Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:26:59 (2920230): wrapper (7.7.26015): starting
02:26:59 (2920230): wrapper: running run_atlas (--nthreads 8)
[2026-05-14 02:26:59] Arguments: --nthreads 8
[2026-05-14 02:26:59] Threads: 8
[2026-05-14 02:26:59] Checking for CVMFS
[2026-05-14 02:26:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 02:26:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 02:26:59] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 02:26:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 02:26:59] 2.13.3.0 6169 19724 267164 159512 0 194 38126141 40960001 14678 16776704 0 73538380 99.601 77037165 36188 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-14 02:26:59] CVMFS is ok
[2026-05-14 02:26:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 02:26:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 02:26:59] Further information can be found at the LHC@home message board.
[2026-05-14 02:26:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 02:26:59] Checking for apptainer binary...
[2026-05-14 02:26:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 02:26:59] Running /usr/bin/apptainer --version
[2026-05-14 02:26:59] apptainer version 1.4.5-3.el9
[2026-05-14 02:26:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 02:26:59] c6-1-26-3.aglt2.org
[2026-05-14 02:26:59] apptainer works
[2026-05-14 02:26:59] Set ATHENA_PROC_NUMBER=8
[2026-05-14 02:26:59] Set ATHENA_CORE_NUMBER=8
[2026-05-14 02:26:59] Starting ATLAS job with PandaID=7138717824
[2026-05-14 02:26:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 02:30:34]  *** The last 200 lines of the pilot log: ***
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | WARNING  | found no stored workdir sizes
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 02:30:34] 2026-05-14 06:30:02,439 | WARNING  | wrong length of table data, x=[1778740059.0], y=[1684.0] (must be same and length>=4)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | could have reported an average CPU frequency of 2778 MHz (4 samples)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | ..............................
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . Timing measurements:
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . get job = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . initial setup = 6 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . payload setup = 8 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . stage-in = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . payload execution = 24 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | . stage-out = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | . log creation = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | ..............................
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138717824/pilotlog.txt
[2026-05-14 02:30:34] 2026-05-14 06:30:02,458 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 02:30:34] - Log from pilotlog.txt -
[2026-05-14 02:30:34] 2026-05-14 06:30:02,437 | INFO     | extracted standard info from prmon json
[2026-05-14 02:30:34] 2026-05-14 06:30:02,437 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | WARNING  | found no stored workdir sizes
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 02:30:34] 2026-05-14 06:30:02,439 | WARNING  | wrong length of table data, x=[1778740059.0], y=[1684.0] (must be same and length>=4)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | could have reported an average CPU frequency of 2778 MHz (4 samples)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | ..............................
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . Timing measurements:
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . get job = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . initial setup = 6 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . payload setup = 8 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . stage-in = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . payload execution = 24 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | . stage-out = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | . log creation = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | ..............................
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138717824/pilotlog.txt
[2026-05-14 02:30:34] 2026-05-14 06:30:02,458 | WARNING  | 
[2026-05-14 02:30:34] [begin log extracts]
[2026-05-14 02:30:34] - Log from pilotlog.txt -
[2026-05-14 02:30:34] 2026-05-14 06:30:02,437 | INFO     | extracted standard info from prmon json
[2026-05-14 02:30:34] 2026-05-14 06:30:02,437 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | WARNING  | found no stored workdir sizes
[2026-05-14 02:30:34] 2026-05-14 06:30:02,438 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 02:30:34] 2026-05-14 06:30:02,439 | WARNING  | wrong length of table data, x=[1778740059.0], y=[1684.0] (must be same and length>=4)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | could have reported an average CPU frequency of 2778 MHz (4 samples)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | ..............................
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . Timing measurements:
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . get job = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . initial setup = 6 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . payload setup = 8 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . stage-in = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,440 | INFO     | . payload execution = 24 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | . stage-out = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | . log creation = 0 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | ..............................
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 02:30:34] 2026-05-14 06:30:02,441 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138717824/pilotlog.txt
[2026-05-14 02:30:34] [end log extracts]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,458 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,459 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | 
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | job summary report
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | --------------------------------------------------
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | PanDA job id: 7138717824
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | task id: 50250192
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 06:27:55,157 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | pilot state: failed 
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | transexitcode: 65
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | exeerrorcode: 65
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,549 | INFO     | exitcode: 65
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | cpuconsumptiontime: 24 s
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | nevents: 0
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | neventsw: 0
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | pid: 2940230
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | pgrp: 2940230
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | corecount: 8
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | event service: False
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | sizes: {0: 2265930, 1: 2267504, 11: 2267532, 36: 2290908, 37: 2290884, 38: 2295207, 40: 2295363, 156: 2295529}
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | --------------------------------------------------
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | 
[2026-05-14 02:30:34] 2026-05-14 06:30:02,550 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-05-14 02:30:34] 2026-05-14 06:30:02,571 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,573 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,573 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 02:30:34] 2026-05-14 06:30:02,573 | INFO     | job 7138717824 has completed (purged errors)
[2026-05-14 02:30:34] 2026-05-14 06:30:02,573 | INFO     | overall cleanup function is called
[2026-05-14 02:30:34] 2026-05-14 06:30:03,579 | INFO     | --- collectZombieJob: --- 10, [2940230]
[2026-05-14 02:30:34] 2026-05-14 06:30:03,580 | INFO     | zombie collector waiting for pid 2940230
[2026-05-14 02:30:34] 2026-05-14 06:30:03,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 02:30:34] 2026-05-14 06:30:03,580 | INFO     | collected zombie processes
[2026-05-14 02:30:34] 2026-05-14 06:30:03,580 | INFO     | will attempt to kill all subprocesses of pid=2940230
[2026-05-14 02:30:34] 2026-05-14 06:30:03,896 | INFO     | process IDs to be killed: [2940230] (in reverse order)
[2026-05-14 02:30:34] 2026-05-14 06:30:04,003 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 02:30:34] 2026-05-14 06:30:04,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 02:30:34] 2026-05-14 06:30:04,015 | INFO     | did not find any defunct processes belonging to 2940230
[2026-05-14 02:30:34] 2026-05-14 06:30:04,027 | INFO     | did not find any defunct processes belonging to 2940230
[2026-05-14 02:30:34] 2026-05-14 06:30:04,027 | INFO     | Ready for new job
[2026-05-14 02:30:34] 2026-05-14 06:30:04,029 | INFO     | ***************************************
[2026-05-14 02:30:34] 2026-05-14 06:30:04,030 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 02:30:34] 2026-05-14 06:30:04,030 | INFO     | ***************************************
[2026-05-14 02:30:34] 2026-05-14 06:30:04,030 | INFO     | 
[2026-05-14 02:30:34] 2026-05-14 06:30:04,033 | INFO     | architecture information:
[2026-05-14 02:30:34] 2026-05-14 06:30:04,034 | INFO     | executing command: cat /etc/os-release
[2026-05-14 02:30:34] 2026-05-14 06:30:04,046 | INFO     | cat /etc/os-release:
[2026-05-14 02:30:34] NAME="CentOS Linux"
[2026-05-14 02:30:34] VERSION="7 (Core)"
[2026-05-14 02:30:34] ID="centos"
[2026-05-14 02:30:34] ID_LIKE="rhel fedora"
[2026-05-14 02:30:34] VERSION_ID="7"
[2026-05-14 02:30:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 02:30:34] ANSI_COLOR="0;31"
[2026-05-14 02:30:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 02:30:34] HOME_URL="https://www.centos.org/"
[2026-05-14 02:30:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 02:30:34] 
[2026-05-14 02:30:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 02:30:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 02:30:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 02:30:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 02:30:34] 
[2026-05-14 02:30:34] 2026-05-14 06:30:04,047 | INFO     | ***************************************
[2026-05-14 02:30:34] 2026-05-14 06:30:04,549 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-05-14 02:30:34] 2026-05-14 06:30:04,566 | INFO     | sufficient remaining disk space (75637981184 B)
[2026-05-14 02:30:34] 2026-05-14 06:30:04,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 02:30:34] 2026-05-14 06:30:04,567 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 02:30:34] 2026-05-14 06:30:04,567 | INFO     | update_server=False
[2026-05-14 02:30:34] 2026-05-14 06:30:04,568 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 02:30:34] 2026-05-14 06:30:04,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 02:30:34] 2026-05-14 06:30:04,569 | INFO     | aborting loop
[2026-05-14 02:30:34] 2026-05-14 06:30:04,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 02:30:34] 2026-05-14 06:30:04,872 | INFO     | all data control threads have been joined
[2026-05-14 02:30:34] 2026-05-14 06:30:05,049 | INFO     | all payload control threads have been joined
[2026-05-14 02:30:34] 2026-05-14 06:30:05,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 02:30:34] 2026-05-14 06:30:05,567 | INFO     | all job control threads have been joined
[2026-05-14 02:30:34] 2026-05-14 06:30:05,573 | INFO     | [job] retrieve thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:05,574 | INFO     | [job] job monitor thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:05,614 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:05,725 | INFO     | [payload] validate_post thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:05,838 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:05,878 | INFO     | [data] control thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:06,054 | INFO     | [payload] control thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:06,314 | INFO     | [payload] failed_post thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:06,343 | INFO     | [job] validate thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:06,572 | INFO     | [job] control thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:06,588 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:06,789 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:06,832 | INFO     | [data] copytool_out thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:06,968 | INFO     | [data] copytool_in thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:07,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 02:30:34] 2026-05-14 06:30:08,564 | INFO     | [job] queue monitor thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:09,467 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 02:30:34] 2026-05-14 06:30:15,061 | INFO     | [monitor] cgroup control has ended
[2026-05-14 02:30:34] 2026-05-14 06:30:15,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660474758976)>', '<ExcThread(monitor, started 139660047148800)>']
[2026-05-14 02:30:34] 2026-05-14 06:30:20,889 | INFO     | all workflow threads have been joined
[2026-05-14 02:30:34] 2026-05-14 06:30:20,890 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 02:30:34] 2026-05-14 06:30:20,890 | INFO     | traces error code: 0
[2026-05-14 02:30:34] 2026-05-14 06:30:20,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 02:30:34] 2026-05-14 06:30:34,301 | INFO     | PID=2930534 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 02:30:34] 2026-05-14 06:30:34,302 | INFO     | .. there are 15 such processes running
[2026-05-14 02:30:34] 2026-05-14 06:30:34,303 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 02:30:34] 2026-05-14 06:30:34,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 02:30:34] 2026-05-14 06:30:34,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 02:30:34] 2026-05-14 06:30:34,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 02:30:34] 2026-05-14 06:30:34,303 | INFO     | [monitor] control thread has ended
[2026-05-14 02:30:34] 2026-05-14 06:30:34,432 [wrapper] ==== pilot stdout END ====
[2026-05-14 02:30:34] 2026-05-14 06:30:34,436 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 02:30:34] 2026-05-14 06:30:34,440 [wrapper] pilotpid: 2930534
[2026-05-14 02:30:34] 2026-05-14 06:30:34,442 [wrapper] Pilot exit status: 0
[2026-05-14 02:30:34] 2026-05-14 06:30:34,450 [wrapper] pandaids: 7138717824
[2026-05-14 02:30:34] 2026-05-14 06:30:34,500 [wrapper] cleanup supervisor_pilot 2930541 2930535
[2026-05-14 02:30:34] 2026-05-14 06:30:34,502 [wrapper] Test setup, not cleaning
[2026-05-14 02:30:34] 2026-05-14 06:30:34,504 [wrapper] apfmon messages muted
[2026-05-14 02:30:34] 2026-05-14 06:30:34,507 [wrapper] ==== wrapper stdout END ====
[2026-05-14 02:30:34] 2026-05-14 06:30:34,509 [wrapper] ==== wrapper stderr END ====
[2026-05-14 02:30:34]  *** Error codes and diagnostics ***
[2026-05-14 02:30:34]     "exeErrorCode": 65,
[2026-05-14 02:30:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 02:30:34]     "pilotErrorCode": 1305,
[2026-05-14 02:30:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 02:30:34]  *** Listing of results directory ***
[2026-05-14 02:30:34] total 106252
[2026-05-14 02:30:34] -rwx------. 1 boincer umatlas     36281 May 13 23:09 runpilot2-wrapper.sh
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas    683926 May 14 00:07 pilot3.tar.gz
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas      5631 May 14 00:09 queuedata.json
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas       100 May 14 02:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 02:30:34] -rwxr-xr-x. 1 boincer umatlas      7986 May 14 02:26 run_atlas
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas       105 May 14 02:26 job.xml
[2026-05-14 02:30:34] -rw-r--r--. 2 boincer umatlas 104480081 May 14 02:26 EVNT.50238157._000541.pool.root.1
[2026-05-14 02:30:34] -rw-r--r--. 2 boincer umatlas     15667 May 14 02:26 start_atlas.sh
[2026-05-14 02:30:34] drwxrwx--x. 2 boincer umatlas      4096 May 14 02:26 shared
[2026-05-14 02:30:34] -rw-r--r--. 2 boincer umatlas    697449 May 14 02:26 input.tar.gz
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas         0 May 14 02:26 boinc_lockfile
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas      2561 May 14 02:26 pandaJob.out
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas        57 May 14 02:27 setup.sh.local
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas    992945 May 14 02:27 agis_schedconf.cvmfs.json
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas   1502367 May 14 02:27 agis_ddmendpoints.agis.ALL.json
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas       442 May 14 02:27 workernode_map.json
[2026-05-14 02:30:34] drwx------. 5 boincer umatlas      4096 May 14 02:27 pilot3
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas      6748 May 14 02:27 init_data.xml
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas       481 May 14 02:27 boinc_task_state.xml
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas       975 May 14 02:27 memory_monitor_summary.json
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas     20863 May 14 02:28 log.50250192._022912.job.log.tgz.1
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas      7106 May 14 02:30 heartbeat_new.json
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas      7068 May 14 02:30 heartbeat.json
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas      8192 May 14 02:30 boinc_mmap_file
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas        23 May 14 02:30 wrapper_checkpoint.txt
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas       823 May 14 02:30 pilotlog.txt
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas        95 May 14 02:30 pilot_heartbeat.json
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas     80476 May 14 02:30 log.50250192._022912.job.log.1
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas       188 May 14 02:30 output.list
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas       410 May 14 02:30 runtime_log
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas    122880 May 14 02:30 result.tar.gz
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas      8816 May 14 02:30 runtime_log.err
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas       639 May 14 02:30 3cf4d7999527.diag
[2026-05-14 02:30:34] -rw-r--r--. 1 boincer umatlas     21643 May 14 02:30 stderr.txt
[2026-05-14 02:30:34] No HITS result produced
[2026-05-14 02:30:34]  *** Contents of shared directory: ***
[2026-05-14 02:30:34] total 102856
[2026-05-14 02:30:34] -rw-r--r--. 2 boincer umatlas 104480081 May 14 02:26 ATLAS.root_0
[2026-05-14 02:30:34] -rw-r--r--. 2 boincer umatlas     15667 May 14 02:26 start_atlas.sh
[2026-05-14 02:30:34] -rw-r--r--. 2 boincer umatlas    697449 May 14 02:26 input.tar.gz
[2026-05-14 02:30:34] -rw-------. 1 boincer umatlas    122880 May 14 02:30 result.tar.gz
02:30:36 (2920230): run_atlas exited; CPU time 25.886154
02:30:36 (2920230): called boinc_finish(0)

</stderr_txt>
]]>

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