinc_task_state.xml
[2026-05-13 22:15:31] -rw------- 1 boinc boinc       945 May 13 22:12 memory_monitor_summary.json
[2026-05-13 22:15:31] -rw------- 1 boinc boinc     20215 May 13 22:12 log.50250192._018822.job.log.tgz.1
[2026-05-13 22:15:31] -rw------- 1 boinc boinc      6991 May 13 22:14 heartbeat_new.json
[2026-05-13 22:15:31] -rw------- 1 boinc boinc      6953 May 13 22:14 heartbeat.json
[2026-05-13 22:15:31] -rw------- 1 boinc boinc        95 May 13 22:15 pilot_heartbeat.json
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc        22 May 13 22:15 wrapper_checkpoint.txt
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc      8192 May 13 22:15 boinc_mmap_file
[2026-05-13 22:15:31] -rw------- 1 boinc boinc      4831 May 13 22:15 pilotlog.txt
[2026-05-13 22:15:31] -rw------- 1 boinc boinc     74071 May 13 22:15 log.50250192._018822.job.log.1
[2026-05-13 22:15:31] -rw------- 1 boinc boinc       188 May 13 22:15 output.list
[2026-05-13 22:15:31] -rw------- 1 boinc boinc    112640 May 13 22:15 result.tar.gz
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc       410 May 13 22:15 runtime_log
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc      8433 May 13 22:15 runtime_log.err
[2026-05-13 22:15:31] -rw------- 1 boinc boinc       644 May 13 22:15 034a8fe814f9.diag
[2026-05-13 22:15:31] -rw-r--r-- 1 boinc boinc     21724 May 13 22:15 stderr.txt
[2026-05-13 22:15:31] No HITS result produced
[2026-05-13 22:15:31]  *** Contents of shared directory: ***
[2026-05-13 22:15:31] total 101588
[2026-05-13 22:15:31] -rw-r--r-- 2 boinc boinc 103189222 May 13 22:12 ATLAS.root_0
[2026-05-13 22:15:31] -rw-r--r-- 2 boinc boinc    697442 May 13 22:12 input.tar.gz
[2026-05-13 22:15:31] -rw-r--r-- 2 boinc boinc     15667 May 13 22:12 start_atlas.sh
[2026-05-13 22:15:31] -rw------- 1 boinc boinc    112640 May 13 22:15 result.tar.gz
22:15:32 (1611329): run_atlas exited; CPU time 12.594709
22:15:32 (1611329): called boinc_finish(0)

</stderr_txt>
]]>

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