Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:09:06 (4497): wrapper (7.7.26015): starting
01:09:06 (4497): wrapper: running run_atlas (--nthreads 8)
[2026-05-14 01:09:06] Arguments: --nthreads 8
[2026-05-14 01:09:06] Threads: 8
[2026-05-14 01:09:06] Checking for CVMFS
[2026-05-14 01:09:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 01:09:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 01:09:06] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 01:09:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 01:09:06] 2.11.2.0 27562 576988 319452 159509 3 186 17766749 18432001 199 130560 7 858061548 99.454 1136178296 25800 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-05-14 01:09:06] CVMFS is ok
[2026-05-14 01:09:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 01:09:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 01:09:06] Further information can be found at the LHC@home message board.
[2026-05-14 01:09:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 01:09:06] Checking for apptainer binary...
[2026-05-14 01:09:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 01:09:06] Running /usr/bin/apptainer --version
[2026-05-14 01:09:06] apptainer version 1.3.2-1.el7
[2026-05-14 01:09:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 01:09:07] c-9-30.aglt2.org
[2026-05-14 01:09:07] apptainer works
[2026-05-14 01:09:07] Set ATHENA_PROC_NUMBER=8
[2026-05-14 01:09:07] Set ATHENA_CORE_NUMBER=8
[2026-05-14 01:09:07] Starting ATLAS job with PandaID=7138674239
[2026-05-14 01:09:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 01:12:31]  *** The last 200 lines of the pilot log: ***
[2026-05-14 01:12:31] 2026-05-14 05:11:58,205 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 01:12:31] 2026-05-14 05:11:58,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 01:12:31] 2026-05-14 05:11:58,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 01:12:31] 2026-05-14 05:11:58,206 | WARNING  | found no stored workdir sizes
[2026-05-14 01:12:31] 2026-05-14 05:11:58,206 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 01:12:31] 2026-05-14 05:11:58,207 | WARNING  | wrong length of table data, x=[1778735380.0], y=[1601.0] (must be same and length>=4)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,207 | INFO     | could have reported an average CPU frequency of 2998 MHz (4 samples)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | ..............................
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . Timing measurements:
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . get job = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . initial setup = 5 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . payload setup = 6 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . stage-in = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . payload execution = 20 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . stage-out = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . log creation = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | ..............................
[2026-05-14 01:12:31] 2026-05-14 05:11:58,210 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 01:12:31] 2026-05-14 05:11:58,210 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/3/PanDA_Pilot-7138674239/pilotlog.txt
[2026-05-14 01:12:31] 2026-05-14 05:11:58,229 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 01:12:31] - Log from pilotlog.txt -
[2026-05-14 01:12:31] 2026-05-14 05:11:58,205 | INFO     | extracted standard info from prmon json
[2026-05-14 01:12:31] 2026-05-14 05:11:58,205 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 01:12:31] 2026-05-14 05:11:58,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 01:12:31] 2026-05-14 05:11:58,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 01:12:31] 2026-05-14 05:11:58,206 | WARNING  | found no stored workdir sizes
[2026-05-14 01:12:31] 2026-05-14 05:11:58,206 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 01:12:31] 2026-05-14 05:11:58,207 | WARNING  | wrong length of table data, x=[1778735380.0], y=[1601.0] (must be same and length>=4)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,207 | INFO     | could have reported an average CPU frequency of 2998 MHz (4 samples)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | ..............................
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . Timing measurements:
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . get job = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . initial setup = 5 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . payload setup = 6 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . stage-in = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . payload execution = 20 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . stage-out = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . log creation = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | ..............................
[2026-05-14 01:12:31] 2026-05-14 05:11:58,210 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 01:12:31] 2026-05-14 05:11:58,210 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/3/PanDA_Pilot-7138674239/pilotlog.txt
[2026-05-14 01:12:31] 2026-05-14 05:11:58,230 | WARNING  | 
[2026-05-14 01:12:31] [begin log extracts]
[2026-05-14 01:12:31] - Log from pilotlog.txt -
[2026-05-14 01:12:31] 2026-05-14 05:11:58,205 | INFO     | extracted standard info from prmon json
[2026-05-14 01:12:31] 2026-05-14 05:11:58,205 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 01:12:31] 2026-05-14 05:11:58,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 01:12:31] 2026-05-14 05:11:58,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 01:12:31] 2026-05-14 05:11:58,206 | WARNING  | found no stored workdir sizes
[2026-05-14 01:12:31] 2026-05-14 05:11:58,206 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 01:12:31] 2026-05-14 05:11:58,207 | WARNING  | wrong length of table data, x=[1778735380.0], y=[1601.0] (must be same and length>=4)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,207 | INFO     | could have reported an average CPU frequency of 2998 MHz (4 samples)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | ..............................
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . Timing measurements:
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . get job = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . initial setup = 5 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,208 | INFO     | . payload setup = 6 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . stage-in = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . payload execution = 20 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . stage-out = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | . log creation = 0 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,209 | INFO     | ..............................
[2026-05-14 01:12:31] 2026-05-14 05:11:58,210 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 01:12:31] 2026-05-14 05:11:58,210 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/3/PanDA_Pilot-7138674239/pilotlog.txt
[2026-05-14 01:12:31] [end log extracts]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,230 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,231 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 01:12:31] 2026-05-14 05:11:58,324 | INFO     | 
[2026-05-14 01:12:31] 2026-05-14 05:11:58,324 | INFO     | job summary report
[2026-05-14 01:12:31] 2026-05-14 05:11:58,324 | INFO     | --------------------------------------------------
[2026-05-14 01:12:31] 2026-05-14 05:11:58,324 | INFO     | PanDA job id: 7138674239
[2026-05-14 01:12:31] 2026-05-14 05:11:58,325 | INFO     | task id: 50250192
[2026-05-14 01:12:31] 2026-05-14 05:11:58,325 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 05:09:53,159 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 01:12:31] 2026-05-14 05:11:58,325 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 01:12:31] 2026-05-14 05:11:58,325 | INFO     | pilot state: failed 
[2026-05-14 01:12:31] 2026-05-14 05:11:58,326 | INFO     | transexitcode: 65
[2026-05-14 01:12:31] 2026-05-14 05:11:58,326 | INFO     | exeerrorcode: 65
[2026-05-14 01:12:31] 2026-05-14 05:11:58,326 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,326 | INFO     | exitcode: 65
[2026-05-14 01:12:31] 2026-05-14 05:11:58,326 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,327 | INFO     | cpuconsumptiontime: 17 s
[2026-05-14 01:12:31] 2026-05-14 05:11:58,327 | INFO     | nevents: 0
[2026-05-14 01:12:31] 2026-05-14 05:11:58,327 | INFO     | neventsw: 0
[2026-05-14 01:12:31] 2026-05-14 05:11:58,327 | INFO     | pid: 39274
[2026-05-14 01:12:31] 2026-05-14 05:11:58,328 | INFO     | pgrp: 39274
[2026-05-14 01:12:31] 2026-05-14 05:11:58,328 | INFO     | corecount: 8
[2026-05-14 01:12:31] 2026-05-14 05:11:58,328 | INFO     | event service: False
[2026-05-14 01:12:31] 2026-05-14 05:11:58,328 | INFO     | sizes: {0: 2265703, 1: 2267532, 11: 2267532, 31: 2295291, 32: 2295291, 148: 2295457}
[2026-05-14 01:12:31] 2026-05-14 05:11:58,328 | INFO     | --------------------------------------------------
[2026-05-14 01:12:31] 2026-05-14 05:11:58,329 | INFO     | 
[2026-05-14 01:12:31] 2026-05-14 05:11:58,329 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-05-14 01:12:31] 2026-05-14 05:11:58,357 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,357 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,357 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,358 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,360 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,361 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 01:12:31] 2026-05-14 05:11:58,361 | INFO     | job 7138674239 has completed (purged errors)
[2026-05-14 01:12:31] 2026-05-14 05:11:58,361 | INFO     | overall cleanup function is called
[2026-05-14 01:12:31] 2026-05-14 05:11:59,368 | INFO     | --- collectZombieJob: --- 10, [39274]
[2026-05-14 01:12:31] 2026-05-14 05:11:59,368 | INFO     | zombie collector waiting for pid 39274
[2026-05-14 01:12:31] 2026-05-14 05:11:59,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 01:12:31] 2026-05-14 05:11:59,369 | INFO     | collected zombie processes
[2026-05-14 01:12:31] 2026-05-14 05:11:59,369 | INFO     | will attempt to kill all subprocesses of pid=39274
[2026-05-14 01:12:31] 2026-05-14 05:11:59,524 | INFO     | process IDs to be killed: [39274] (in reverse order)
[2026-05-14 01:12:31] 2026-05-14 05:11:59,602 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 01:12:31] 2026-05-14 05:11:59,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 01:12:31] 2026-05-14 05:11:59,610 | INFO     | did not find any defunct processes belonging to 39274
[2026-05-14 01:12:31] 2026-05-14 05:11:59,615 | INFO     | did not find any defunct processes belonging to 39274
[2026-05-14 01:12:31] 2026-05-14 05:11:59,616 | INFO     | Ready for new job
[2026-05-14 01:12:31] 2026-05-14 05:11:59,617 | INFO     | ***************************************
[2026-05-14 01:12:31] 2026-05-14 05:11:59,617 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 01:12:31] 2026-05-14 05:11:59,617 | INFO     | ***************************************
[2026-05-14 01:12:31] 2026-05-14 05:11:59,617 | INFO     | 
[2026-05-14 01:12:31] 2026-05-14 05:11:59,619 | INFO     | architecture information:
[2026-05-14 01:12:31] 2026-05-14 05:11:59,620 | INFO     | executing command: cat /etc/os-release
[2026-05-14 01:12:31] 2026-05-14 05:11:59,636 | INFO     | cat /etc/os-release:
[2026-05-14 01:12:31] NAME="CentOS Linux"
[2026-05-14 01:12:31] VERSION="7 (Core)"
[2026-05-14 01:12:31] ID="centos"
[2026-05-14 01:12:31] ID_LIKE="rhel fedora"
[2026-05-14 01:12:31] VERSION_ID="7"
[2026-05-14 01:12:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 01:12:31] ANSI_COLOR="0;31"
[2026-05-14 01:12:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 01:12:31] HOME_URL="https://www.centos.org/"
[2026-05-14 01:12:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 01:12:31] 
[2026-05-14 01:12:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 01:12:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 01:12:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 01:12:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 01:12:31] 
[2026-05-14 01:12:31] 2026-05-14 05:11:59,637 | INFO     | ***************************************
[2026-05-14 01:12:31] 2026-05-14 05:12:00,140 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-05-14 01:12:31] 2026-05-14 05:12:00,162 | INFO     | sufficient remaining disk space (106317217792 B)
[2026-05-14 01:12:31] 2026-05-14 05:12:00,162 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 01:12:31] 2026-05-14 05:12:00,163 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 01:12:31] 2026-05-14 05:12:00,163 | INFO     | update_server=False
[2026-05-14 01:12:31] 2026-05-14 05:12:00,163 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 01:12:31] 2026-05-14 05:12:00,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 01:12:31] 2026-05-14 05:12:00,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 01:12:31] 2026-05-14 05:12:00,331 | INFO     | all payload control threads have been joined
[2026-05-14 01:12:31] 2026-05-14 05:12:00,363 | INFO     | all data control threads have been joined
[2026-05-14 01:12:31] 2026-05-14 05:12:00,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 01:12:31] 2026-05-14 05:12:00,497 | INFO     | aborting loop
[2026-05-14 01:12:31] 2026-05-14 05:12:00,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 01:12:31] 2026-05-14 05:12:01,169 | INFO     | [job] retrieve thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:01,169 | INFO     | [job] queue monitor thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:01,337 | INFO     | [payload] control thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:01,357 | INFO     | all job control threads have been joined
[2026-05-14 01:12:31] 2026-05-14 05:12:01,369 | INFO     | [data] control thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:01,502 | INFO     | [job] job monitor thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:01,569 | INFO     | [job] validate thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:01,728 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:01,867 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:01,965 | INFO     | [payload] validate_post thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:02,051 | INFO     | [data] copytool_in thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:02,124 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:02,170 | INFO     | [data] copytool_out thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:02,362 | INFO     | [job] control thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:02,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:02,602 | INFO     | [payload] failed_post thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:04,728 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 01:12:31] 2026-05-14 05:12:19,360 | INFO     | [monitor] cgroup control has ended
[2026-05-14 01:12:31] 2026-05-14 05:12:21,134 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466548848448)>', '<ExcThread(monitor, started 140465764562688)>']
[2026-05-14 01:12:31] 2026-05-14 05:12:26,162 | INFO     | all workflow threads have been joined
[2026-05-14 01:12:31] 2026-05-14 05:12:26,163 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 01:12:31] 2026-05-14 05:12:26,164 | INFO     | traces error code: 0
[2026-05-14 01:12:31] 2026-05-14 05:12:26,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 01:12:31] 2026-05-14 05:12:31,355 | INFO     | PID=13445 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-14 01:12:31] 2026-05-14 05:12:31,356 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 01:12:31] 2026-05-14 05:12:31,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 01:12:31] 2026-05-14 05:12:31,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 01:12:31] 2026-05-14 05:12:31,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 01:12:31] 2026-05-14 05:12:31,357 | INFO     | [monitor] control thread has ended
[2026-05-14 01:12:31] 2026-05-14 05:12:31,452 [wrapper] ==== pilot stdout END ====
[2026-05-14 01:12:31] 2026-05-14 05:12:31,454 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 01:12:31] 2026-05-14 05:12:31,457 [wrapper] pilotpid: 13445
[2026-05-14 01:12:31] 2026-05-14 05:12:31,459 [wrapper] Pilot exit status: 0
[2026-05-14 01:12:31] 2026-05-14 05:12:31,467 [wrapper] pandaids: 7138674239
[2026-05-14 01:12:31] 2026-05-14 05:12:31,506 [wrapper] cleanup supervisor_pilot 13456 13446
[2026-05-14 01:12:31] 2026-05-14 05:12:31,508 [wrapper] Test setup, not cleaning
[2026-05-14 01:12:31] 2026-05-14 05:12:31,511 [wrapper] apfmon messages muted
[2026-05-14 01:12:31] 2026-05-14 05:12:31,513 [wrapper] ==== wrapper stdout END ====
[2026-05-14 01:12:31] 2026-05-14 05:12:31,515 [wrapper] ==== wrapper stderr END ====
[2026-05-14 01:12:31]  *** Error codes and diagnostics ***
[2026-05-14 01:12:31]     "exeErrorCode": 65,
[2026-05-14 01:12:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 01:12:31]     "pilotErrorCode": 1305,
[2026-05-14 01:12:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 01:12:31]  *** Listing of results directory ***
[2026-05-14 01:12:31] total 102816
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas    683926 May 13 21:50 pilot3.tar.gz
[2026-05-14 01:12:31] -rwx------ 1 boincer umatlas     36281 May 13 21:54 runpilot2-wrapper.sh
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas      5631 May 13 21:54 queuedata.json
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas       100 May 14 01:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 01:12:31] -rwxr-xr-x 1 boincer umatlas      7986 May 14 01:09 run_atlas
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas       105 May 14 01:09 job.xml
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas      5943 May 14 01:09 init_data.xml
[2026-05-14 01:12:31] -rw-r--r-- 2 boincer umatlas 100982957 May 14 01:09 EVNT.50238157._000496.pool.root.1
[2026-05-14 01:12:31] -rw-r--r-- 2 boincer umatlas     15667 May 14 01:09 start_atlas.sh
[2026-05-14 01:12:31] drwxrwx--x 2 boincer umatlas      4096 May 14 01:09 shared
[2026-05-14 01:12:31] -rw-r--r-- 2 boincer umatlas    697442 May 14 01:09 input.tar.gz
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas         0 May 14 01:09 boinc_lockfile
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas      2561 May 14 01:09 pandaJob.out
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas        57 May 14 01:09 setup.sh.local
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas    993365 May 14 01:09 agis_schedconf.cvmfs.json
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas   1502367 May 14 01:09 agis_ddmendpoints.agis.ALL.json
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas       438 May 14 01:09 workernode_map.json
[2026-05-14 01:12:31] drwx------ 5 boincer umatlas      4096 May 14 01:09 pilot3
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas       952 May 14 01:09 memory_monitor_summary.json
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas     19897 May 14 01:10 log.50250192._021479.job.log.tgz.1
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas      7068 May 14 01:11 heartbeat_new.json
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas      7030 May 14 01:11 heartbeat.json
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas        22 May 14 01:12 wrapper_checkpoint.txt
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas      8192 May 14 01:12 boinc_mmap_file
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas       481 May 14 01:12 boinc_task_state.xml
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas        95 May 14 01:12 pilot_heartbeat.json
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas       745 May 14 01:12 pilotlog.txt
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas     74925 May 14 01:12 log.50250192._021479.job.log.1
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas       188 May 14 01:12 output.list
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas       410 May 14 01:12 runtime_log
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas    112640 May 14 01:12 result.tar.gz
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas      8801 May 14 01:12 runtime_log.err
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas       640 May 14 01:12 2b582332d667.diag
[2026-05-14 01:12:31] -rw-r--r-- 1 boincer umatlas     21598 May 14 01:12 stderr.txt
[2026-05-14 01:12:31] No HITS result produced
[2026-05-14 01:12:31]  *** Contents of shared directory: ***
[2026-05-14 01:12:31] total 99432
[2026-05-14 01:12:31] -rw-r--r-- 2 boincer umatlas 100982957 May 14 01:09 ATLAS.root_0
[2026-05-14 01:12:31] -rw-r--r-- 2 boincer umatlas     15667 May 14 01:09 start_atlas.sh
[2026-05-14 01:12:31] -rw-r--r-- 2 boincer umatlas    697442 May 14 01:09 input.tar.gz
[2026-05-14 01:12:31] -rw------- 1 boincer umatlas    112640 May 14 01:12 result.tar.gz
01:12:33 (4497): run_atlas exited; CPU time 20.572683
01:12:33 (4497): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN