Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:45:16 (3148734): wrapper (7.7.26015): starting
23:45:16 (3148734): wrapper: running run_atlas (--nthreads 11)
[2026-05-13 23:45:16] Arguments: --nthreads 11
[2026-05-13 23:45:16] Threads: 11
[2026-05-13 23:45:16] Checking for CVMFS
[2026-05-13 23:45:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 23:45:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 23:45:16] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 23:45:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 23:45:17] 2.13.3.0 12348 19550 213912 159508 0 685 25043072 40960000 20852 16776704 0 112555764 99.610 112743367 34496 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-13 23:45:17] CVMFS is ok
[2026-05-13 23:45:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 23:45:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 23:45:17] Further information can be found at the LHC@home message board.
[2026-05-13 23:45:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 23:45:17] Checking for apptainer binary...
[2026-05-13 23:45:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-13 23:45:17] Running /usr/bin/apptainer --version
[2026-05-13 23:45:17] apptainer version 1.4.5-3.el9
[2026-05-13 23:45:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 23:45:17] c7-3-35.aglt2.org
[2026-05-13 23:45:17] apptainer works
[2026-05-13 23:45:17] Set ATHENA_PROC_NUMBER=11
[2026-05-13 23:45:17] Set ATHENA_CORE_NUMBER=11
[2026-05-13 23:45:17] Starting ATLAS job with PandaID=7138669247
[2026-05-13 23:45:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 23:49:45]  *** The last 200 lines of the pilot log: ***
[2026-05-13 23:49:45] 2026-05-14 03:48:42,951 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 23:49:45] 2026-05-14 03:48:42,951 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | WARNING  | found no stored workdir sizes
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | WARNING  | wrong length of table data, x=[1778730369.0], y=[2555.0] (must be same and length>=4)
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | INFO     | could have reported an average CPU frequency of 3139 MHz (4 samples)
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | INFO     | ..............................
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . Timing measurements:
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . get job = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . initial setup = 9 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . payload setup = 17 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . stage-in = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . payload execution = 37 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . stage-out = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . log creation = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | ..............................
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 23:49:45] 2026-05-14 03:48:42,954 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138669247/pilotlog.txt
[2026-05-13 23:49:45] 2026-05-14 03:48:42,976 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 23:49:45] - Log from pilotlog.txt -
[2026-05-13 23:49:45] 2026-05-14 03:48:42,951 | INFO     | extracted standard info from prmon json
[2026-05-13 23:49:45] 2026-05-14 03:48:42,951 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 23:49:45] 2026-05-14 03:48:42,951 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 23:49:45] 2026-05-14 03:48:42,951 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | WARNING  | found no stored workdir sizes
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | WARNING  | wrong length of table data, x=[1778730369.0], y=[2555.0] (must be same and length>=4)
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | INFO     | could have reported an average CPU frequency of 3139 MHz (4 samples)
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | INFO     | ..............................
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . Timing measurements:
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . get job = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . initial setup = 9 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . payload setup = 17 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . stage-in = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . payload execution = 37 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . stage-out = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . log creation = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | ..............................
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 23:49:45] 2026-05-14 03:48:42,954 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138669247/pilotlog.txt
[2026-05-13 23:49:45] 2026-05-14 03:48:42,976 | WARNING  | 
[2026-05-13 23:49:45] [begin log extracts]
[2026-05-13 23:49:45] - Log from pilotlog.txt -
[2026-05-13 23:49:45] 2026-05-14 03:48:42,951 | INFO     | extracted standard info from prmon json
[2026-05-13 23:49:45] 2026-05-14 03:48:42,951 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 23:49:45] 2026-05-14 03:48:42,951 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 23:49:45] 2026-05-14 03:48:42,951 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | WARNING  | found no stored workdir sizes
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | WARNING  | wrong length of table data, x=[1778730369.0], y=[2555.0] (must be same and length>=4)
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | INFO     | could have reported an average CPU frequency of 3139 MHz (4 samples)
[2026-05-13 23:49:45] 2026-05-14 03:48:42,952 | INFO     | ..............................
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . Timing measurements:
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . get job = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . initial setup = 9 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . payload setup = 17 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . stage-in = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . payload execution = 37 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . stage-out = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | . log creation = 0 s
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | ..............................
[2026-05-13 23:49:45] 2026-05-14 03:48:42,953 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 23:49:45] 2026-05-14 03:48:42,954 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138669247/pilotlog.txt
[2026-05-13 23:49:45] [end log extracts]
[2026-05-13 23:49:45] 2026-05-14 03:48:42,976 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 23:49:45] 2026-05-14 03:48:42,977 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 23:49:45] 2026-05-14 03:48:43,133 | INFO     | 
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | job summary report
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | --------------------------------------------------
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | PanDA job id: 7138669247
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | task id: 50250192
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 03:46:32,641 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | pilot state: failed 
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | transexitcode: 65
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | exeerrorcode: 65
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | exitcode: 65
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 23:49:45] 2026-05-14 03:48:43,134 | INFO     | cpuconsumptiontime: 28 s
[2026-05-13 23:49:45] 2026-05-14 03:48:43,135 | INFO     | nevents: 0
[2026-05-13 23:49:45] 2026-05-14 03:48:43,135 | INFO     | neventsw: 0
[2026-05-13 23:49:45] 2026-05-14 03:48:43,135 | INFO     | pid: 3169493
[2026-05-13 23:49:45] 2026-05-14 03:48:43,135 | INFO     | pgrp: 3169493
[2026-05-13 23:49:45] 2026-05-14 03:48:43,135 | INFO     | corecount: 11
[2026-05-13 23:49:45] 2026-05-14 03:48:43,135 | INFO     | event service: False
[2026-05-13 23:49:45] 2026-05-14 03:48:43,135 | INFO     | sizes: {0: 2264992, 1: 2267478, 2: 2267478, 59: 2291004, 60: 2295299, 63: 2295327, 181: 2295621}
[2026-05-13 23:49:45] 2026-05-14 03:48:43,135 | INFO     | --------------------------------------------------
[2026-05-13 23:49:45] 2026-05-14 03:48:43,135 | INFO     | 
[2026-05-13 23:49:45] 2026-05-14 03:48:43,135 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-05-13 23:49:45] 2026-05-14 03:48:43,218 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,219 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,219 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,219 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,219 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,219 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,219 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,219 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | job 7138669247 has completed (purged errors)
[2026-05-13 23:49:45] 2026-05-14 03:48:43,220 | INFO     | overall cleanup function is called
[2026-05-13 23:49:45] 2026-05-14 03:48:44,222 | INFO     | --- collectZombieJob: --- 10, [3169493]
[2026-05-13 23:49:45] 2026-05-14 03:48:44,222 | INFO     | zombie collector waiting for pid 3169493
[2026-05-13 23:49:45] 2026-05-14 03:48:44,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 23:49:45] 2026-05-14 03:48:44,223 | INFO     | collected zombie processes
[2026-05-13 23:49:45] 2026-05-14 03:48:44,223 | INFO     | will attempt to kill all subprocesses of pid=3169493
[2026-05-13 23:49:45] 2026-05-14 03:48:44,726 | INFO     | process IDs to be killed: [3169493] (in reverse order)
[2026-05-13 23:49:45] 2026-05-14 03:48:44,972 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 23:49:45] 2026-05-14 03:48:44,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 23:49:45] 2026-05-14 03:48:44,997 | INFO     | did not find any defunct processes belonging to 3169493
[2026-05-13 23:49:45] 2026-05-14 03:48:45,018 | INFO     | did not find any defunct processes belonging to 3169493
[2026-05-13 23:49:45] 2026-05-14 03:48:45,018 | INFO     | Ready for new job
[2026-05-13 23:49:45] 2026-05-14 03:48:45,020 | INFO     | ***************************************
[2026-05-13 23:49:45] 2026-05-14 03:48:45,020 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 23:49:45] 2026-05-14 03:48:45,020 | INFO     | ***************************************
[2026-05-13 23:49:45] 2026-05-14 03:48:45,020 | INFO     | 
[2026-05-13 23:49:45] 2026-05-14 03:48:45,025 | INFO     | architecture information:
[2026-05-13 23:49:45] 2026-05-14 03:48:45,025 | INFO     | executing command: cat /etc/os-release
[2026-05-13 23:49:45] 2026-05-14 03:48:45,041 | INFO     | cat /etc/os-release:
[2026-05-13 23:49:45] NAME="CentOS Linux"
[2026-05-13 23:49:45] VERSION="7 (Core)"
[2026-05-13 23:49:45] ID="centos"
[2026-05-13 23:49:45] ID_LIKE="rhel fedora"
[2026-05-13 23:49:45] VERSION_ID="7"
[2026-05-13 23:49:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 23:49:45] ANSI_COLOR="0;31"
[2026-05-13 23:49:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 23:49:45] HOME_URL="https://www.centos.org/"
[2026-05-13 23:49:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 23:49:45] 
[2026-05-13 23:49:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 23:49:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 23:49:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 23:49:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 23:49:45] 
[2026-05-13 23:49:45] 2026-05-14 03:48:45,042 | INFO     | ***************************************
[2026-05-13 23:49:45] 2026-05-14 03:48:45,546 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-05-13 23:49:45] 2026-05-14 03:48:45,572 | INFO     | sufficient remaining disk space (129761280000 B)
[2026-05-13 23:49:45] 2026-05-14 03:48:45,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 23:49:45] 2026-05-14 03:48:45,573 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 23:49:45] 2026-05-14 03:48:45,573 | INFO     | update_server=False
[2026-05-13 23:49:45] 2026-05-14 03:48:45,573 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 23:49:45] 2026-05-14 03:48:45,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 23:49:45] 2026-05-14 03:48:45,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 23:49:45] 2026-05-14 03:48:45,614 | INFO     | aborting loop
[2026-05-13 23:49:45] 2026-05-14 03:48:45,729 | INFO     | all payload control threads have been joined
[2026-05-13 23:49:45] 2026-05-14 03:48:45,853 | INFO     | all data control threads have been joined
[2026-05-13 23:49:45] 2026-05-14 03:48:46,579 | INFO     | [job] retrieve thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:46,590 | INFO     | all job control threads have been joined
[2026-05-13 23:49:45] 2026-05-14 03:48:46,619 | INFO     | [job] job monitor thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:46,682 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:46,735 | INFO     | [payload] control thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:46,860 | INFO     | [data] control thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:46,951 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:47,222 | INFO     | [payload] failed_post thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:47,253 | INFO     | [data] copytool_in thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:47,379 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:47,580 | INFO     | [data] copytool_out thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:47,596 | INFO     | [job] control thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:47,878 | INFO     | [job] validate thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:47,928 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:48,143 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 23:49:45] 2026-05-14 03:48:48,157 | INFO     | [payload] validate_post thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:48,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 23:49:45] 2026-05-14 03:48:49,149 | INFO     | [job] queue monitor thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:48:52,215 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 23:49:45] 2026-05-14 03:49:15,044 | INFO     | PID=3154682 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-13 23:49:45] 2026-05-14 03:49:15,044 | INFO     | .. there are 29 such processes running
[2026-05-13 23:49:45] 2026-05-14 03:49:15,044 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 23:49:45] 2026-05-14 03:49:15,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 23:49:45] 2026-05-14 03:49:15,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 23:49:45] 2026-05-14 03:49:39,698 | INFO     | [monitor] cgroup control has ended
[2026-05-13 23:49:45] 2026-05-14 03:49:40,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587303438144)>', '<ExcThread(monitor, started 140586963171072)>']
[2026-05-13 23:49:45] 2026-05-14 03:49:41,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 23:49:45] 2026-05-14 03:49:41,188 | INFO     | [monitor] control thread has ended
[2026-05-13 23:49:45] 2026-05-14 03:49:45,397 | INFO     | all workflow threads have been joined
[2026-05-13 23:49:45] 2026-05-14 03:49:45,397 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 23:49:45] 2026-05-14 03:49:45,397 | INFO     | traces error code: 0
[2026-05-13 23:49:45] 2026-05-14 03:49:45,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 23:49:45] 2026-05-14 03:49:45,546 [wrapper] ==== pilot stdout END ====
[2026-05-13 23:49:45] 2026-05-14 03:49:45,549 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 23:49:45] 2026-05-14 03:49:45,552 [wrapper] pilotpid: 3154682
[2026-05-13 23:49:45] 2026-05-14 03:49:45,555 [wrapper] Pilot exit status: 0
[2026-05-13 23:49:45] 2026-05-14 03:49:45,567 [wrapper] pandaids: 7138669247
[2026-05-13 23:49:45] 2026-05-14 03:49:45,680 [wrapper] cleanup supervisor_pilot 3154692 3154684
[2026-05-13 23:49:45] 2026-05-14 03:49:45,684 [wrapper] Test setup, not cleaning
[2026-05-13 23:49:45] 2026-05-14 03:49:45,687 [wrapper] apfmon messages muted
[2026-05-13 23:49:45] 2026-05-14 03:49:45,690 [wrapper] ==== wrapper stdout END ====
[2026-05-13 23:49:45] 2026-05-14 03:49:45,693 [wrapper] ==== wrapper stderr END ====
[2026-05-13 23:49:45]  *** Error codes and diagnostics ***
[2026-05-13 23:49:45]     "exeErrorCode": 65,
[2026-05-13 23:49:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 23:49:45]     "pilotErrorCode": 1305,
[2026-05-13 23:49:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 23:49:45]  *** Listing of results directory ***
[2026-05-13 23:49:45] total 106364
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas    683926 May 13 19:00 pilot3.tar.gz
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas      5631 May 13 19:03 queuedata.json
[2026-05-13 23:49:45] -rwx------. 1 boincer umatlas     36281 May 13 19:04 runpilot2-wrapper.sh
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas       100 May 13 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 23:49:45] -rwxr-xr-x. 1 boincer umatlas      7986 May 13 23:45 run_atlas
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas       105 May 13 23:45 job.xml
[2026-05-13 23:49:45] -rw-r--r--. 2 boincer umatlas 104584243 May 13 23:45 EVNT.50238157._000397.pool.root.1
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas      6867 May 13 23:45 init_data.xml
[2026-05-13 23:49:45] -rw-r--r--. 2 boincer umatlas     15667 May 13 23:45 start_atlas.sh
[2026-05-13 23:49:45] drwxrwx--x. 2 boincer umatlas      4096 May 13 23:45 shared
[2026-05-13 23:49:45] -rw-r--r--. 2 boincer umatlas    697436 May 13 23:45 input.tar.gz
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas         0 May 13 23:45 boinc_lockfile
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas      2559 May 13 23:45 pandaJob.out
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas        57 May 13 23:45 setup.sh.local
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas    999061 May 13 23:45 agis_schedconf.cvmfs.json
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas   1502367 May 13 23:45 agis_ddmendpoints.agis.ALL.json
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas       428 May 13 23:45 workernode_map.json
[2026-05-13 23:49:45] drwx------. 5 boincer umatlas      4096 May 13 23:45 pilot3
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas       481 May 13 23:46 boinc_task_state.xml
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas       952 May 13 23:46 memory_monitor_summary.json
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas     20928 May 13 23:46 log.50250192._019578.job.log.tgz.1
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas        95 May 13 23:48 pilot_heartbeat.json
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas      7044 May 13 23:48 heartbeat_new.json
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas      7006 May 13 23:48 heartbeat.json
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas        23 May 13 23:49 wrapper_checkpoint.txt
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas      8192 May 13 23:49 boinc_mmap_file
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas      4824 May 13 23:49 pilotlog.txt
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas     82276 May 13 23:49 log.50250192._019578.job.log.1
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas       188 May 13 23:49 output.list
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas       410 May 13 23:49 runtime_log
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas    122880 May 13 23:49 result.tar.gz
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas      8808 May 13 23:49 runtime_log.err
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas       637 May 13 23:49 0383f268cf57.diag
[2026-05-13 23:49:45] -rw-r--r--. 1 boincer umatlas     21640 May 13 23:49 stderr.txt
[2026-05-13 23:49:45] No HITS result produced
[2026-05-13 23:49:45]  *** Contents of shared directory: ***
[2026-05-13 23:49:45] total 102956
[2026-05-13 23:49:45] -rw-r--r--. 2 boincer umatlas 104584243 May 13 23:45 ATLAS.root_0
[2026-05-13 23:49:45] -rw-r--r--. 2 boincer umatlas     15667 May 13 23:45 start_atlas.sh
[2026-05-13 23:49:45] -rw-r--r--. 2 boincer umatlas    697436 May 13 23:45 input.tar.gz
[2026-05-13 23:49:45] -rw-------. 1 boincer umatlas    122880 May 13 23:49 result.tar.gz
23:49:47 (3148734): run_atlas exited; CPU time 28.804433
23:49:47 (3148734): called boinc_finish(0)

</stderr_txt>
]]>

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