Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:38:49 (908915): wrapper (7.7.26015): starting
00:38:49 (908915): wrapper: running run_atlas (--nthreads 9)
[2026-05-14 00:38:49] Arguments: --nthreads 9
[2026-05-14 00:38:49] Threads: 9
[2026-05-14 00:38:49] Checking for CVMFS
[2026-05-14 00:38:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 00:38:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 00:38:49] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 00:38:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 00:38:50] 2.13.3.0 17228 19603 287096 159509 2 361 19759886 32935937 25997 16776704 0 90073356 99.523 111472417 32059 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-14 00:38:50] CVMFS is ok
[2026-05-14 00:38:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 00:38:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 00:38:50] Further information can be found at the LHC@home message board.
[2026-05-14 00:38:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 00:38:50] Checking for apptainer binary...
[2026-05-14 00:38:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 00:38:50] Running /usr/bin/apptainer --version
[2026-05-14 00:38:50] apptainer version 1.4.5-3.el9
[2026-05-14 00:38:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 00:38:50] c6-12-27-2.aglt2.org
[2026-05-14 00:38:50] apptainer works
[2026-05-14 00:38:50] Set ATHENA_PROC_NUMBER=9
[2026-05-14 00:38:50] Set ATHENA_CORE_NUMBER=9
[2026-05-14 00:38:50] Starting ATLAS job with PandaID=7138669603
[2026-05-14 00:38:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 00:43:19]  *** The last 200 lines of the pilot log: ***
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | WARNING  | found no stored workdir sizes
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | WARNING  | wrong length of table data, x=[1778733588.0], y=[2202.0] (must be same and length>=4)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | INFO     | could have reported an average CPU frequency of 2561 MHz (4 samples)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | INFO     | ..............................
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | INFO     | . Timing measurements:
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . get job = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . initial setup = 9 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . payload setup = 15 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . stage-in = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . payload execution = 32 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . stage-out = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . log creation = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | ..............................
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138669603/pilotlog.txt
[2026-05-14 00:43:19] 2026-05-14 04:42:16,870 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 00:43:19] - Log from pilotlog.txt -
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | INFO     | extracted standard info from prmon json
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | WARNING  | found no stored workdir sizes
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | WARNING  | wrong length of table data, x=[1778733588.0], y=[2202.0] (must be same and length>=4)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | INFO     | could have reported an average CPU frequency of 2561 MHz (4 samples)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | INFO     | ..............................
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | INFO     | . Timing measurements:
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . get job = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . initial setup = 9 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . payload setup = 15 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . stage-in = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . payload execution = 32 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . stage-out = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . log creation = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | ..............................
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138669603/pilotlog.txt
[2026-05-14 00:43:19] 2026-05-14 04:42:16,871 | WARNING  | 
[2026-05-14 00:43:19] [begin log extracts]
[2026-05-14 00:43:19] - Log from pilotlog.txt -
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | INFO     | extracted standard info from prmon json
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | WARNING  | found no stored workdir sizes
[2026-05-14 00:43:19] 2026-05-14 04:42:16,847 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | WARNING  | wrong length of table data, x=[1778733588.0], y=[2202.0] (must be same and length>=4)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | INFO     | could have reported an average CPU frequency of 2561 MHz (4 samples)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | INFO     | ..............................
[2026-05-14 00:43:19] 2026-05-14 04:42:16,848 | INFO     | . Timing measurements:
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . get job = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . initial setup = 9 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . payload setup = 15 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . stage-in = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . payload execution = 32 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . stage-out = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | . log creation = 0 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | ..............................
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:43:19] 2026-05-14 04:42:16,849 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138669603/pilotlog.txt
[2026-05-14 00:43:19] [end log extracts]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,871 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,872 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 00:43:19] 2026-05-14 04:42:16,972 | INFO     | 
[2026-05-14 00:43:19] 2026-05-14 04:42:16,973 | INFO     | job summary report
[2026-05-14 00:43:19] 2026-05-14 04:42:16,973 | INFO     | --------------------------------------------------
[2026-05-14 00:43:19] 2026-05-14 04:42:16,973 | INFO     | PanDA job id: 7138669603
[2026-05-14 00:43:19] 2026-05-14 04:42:16,973 | INFO     | task id: 50250192
[2026-05-14 00:43:19] 2026-05-14 04:42:16,973 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 04:40:08,801 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 00:43:19] 2026-05-14 04:42:16,973 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 00:43:19] 2026-05-14 04:42:16,973 | INFO     | pilot state: failed 
[2026-05-14 00:43:19] 2026-05-14 04:42:16,973 | INFO     | transexitcode: 65
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | exeerrorcode: 65
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | exitcode: 65
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | cpuconsumptiontime: 27 s
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | nevents: 0
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | neventsw: 0
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | pid: 937668
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | pgrp: 937668
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | corecount: 9
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | event service: False
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | sizes: {0: 2265881, 1: 2267455, 11: 2267483, 51: 2290909, 52: 2295204, 54: 2295232, 171: 2295526}
[2026-05-14 00:43:19] 2026-05-14 04:42:16,974 | INFO     | --------------------------------------------------
[2026-05-14 00:43:19] 2026-05-14 04:42:16,975 | INFO     | 
[2026-05-14 00:43:19] 2026-05-14 04:42:16,975 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-05-14 00:43:19] 2026-05-14 04:42:16,996 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,996 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,996 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,996 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,998 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 00:43:19] 2026-05-14 04:42:16,998 | INFO     | job 7138669603 has completed (purged errors)
[2026-05-14 00:43:19] 2026-05-14 04:42:16,998 | INFO     | overall cleanup function is called
[2026-05-14 00:43:19] 2026-05-14 04:42:18,004 | INFO     | --- collectZombieJob: --- 10, [937668]
[2026-05-14 00:43:19] 2026-05-14 04:42:18,004 | INFO     | zombie collector waiting for pid 937668
[2026-05-14 00:43:19] 2026-05-14 04:42:18,005 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 00:43:19] 2026-05-14 04:42:18,005 | INFO     | collected zombie processes
[2026-05-14 00:43:19] 2026-05-14 04:42:18,005 | INFO     | will attempt to kill all subprocesses of pid=937668
[2026-05-14 00:43:19] 2026-05-14 04:42:18,388 | INFO     | process IDs to be killed: [937668] (in reverse order)
[2026-05-14 00:43:19] 2026-05-14 04:42:18,547 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 00:43:19] 2026-05-14 04:42:18,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 00:43:19] 2026-05-14 04:42:18,571 | INFO     | did not find any defunct processes belonging to 937668
[2026-05-14 00:43:19] 2026-05-14 04:42:18,592 | INFO     | did not find any defunct processes belonging to 937668
[2026-05-14 00:43:19] 2026-05-14 04:42:18,593 | INFO     | Ready for new job
[2026-05-14 00:43:19] 2026-05-14 04:42:18,594 | INFO     | ***************************************
[2026-05-14 00:43:19] 2026-05-14 04:42:18,596 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 00:43:19] 2026-05-14 04:42:18,597 | INFO     | ***************************************
[2026-05-14 00:43:19] 2026-05-14 04:42:18,597 | INFO     | 
[2026-05-14 00:43:19] 2026-05-14 04:42:18,603 | INFO     | architecture information:
[2026-05-14 00:43:19] 2026-05-14 04:42:18,604 | INFO     | executing command: cat /etc/os-release
[2026-05-14 00:43:19] 2026-05-14 04:42:18,628 | INFO     | cat /etc/os-release:
[2026-05-14 00:43:19] NAME="CentOS Linux"
[2026-05-14 00:43:19] VERSION="7 (Core)"
[2026-05-14 00:43:19] ID="centos"
[2026-05-14 00:43:19] ID_LIKE="rhel fedora"
[2026-05-14 00:43:19] VERSION_ID="7"
[2026-05-14 00:43:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 00:43:19] ANSI_COLOR="0;31"
[2026-05-14 00:43:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 00:43:19] HOME_URL="https://www.centos.org/"
[2026-05-14 00:43:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 00:43:19] 
[2026-05-14 00:43:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 00:43:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 00:43:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 00:43:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 00:43:19] 
[2026-05-14 00:43:19] 2026-05-14 04:42:18,629 | INFO     | ***************************************
[2026-05-14 00:43:19] 2026-05-14 04:42:19,131 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-05-14 00:43:19] 2026-05-14 04:42:19,151 | INFO     | sufficient remaining disk space (96534003712 B)
[2026-05-14 00:43:19] 2026-05-14 04:42:19,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 00:43:19] 2026-05-14 04:42:19,152 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 00:43:19] 2026-05-14 04:42:19,152 | INFO     | update_server=False
[2026-05-14 00:43:19] 2026-05-14 04:42:19,152 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 00:43:19] 2026-05-14 04:42:19,152 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 00:43:19] 2026-05-14 04:42:19,369 | INFO     | all payload control threads have been joined
[2026-05-14 00:43:19] 2026-05-14 04:42:19,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 00:43:19] 2026-05-14 04:42:19,424 | INFO     | aborting loop
[2026-05-14 00:43:19] 2026-05-14 04:42:19,620 | INFO     | all data control threads have been joined
[2026-05-14 00:43:19] 2026-05-14 04:42:20,158 | INFO     | [job] retrieve thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:20,221 | INFO     | [job] validate thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:20,276 | INFO     | all job control threads have been joined
[2026-05-14 00:43:19] 2026-05-14 04:42:20,307 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:20,374 | INFO     | [payload] control thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:20,430 | INFO     | [job] job monitor thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:20,516 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:20,619 | INFO     | [payload] validate_post thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:20,629 | INFO     | [data] control thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:20,747 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:21,111 | INFO     | [data] copytool_in thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:21,126 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:21,157 | INFO     | [data] copytool_out thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:21,281 | INFO     | [job] control thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:21,503 | INFO     | [payload] failed_post thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:21,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 00:43:19] 2026-05-14 04:42:22,342 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 00:43:19] 2026-05-14 04:42:22,988 | INFO     | [job] queue monitor thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:26,349 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 00:43:19] 2026-05-14 04:42:49,768 | INFO     | PID=917157 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-14 00:43:19] 2026-05-14 04:42:49,769 | INFO     | .. there are 28 such processes running
[2026-05-14 00:43:19] 2026-05-14 04:42:49,769 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 00:43:19] 2026-05-14 04:42:49,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 00:43:19] 2026-05-14 04:42:49,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 00:43:19] 2026-05-14 04:43:13,891 | INFO     | [monitor] cgroup control has ended
[2026-05-14 00:43:19] 2026-05-14 04:43:14,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555861333824)>', '<ExcThread(monitor, started 140555413612288)>']
[2026-05-14 00:43:19] 2026-05-14 04:43:14,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 00:43:19] 2026-05-14 04:43:14,894 | INFO     | [monitor] control thread has ended
[2026-05-14 00:43:19] 2026-05-14 04:43:19,114 | INFO     | all workflow threads have been joined
[2026-05-14 00:43:19] 2026-05-14 04:43:19,114 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 00:43:19] 2026-05-14 04:43:19,115 | INFO     | traces error code: 0
[2026-05-14 00:43:19] 2026-05-14 04:43:19,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 00:43:19] 2026-05-14 04:43:19,341 [wrapper] ==== pilot stdout END ====
[2026-05-14 00:43:19] 2026-05-14 04:43:19,344 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 00:43:19] 2026-05-14 04:43:19,348 [wrapper] pilotpid: 917157
[2026-05-14 00:43:19] 2026-05-14 04:43:19,352 [wrapper] Pilot exit status: 0
[2026-05-14 00:43:19] 2026-05-14 04:43:19,363 [wrapper] pandaids: 7138669603
[2026-05-14 00:43:19] 2026-05-14 04:43:19,478 [wrapper] cleanup supervisor_pilot  917166 917158
[2026-05-14 00:43:19] 2026-05-14 04:43:19,483 [wrapper] Test setup, not cleaning
[2026-05-14 00:43:19] 2026-05-14 04:43:19,487 [wrapper] apfmon messages muted
[2026-05-14 00:43:19] 2026-05-14 04:43:19,490 [wrapper] ==== wrapper stdout END ====
[2026-05-14 00:43:19] 2026-05-14 04:43:19,494 [wrapper] ==== wrapper stderr END ====
[2026-05-14 00:43:19]  *** Error codes and diagnostics ***
[2026-05-14 00:43:19]     "exeErrorCode": 65,
[2026-05-14 00:43:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 00:43:19]     "pilotErrorCode": 1305,
[2026-05-14 00:43:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 00:43:19]  *** Listing of results directory ***
[2026-05-14 00:43:19] total 105936
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas      5631 May 13 21:50 queuedata.json
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas    683926 May 13 21:50 pilot3.tar.gz
[2026-05-14 00:43:19] -rwx------. 1 boincer umatlas     36281 May 13 21:53 runpilot2-wrapper.sh
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas       100 May 14 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 00:43:19] -rwxr-xr-x. 1 boincer umatlas      7986 May 14 00:38 run_atlas
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas       105 May 14 00:38 job.xml
[2026-05-14 00:43:19] -rw-r--r--. 2 boincer umatlas 104155926 May 14 00:38 EVNT.50238157._000427.pool.root.1
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas      6765 May 14 00:38 init_data.xml
[2026-05-14 00:43:19] -rw-r--r--. 2 boincer umatlas     15667 May 14 00:38 start_atlas.sh
[2026-05-14 00:43:19] drwxrwx--x. 2 boincer umatlas      4096 May 14 00:38 shared
[2026-05-14 00:43:19] -rw-r--r--. 2 boincer umatlas    697456 May 14 00:38 input.tar.gz
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas         0 May 14 00:38 boinc_lockfile
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas      2562 May 14 00:38 pandaJob.out
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas        57 May 14 00:38 setup.sh.local
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas    993365 May 14 00:39 agis_schedconf.cvmfs.json
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas   1502367 May 14 00:39 agis_ddmendpoints.agis.ALL.json
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas       444 May 14 00:39 workernode_map.json
[2026-05-14 00:43:19] drwx------. 5 boincer umatlas      4096 May 14 00:39 pilot3
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas       978 May 14 00:40 memory_monitor_summary.json
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas     21058 May 14 00:40 log.50250192._019877.job.log.tgz.1
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas        95 May 14 00:42 pilot_heartbeat.json
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas      7114 May 14 00:42 heartbeat_new.json
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas      7076 May 14 00:42 heartbeat.json
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas       482 May 14 00:43 boinc_task_state.xml
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas      8192 May 14 00:43 boinc_mmap_file
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas        23 May 14 00:43 wrapper_checkpoint.txt
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas      4822 May 14 00:43 pilotlog.txt
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas     81287 May 14 00:43 log.50250192._019877.job.log.1
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas       188 May 14 00:43 output.list
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas       410 May 14 00:43 runtime_log
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas    122880 May 14 00:43 result.tar.gz
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas      8821 May 14 00:43 runtime_log.err
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas       641 May 14 00:43 2b1d478e718d.diag
[2026-05-14 00:43:19] -rw-r--r--. 1 boincer umatlas     21624 May 14 00:43 stderr.txt
[2026-05-14 00:43:19] No HITS result produced
[2026-05-14 00:43:19]  *** Contents of shared directory: ***
[2026-05-14 00:43:19] total 102536
[2026-05-14 00:43:19] -rw-r--r--. 2 boincer umatlas 104155926 May 14 00:38 ATLAS.root_0
[2026-05-14 00:43:19] -rw-r--r--. 2 boincer umatlas     15667 May 14 00:38 start_atlas.sh
[2026-05-14 00:43:19] -rw-r--r--. 2 boincer umatlas    697456 May 14 00:38 input.tar.gz
[2026-05-14 00:43:19] -rw-------. 1 boincer umatlas    122880 May 14 00:43 result.tar.gz
00:43:21 (908915): run_atlas exited; CPU time 31.337585
00:43:21 (908915): called boinc_finish(0)

</stderr_txt>
]]>

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