Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
05:21:30 (123037): wrapper (7.7.26015): starting
05:21:30 (123037): wrapper: running run_atlas (--nthreads 4)
[2026-05-14 05:21:30] Arguments: --nthreads 4
[2026-05-14 05:21:30] Threads: 4
[2026-05-14 05:21:30] Checking for CVMFS
[2026-05-14 05:21:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 05:21:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 05:21:31] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 05:21:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 05:21:31] 2.12.7.0 110042 9 41324 159509 2 9 3335009 4194304 0 130560 0 48443 99.998 1285 2799 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-05-14 05:21:31] CVMFS is ok
[2026-05-14 05:21:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 05:21:31] Checking for apptainer binary...
[2026-05-14 05:21:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 05:21:31] Running /usr/bin/apptainer --version
[2026-05-14 05:21:31] apptainer version 1.0.3
[2026-05-14 05:21:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 05:21:32] TeeC38
[2026-05-14 05:21:32] apptainer works
[2026-05-14 05:21:32] Set ATHENA_PROC_NUMBER=4
[2026-05-14 05:21:32] Set ATHENA_CORE_NUMBER=4
[2026-05-14 05:21:32] Starting ATLAS job with PandaID=7138113801
[2026-05-14 05:21:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 05:25:52]  *** The last 200 lines of the pilot log: ***
[2026-05-14 05:25:52] 2026-05-14 04:24:53,150 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 05:25:52] 2026-05-14 04:24:53,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | WARNING  | found no stored workdir sizes
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | WARNING  | wrong length of table data, x=[1778732526.0], y=[5864.0] (must be same and length>=4)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | could have reported an average CPU frequency of 3200 MHz (4 samples)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | ..............................
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . Timing measurements:
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . get job = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . initial setup = 7 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . payload setup = 5 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . stage-in = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | . payload execution = 46 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | . stage-out = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | . log creation = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | ..............................
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138113801/pilotlog.txt
[2026-05-14 05:25:52] 2026-05-14 04:24:53,172 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 05:25:52] - Log from pilotlog.txt -
[2026-05-14 05:25:52] 2026-05-14 04:24:53,150 | INFO     | extracted standard info from prmon json
[2026-05-14 05:25:52] 2026-05-14 04:24:53,150 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 05:25:52] 2026-05-14 04:24:53,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | WARNING  | found no stored workdir sizes
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | WARNING  | wrong length of table data, x=[1778732526.0], y=[5864.0] (must be same and length>=4)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | could have reported an average CPU frequency of 3200 MHz (4 samples)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | ..............................
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . Timing measurements:
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . get job = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . initial setup = 7 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . payload setup = 5 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . stage-in = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | . payload execution = 46 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | . stage-out = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | . log creation = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | ..............................
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138113801/pilotlog.txt
[2026-05-14 05:25:52] 2026-05-14 04:24:53,173 | WARNING  | 
[2026-05-14 05:25:52] [begin log extracts]
[2026-05-14 05:25:52] - Log from pilotlog.txt -
[2026-05-14 05:25:52] 2026-05-14 04:24:53,150 | INFO     | extracted standard info from prmon json
[2026-05-14 05:25:52] 2026-05-14 04:24:53,150 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 05:25:52] 2026-05-14 04:24:53,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | WARNING  | found no stored workdir sizes
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 05:25:52] 2026-05-14 04:24:53,151 | WARNING  | wrong length of table data, x=[1778732526.0], y=[5864.0] (must be same and length>=4)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | could have reported an average CPU frequency of 3200 MHz (4 samples)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | ..............................
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . Timing measurements:
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . get job = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . initial setup = 7 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . payload setup = 5 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,152 | INFO     | . stage-in = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | . payload execution = 46 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | . stage-out = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | . log creation = 0 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | ..............................
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 05:25:52] 2026-05-14 04:24:53,153 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138113801/pilotlog.txt
[2026-05-14 05:25:52] [end log extracts]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,173 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,174 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 05:25:52] 2026-05-14 04:24:53,236 | INFO     | 
[2026-05-14 05:25:52] 2026-05-14 04:24:53,236 | INFO     | job summary report
[2026-05-14 05:25:52] 2026-05-14 04:24:53,236 | INFO     | --------------------------------------------------
[2026-05-14 05:25:52] 2026-05-14 04:24:53,236 | INFO     | PanDA job id: 7138113801
[2026-05-14 05:25:52] 2026-05-14 04:24:53,236 | INFO     | task id: 50250192
[2026-05-14 05:25:52] 2026-05-14 04:24:53,236 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 05:22:45,535 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 05:25:52] 2026-05-14 04:24:53,236 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | pilot state: failed 
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | transexitcode: 65
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | exeerrorcode: 65
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | exitcode: 65
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | cpuconsumptiontime: 15 s
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | nevents: 0
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | neventsw: 0
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | pid: 131546
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | pgrp: 131546
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | corecount: 4
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | event service: False
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | sizes: {0: 2265926, 1: 2267500, 11: 2267528, 55: 2295182, 59: 2295182, 176: 2295348}
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | --------------------------------------------------
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | 
[2026-05-14 05:25:52] 2026-05-14 04:24:53,237 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2026-05-14 05:25:52] 2026-05-14 04:24:53,249 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,249 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,249 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,249 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,250 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,250 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,250 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,250 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,250 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,251 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,251 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 05:25:52] 2026-05-14 04:24:53,251 | INFO     | job 7138113801 has completed (purged errors)
[2026-05-14 05:25:52] 2026-05-14 04:24:53,251 | INFO     | overall cleanup function is called
[2026-05-14 05:25:52] 2026-05-14 04:24:54,257 | INFO     | --- collectZombieJob: --- 10, [131546]
[2026-05-14 05:25:52] 2026-05-14 04:24:54,258 | INFO     | zombie collector waiting for pid 131546
[2026-05-14 05:25:52] 2026-05-14 04:24:54,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 05:25:52] 2026-05-14 04:24:54,258 | INFO     | collected zombie processes
[2026-05-14 05:25:52] 2026-05-14 04:24:54,259 | INFO     | will attempt to kill all subprocesses of pid=131546
[2026-05-14 05:25:52] 2026-05-14 04:24:54,311 | INFO     | process IDs to be killed: [131546] (in reverse order)
[2026-05-14 05:25:52] 2026-05-14 04:24:54,340 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 05:25:52] 2026-05-14 04:24:54,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 05:25:52] 2026-05-14 04:24:54,341 | INFO     | did not find any defunct processes belonging to 131546
[2026-05-14 05:25:52] 2026-05-14 04:24:54,343 | INFO     | did not find any defunct processes belonging to 131546
[2026-05-14 05:25:52] 2026-05-14 04:24:54,343 | INFO     | Ready for new job
[2026-05-14 05:25:52] 2026-05-14 04:24:54,344 | INFO     | ***************************************
[2026-05-14 05:25:52] 2026-05-14 04:24:54,344 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 05:25:52] 2026-05-14 04:24:54,344 | INFO     | ***************************************
[2026-05-14 05:25:52] 2026-05-14 04:24:54,344 | INFO     | 
[2026-05-14 05:25:52] 2026-05-14 04:24:54,364 | INFO     | architecture information:
[2026-05-14 05:25:52] 2026-05-14 04:24:54,365 | INFO     | executing command: cat /etc/os-release
[2026-05-14 05:25:52] 2026-05-14 04:24:54,374 | INFO     | cat /etc/os-release:
[2026-05-14 05:25:52] NAME="CentOS Linux"
[2026-05-14 05:25:52] VERSION="7 (Core)"
[2026-05-14 05:25:52] ID="centos"
[2026-05-14 05:25:52] ID_LIKE="rhel fedora"
[2026-05-14 05:25:52] VERSION_ID="7"
[2026-05-14 05:25:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 05:25:52] ANSI_COLOR="0;31"
[2026-05-14 05:25:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 05:25:52] HOME_URL="https://www.centos.org/"
[2026-05-14 05:25:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 05:25:52] 
[2026-05-14 05:25:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 05:25:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 05:25:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 05:25:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 05:25:52] 
[2026-05-14 05:25:52] 2026-05-14 04:24:54,374 | INFO     | ***************************************
[2026-05-14 05:25:52] 2026-05-14 04:24:54,878 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2026-05-14 05:25:52] 2026-05-14 04:24:54,891 | INFO     | sufficient remaining disk space (429923500032 B)
[2026-05-14 05:25:52] 2026-05-14 04:24:54,892 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 05:25:52] 2026-05-14 04:24:54,892 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 05:25:52] 2026-05-14 04:24:54,892 | INFO     | update_server=False
[2026-05-14 05:25:52] 2026-05-14 04:24:54,892 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 05:25:52] 2026-05-14 04:24:54,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 05:25:52] 2026-05-14 04:24:54,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 05:25:52] 2026-05-14 04:24:55,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 05:25:52] 2026-05-14 04:24:55,016 | INFO     | aborting loop
[2026-05-14 05:25:52] 2026-05-14 04:24:55,216 | INFO     | all data control threads have been joined
[2026-05-14 05:25:52] 2026-05-14 04:24:55,825 | INFO     | all job control threads have been joined
[2026-05-14 05:25:52] 2026-05-14 04:24:55,898 | INFO     | [job] retrieve thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:55,898 | INFO     | [job] queue monitor thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:55,961 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:55,975 | INFO     | [data] copytool_in thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:56,022 | INFO     | [job] job monitor thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:56,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 05:25:52] 2026-05-14 04:24:56,136 | INFO     | all payload control threads have been joined
[2026-05-14 05:25:52] 2026-05-14 04:24:56,222 | INFO     | [data] control thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:56,338 | INFO     | [payload] validate_post thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:56,513 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:56,831 | INFO     | [job] control thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:56,903 | INFO     | [payload] failed_post thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:57,142 | INFO     | [payload] control thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:57,164 | INFO     | [job] validate thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:57,262 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:57,345 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:58,096 | INFO     | [data] copytool_out thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:24:58,900 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 05:25:52] 2026-05-14 04:25:25,202 | INFO     | PID=127164 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-14 05:25:52] 2026-05-14 04:25:25,202 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 05:25:52] 2026-05-14 04:25:25,202 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 05:25:52] 2026-05-14 04:25:25,202 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 05:25:52] 2026-05-14 04:25:46,416 | INFO     | [monitor] cgroup control has ended
[2026-05-14 05:25:52] 2026-05-14 04:25:46,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516094601024)>', '<ExcThread(monitor, started 140515659986688)>']
[2026-05-14 05:25:52] 2026-05-14 04:25:47,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 05:25:52] 2026-05-14 04:25:47,310 | INFO     | [monitor] control thread has ended
[2026-05-14 05:25:52] 2026-05-14 04:25:51,987 | INFO     | all workflow threads have been joined
[2026-05-14 05:25:52] 2026-05-14 04:25:51,988 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 05:25:52] 2026-05-14 04:25:51,988 | INFO     | traces error code: 0
[2026-05-14 05:25:52] 2026-05-14 04:25:51,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 05:25:52] 2026-05-14 04:25:52,066 [wrapper] ==== pilot stdout END ====
[2026-05-14 05:25:52] 2026-05-14 04:25:52,069 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 05:25:52] 2026-05-14 04:25:52,070 [wrapper] pilotpid: 127164
[2026-05-14 05:25:52] 2026-05-14 04:25:52,073 [wrapper] Pilot exit status: 0
[2026-05-14 05:25:52] 2026-05-14 04:25:52,079 [wrapper] pandaids: 7138113801
[2026-05-14 05:25:52] 2026-05-14 04:25:52,094 [wrapper] cleanup supervisor_pilot  127170 127165
[2026-05-14 05:25:52] 2026-05-14 04:25:52,097 [wrapper] Test setup, not cleaning
[2026-05-14 05:25:52] 2026-05-14 04:25:52,099 [wrapper] apfmon messages muted
[2026-05-14 05:25:52] 2026-05-14 04:25:52,101 [wrapper] ==== wrapper stdout END ====
[2026-05-14 05:25:52] 2026-05-14 04:25:52,102 [wrapper] ==== wrapper stderr END ====
[2026-05-14 05:25:52]  *** Error codes and diagnostics ***
[2026-05-14 05:25:52]     "exeErrorCode": 65,
[2026-05-14 05:25:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 05:25:52]     "pilotErrorCode": 1305,
[2026-05-14 05:25:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 05:25:52]  *** Listing of results directory ***
[2026-05-14 05:25:52] total 106132
[2026-05-14 05:25:52] -rw-r--r-- 1 m m    683926 May 13 14:23 pilot3.tar.gz
[2026-05-14 05:25:52] -rwx------ 1 m m     36281 May 13 14:26 runpilot2-wrapper.sh
[2026-05-14 05:25:52] -rw-r--r-- 1 m m      5631 May 13 14:27 queuedata.json
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m       100 May 14 05:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 05:25:52] -rwxr-xr-x 1 m m      7986 May 14 05:21 run_atlas
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m       105 May 14 05:21 job.xml
[2026-05-14 05:25:52] -rw-r--r-- 2 m m     15667 May 14 05:21 start_atlas.sh
[2026-05-14 05:25:52] drwxrwx--x 2 m m      4096 May 14 05:21 shared
[2026-05-14 05:25:52] -rw-r--r-- 2 m m    697435 May 14 05:21 input.tar.gz
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m      5872 May 14 05:21 init_data.xml
[2026-05-14 05:25:52] -rw-r--r-- 2 m m 104371718 May 14 05:21 EVNT.50238157._000350.pool.root.1
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m         0 May 14 05:21 boinc_lockfile
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m      2560 May 14 05:21 pandaJob.out
[2026-05-14 05:25:52] -rw------- 1 m m    993365 May 14 05:21 agis_schedconf.cvmfs.json
[2026-05-14 05:25:52] -rw------- 1 m m   1502367 May 14 05:21 agis_ddmendpoints.agis.ALL.json
[2026-05-14 05:25:52] -rw------- 1 m m       412 May 14 05:21 workernode_map.json
[2026-05-14 05:25:52] drwx------ 5 m m      4096 May 14 05:21 pilot3
[2026-05-14 05:25:52] -rw------- 1 m m       941 May 14 05:22 memory_monitor_summary.json
[2026-05-14 05:25:52] -rw------- 1 m m     21563 May 14 05:22 log.50250192._008771.job.log.tgz.1
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m       480 May 14 05:23 boinc_task_state.xml
[2026-05-14 05:25:52] -rw------- 1 m m        95 May 14 05:24 pilot_heartbeat.json
[2026-05-14 05:25:52] -rw------- 1 m m      7008 May 14 05:24 heartbeat_new.json
[2026-05-14 05:25:52] -rw------- 1 m m      6970 May 14 05:24 heartbeat.json
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m      8192 May 14 05:25 boinc_mmap_file
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m        22 May 14 05:25 wrapper_checkpoint.txt
[2026-05-14 05:25:52] -rw------- 1 m m      4746 May 14 05:25 pilotlog.txt
[2026-05-14 05:25:52] -rw------- 1 m m     75716 May 14 05:25 log.50250192._008771.job.log.1
[2026-05-14 05:25:52] -rw------- 1 m m       188 May 14 05:25 output.list
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m       410 May 14 05:25 runtime_log
[2026-05-14 05:25:52] -rw------- 1 m m    112640 May 14 05:25 result.tar.gz
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m      8198 May 14 05:25 runtime_log.err
[2026-05-14 05:25:52] -rw------- 1 m m       623 May 14 05:25 7c1168c7667f.diag
[2026-05-14 05:25:52] -rw-rw-r-- 1 m m     21268 May 14 05:25 stderr.txt
[2026-05-14 05:25:52] No HITS result produced
[2026-05-14 05:25:52]  *** Contents of shared directory: ***
[2026-05-14 05:25:52] total 102744
[2026-05-14 05:25:52] -rw-r--r-- 2 m m     15667 May 14 05:21 start_atlas.sh
[2026-05-14 05:25:52] -rw-r--r-- 2 m m    697435 May 14 05:21 input.tar.gz
[2026-05-14 05:25:52] -rw-r--r-- 2 m m 104371718 May 14 05:21 ATLAS.root_0
[2026-05-14 05:25:52] -rw------- 1 m m    112640 May 14 05:25 result.tar.gz
05:25:53 (123037): run_atlas exited; CPU time 20.605293
05:25:53 (123037): called boinc_finish(0)

</stderr_txt>
]]>

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