Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:36:28 (29374): wrapper (7.7.26015): starting
23:36:28 (29374): wrapper: running run_atlas (--nthreads 8)
[2026-05-13 23:36:28] Arguments: --nthreads 8
[2026-05-13 23:36:28] Threads: 8
[2026-05-13 23:36:28] Checking for CVMFS
[2026-05-13 23:36:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 23:36:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 23:36:28] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 23:36:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 23:36:28] 2.11.2.0 3013 182107 83968 159508 1 186 16147664 20275200 1 130560 0 49770398 99.902 9041905 23096 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-13 23:36:28] CVMFS is ok
[2026-05-13 23:36:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 23:36:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 23:36:28] Further information can be found at the LHC@home message board.
[2026-05-13 23:36:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 23:36:28] Checking for apptainer binary...
[2026-05-13 23:36:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-13 23:36:28] Running /usr/bin/apptainer --version
[2026-05-13 23:36:28] apptainer version 1.3.2-1.el7
[2026-05-13 23:36:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 23:36:30] c-115-10.aglt2.org
[2026-05-13 23:36:30] apptainer works
[2026-05-13 23:36:30] Set ATHENA_PROC_NUMBER=8
[2026-05-13 23:36:30] Set ATHENA_CORE_NUMBER=8
[2026-05-13 23:36:30] Starting ATLAS job with PandaID=7138238564
[2026-05-13 23:36:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 23:41:02]  *** The last 200 lines of the pilot log: ***
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | WARNING  | found no stored workdir sizes
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | WARNING  | wrong length of table data, x=[1778729851.0], y=[979.0] (must be same and length>=4)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | could have reported an average CPU frequency of 1828 MHz (4 samples)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | ..............................
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . Timing measurements:
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . get job = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . initial setup = 8 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . payload setup = 17 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . stage-in = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . payload execution = 39 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . stage-out = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . log creation = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | ..............................
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138238564/pilotlog.txt
[2026-05-13 23:41:02] 2026-05-14 03:40:06,395 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 23:41:02] - Log from pilotlog.txt -
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | INFO     | extracted standard info from prmon json
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | WARNING  | found no stored workdir sizes
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | WARNING  | wrong length of table data, x=[1778729851.0], y=[979.0] (must be same and length>=4)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | could have reported an average CPU frequency of 1828 MHz (4 samples)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | ..............................
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . Timing measurements:
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . get job = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . initial setup = 8 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . payload setup = 17 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . stage-in = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . payload execution = 39 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . stage-out = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . log creation = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | ..............................
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138238564/pilotlog.txt
[2026-05-13 23:41:02] 2026-05-14 03:40:06,396 | WARNING  | 
[2026-05-13 23:41:02] [begin log extracts]
[2026-05-13 23:41:02] - Log from pilotlog.txt -
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | INFO     | extracted standard info from prmon json
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | WARNING  | found no stored workdir sizes
[2026-05-13 23:41:02] 2026-05-14 03:40:06,367 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | WARNING  | wrong length of table data, x=[1778729851.0], y=[979.0] (must be same and length>=4)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | could have reported an average CPU frequency of 1828 MHz (4 samples)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | ..............................
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . Timing measurements:
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . get job = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . initial setup = 8 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,368 | INFO     | . payload setup = 17 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . stage-in = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . payload execution = 39 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . stage-out = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | . log creation = 0 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | ..............................
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 23:41:02] 2026-05-14 03:40:06,369 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138238564/pilotlog.txt
[2026-05-13 23:41:02] [end log extracts]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,396 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,397 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 23:41:02] 2026-05-14 03:40:06,910 | INFO     | 
[2026-05-13 23:41:02] 2026-05-14 03:40:06,910 | INFO     | job summary report
[2026-05-13 23:41:02] 2026-05-14 03:40:06,910 | INFO     | --------------------------------------------------
[2026-05-13 23:41:02] 2026-05-14 03:40:06,910 | INFO     | PanDA job id: 7138238564
[2026-05-13 23:41:02] 2026-05-14 03:40:06,911 | INFO     | task id: 50250192
[2026-05-13 23:41:02] 2026-05-14 03:40:06,911 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 03:38:00,460 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 23:41:02] 2026-05-14 03:40:06,911 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 23:41:02] 2026-05-14 03:40:06,911 | INFO     | pilot state: failed 
[2026-05-13 23:41:02] 2026-05-14 03:40:06,911 | INFO     | transexitcode: 65
[2026-05-13 23:41:02] 2026-05-14 03:40:06,911 | INFO     | exeerrorcode: 65
[2026-05-13 23:41:02] 2026-05-14 03:40:06,912 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,912 | INFO     | exitcode: 65
[2026-05-13 23:41:02] 2026-05-14 03:40:06,912 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,912 | INFO     | cpuconsumptiontime: 27 s
[2026-05-13 23:41:02] 2026-05-14 03:40:06,912 | INFO     | nevents: 0
[2026-05-13 23:41:02] 2026-05-14 03:40:06,912 | INFO     | neventsw: 0
[2026-05-13 23:41:02] 2026-05-14 03:40:06,913 | INFO     | pid: 5299
[2026-05-13 23:41:02] 2026-05-14 03:40:06,913 | INFO     | pgrp: 5299
[2026-05-13 23:41:02] 2026-05-14 03:40:06,913 | INFO     | corecount: 8
[2026-05-13 23:41:02] 2026-05-14 03:40:06,913 | INFO     | event service: False
[2026-05-13 23:41:02] 2026-05-14 03:40:06,913 | INFO     | sizes: {0: 2267443, 11: 2267443, 60: 2290867, 61: 2290843, 62: 2295194, 179: 2295332}
[2026-05-13 23:41:02] 2026-05-14 03:40:06,913 | INFO     | --------------------------------------------------
[2026-05-13 23:41:02] 2026-05-14 03:40:06,914 | INFO     | 
[2026-05-13 23:41:02] 2026-05-14 03:40:06,914 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-13 23:41:02] 2026-05-14 03:40:06,947 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,948 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,948 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,948 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,951 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,951 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 23:41:02] 2026-05-14 03:40:06,952 | INFO     | job 7138238564 has completed (purged errors)
[2026-05-13 23:41:02] 2026-05-14 03:40:06,952 | INFO     | overall cleanup function is called
[2026-05-13 23:41:02] 2026-05-14 03:40:07,954 | INFO     | --- collectZombieJob: --- 10, [5299]
[2026-05-13 23:41:02] 2026-05-14 03:40:07,954 | INFO     | zombie collector waiting for pid 5299
[2026-05-13 23:41:02] 2026-05-14 03:40:07,954 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 23:41:02] 2026-05-14 03:40:07,954 | INFO     | collected zombie processes
[2026-05-13 23:41:02] 2026-05-14 03:40:07,955 | INFO     | will attempt to kill all subprocesses of pid=5299
[2026-05-13 23:41:02] 2026-05-14 03:40:08,031 | INFO     | process IDs to be killed: [5299] (in reverse order)
[2026-05-13 23:41:02] 2026-05-14 03:40:08,097 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 23:41:02] 2026-05-14 03:40:08,097 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 23:41:02] 2026-05-14 03:40:08,101 | INFO     | did not find any defunct processes belonging to 5299
[2026-05-13 23:41:02] 2026-05-14 03:40:08,105 | INFO     | did not find any defunct processes belonging to 5299
[2026-05-13 23:41:02] 2026-05-14 03:40:08,106 | INFO     | Ready for new job
[2026-05-13 23:41:02] 2026-05-14 03:40:08,107 | INFO     | ***************************************
[2026-05-13 23:41:02] 2026-05-14 03:40:08,107 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 23:41:02] 2026-05-14 03:40:08,107 | INFO     | ***************************************
[2026-05-13 23:41:02] 2026-05-14 03:40:08,107 | INFO     | 
[2026-05-13 23:41:02] 2026-05-14 03:40:08,108 | INFO     | architecture information:
[2026-05-13 23:41:02] 2026-05-14 03:40:08,109 | INFO     | executing command: cat /etc/os-release
[2026-05-13 23:41:02] 2026-05-14 03:40:08,128 | INFO     | cat /etc/os-release:
[2026-05-13 23:41:02] NAME="CentOS Linux"
[2026-05-13 23:41:02] VERSION="7 (Core)"
[2026-05-13 23:41:02] ID="centos"
[2026-05-13 23:41:02] ID_LIKE="rhel fedora"
[2026-05-13 23:41:02] VERSION_ID="7"
[2026-05-13 23:41:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 23:41:02] ANSI_COLOR="0;31"
[2026-05-13 23:41:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 23:41:02] HOME_URL="https://www.centos.org/"
[2026-05-13 23:41:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 23:41:02] 
[2026-05-13 23:41:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 23:41:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 23:41:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 23:41:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 23:41:02] 
[2026-05-13 23:41:02] 2026-05-14 03:40:08,128 | INFO     | ***************************************
[2026-05-13 23:41:02] 2026-05-14 03:40:08,630 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-13 23:41:02] 2026-05-14 03:40:08,651 | INFO     | sufficient remaining disk space (18969788416 B)
[2026-05-13 23:41:02] 2026-05-14 03:40:08,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 23:41:02] 2026-05-14 03:40:08,652 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 23:41:02] 2026-05-14 03:40:08,652 | INFO     | update_server=False
[2026-05-13 23:41:02] 2026-05-14 03:40:08,653 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 23:41:02] 2026-05-14 03:40:08,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 23:41:02] 2026-05-14 03:40:08,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 23:41:02] 2026-05-14 03:40:08,792 | INFO     | all data control threads have been joined
[2026-05-13 23:41:02] 2026-05-14 03:40:09,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 23:41:02] 2026-05-14 03:40:09,374 | INFO     | aborting loop
[2026-05-13 23:41:02] 2026-05-14 03:40:09,658 | INFO     | [job] retrieve thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:09,794 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:09,798 | INFO     | [data] control thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:09,805 | INFO     | all payload control threads have been joined
[2026-05-13 23:41:02] 2026-05-14 03:40:09,961 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:10,041 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:10,211 | INFO     | all job control threads have been joined
[2026-05-13 23:41:02] 2026-05-14 03:40:10,228 | INFO     | [data] copytool_in thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:10,340 | INFO     | [payload] validate_post thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:10,380 | INFO     | [job] job monitor thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:10,492 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:10,659 | INFO     | [data] copytool_out thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:10,811 | INFO     | [payload] control thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:10,922 | INFO     | [payload] failed_post thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:11,006 | INFO     | [job] validate thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:11,217 | INFO     | [job] control thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:11,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 23:41:02] 2026-05-14 03:40:12,499 | INFO     | [job] queue monitor thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:12,656 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 23:41:02] 2026-05-14 03:40:38,984 | INFO     | PID=680 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-05-13 23:41:02] 2026-05-14 03:40:38,985 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 23:41:02] 2026-05-14 03:40:38,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 23:41:02] 2026-05-14 03:40:38,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 23:41:02] 2026-05-14 03:40:55,616 | INFO     | [monitor] cgroup control has ended
[2026-05-13 23:41:02] 2026-05-14 03:40:56,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473502418752)>', '<ExcThread(monitor, started 140472399947520)>']
[2026-05-13 23:41:02] 2026-05-14 03:40:57,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 23:41:02] 2026-05-14 03:40:57,063 | INFO     | [monitor] control thread has ended
[2026-05-13 23:41:02] 2026-05-14 03:41:01,642 | INFO     | all workflow threads have been joined
[2026-05-13 23:41:02] 2026-05-14 03:41:01,643 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 23:41:02] 2026-05-14 03:41:01,644 | INFO     | traces error code: 0
[2026-05-13 23:41:02] 2026-05-14 03:41:01,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 23:41:02] 2026-05-14 03:41:01,765 [wrapper] ==== pilot stdout END ====
[2026-05-13 23:41:02] 2026-05-14 03:41:01,770 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 23:41:02] 2026-05-14 03:41:01,774 [wrapper] pilotpid: 680
[2026-05-13 23:41:02] 2026-05-14 03:41:01,779 [wrapper] Pilot exit status: 0
[2026-05-13 23:41:02] 2026-05-14 03:41:01,796 [wrapper] pandaids: 7138238564
[2026-05-13 23:41:02] 2026-05-14 03:41:01,842 [wrapper] cleanup supervisor_pilot   686 681
[2026-05-13 23:41:02] 2026-05-14 03:41:01,847 [wrapper] Test setup, not cleaning
[2026-05-13 23:41:02] 2026-05-14 03:41:01,852 [wrapper] apfmon messages muted
[2026-05-13 23:41:02] 2026-05-14 03:41:01,857 [wrapper] ==== wrapper stdout END ====
[2026-05-13 23:41:02] 2026-05-14 03:41:01,862 [wrapper] ==== wrapper stderr END ====
[2026-05-13 23:41:02]  *** Error codes and diagnostics ***
[2026-05-13 23:41:02]     "exeErrorCode": 65,
[2026-05-13 23:41:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 23:41:02]     "pilotErrorCode": 1305,
[2026-05-13 23:41:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 23:41:02]  *** Listing of results directory ***
[2026-05-13 23:41:02] total 106108
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas    683926 May 13 09:56 pilot3.tar.gz
[2026-05-13 23:41:02] -rwx------ 1 boincer umatlas     36281 May 13 10:01 runpilot2-wrapper.sh
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas      5631 May 13 10:02 queuedata.json
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas       100 May 13 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 23:41:02] -rwxr-xr-x 1 boincer umatlas      7986 May 13 23:36 run_atlas
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas       105 May 13 23:36 job.xml
[2026-05-13 23:41:02] -rw-r--r-- 2 boincer umatlas 104336653 May 13 23:36 EVNT.50238157._000007.pool.root.1
[2026-05-13 23:41:02] -rw-r--r-- 2 boincer umatlas     15667 May 13 23:36 start_atlas.sh
[2026-05-13 23:41:02] drwxrwx--x 2 boincer umatlas      4096 May 13 23:36 shared
[2026-05-13 23:41:02] -rw-r--r-- 2 boincer umatlas    697444 May 13 23:36 input.tar.gz
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas         0 May 13 23:36 boinc_lockfile
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas      2556 May 13 23:36 pandaJob.out
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas        57 May 13 23:36 setup.sh.local
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas    999061 May 13 23:36 agis_schedconf.cvmfs.json
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas   1502367 May 13 23:36 agis_ddmendpoints.agis.ALL.json
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas       433 May 13 23:36 workernode_map.json
[2026-05-13 23:41:02] drwx------ 5 boincer umatlas      4096 May 13 23:36 pilot3
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas       966 May 13 23:38 memory_monitor_summary.json
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas     20901 May 13 23:38 log.50250192._010240.job.log.tgz.1
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas       482 May 13 23:38 boinc_task_state.xml
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas        95 May 13 23:39 pilot_heartbeat.json
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas      7079 May 13 23:40 heartbeat_new.json
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas      7041 May 13 23:40 heartbeat.json
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas      5821 May 13 23:40 init_data.xml
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas      8192 May 13 23:40 boinc_mmap_file
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas        23 May 13 23:40 wrapper_checkpoint.txt
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas      4743 May 13 23:41 pilotlog.txt
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas     75972 May 13 23:41 log.50250192._010240.job.log.1
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas       188 May 13 23:41 output.list
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas       410 May 13 23:41 runtime_log
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas    112640 May 13 23:41 result.tar.gz
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas      8811 May 13 23:41 runtime_log.err
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas       643 May 13 23:41 8421bac9fd0d.diag
[2026-05-13 23:41:02] -rw-r--r-- 1 boincer umatlas     21582 May 13 23:41 stderr.txt
[2026-05-13 23:41:02] No HITS result produced
[2026-05-13 23:41:02]  *** Contents of shared directory: ***
[2026-05-13 23:41:02] total 102708
[2026-05-13 23:41:02] -rw-r--r-- 2 boincer umatlas 104336653 May 13 23:36 ATLAS.root_0
[2026-05-13 23:41:02] -rw-r--r-- 2 boincer umatlas     15667 May 13 23:36 start_atlas.sh
[2026-05-13 23:41:02] -rw-r--r-- 2 boincer umatlas    697444 May 13 23:36 input.tar.gz
[2026-05-13 23:41:02] -rw------- 1 boincer umatlas    112640 May 13 23:41 result.tar.gz
23:41:03 (29374): run_atlas exited; CPU time 27.967439
23:41:03 (29374): called boinc_finish(0)

</stderr_txt>
]]>

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