Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:38:19 (2019027): wrapper (7.7.26015): starting
00:38:19 (2019027): wrapper: running run_atlas (--nthreads 8)
[2026-05-14 00:38:19] Arguments: --nthreads 8
[2026-05-14 00:38:19] Threads: 8
[2026-05-14 00:38:19] Checking for CVMFS
[2026-05-14 00:38:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 00:38:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 00:38:20] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 00:38:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 00:38:20] 2.13.3.0 8354 19532 178776 159509 3 508 21660854 39288833 7085 16776704 0 23937091 99.690 22712927 35591 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-14 00:38:20] CVMFS is ok
[2026-05-14 00:38:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 00:38:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 00:38:20] Further information can be found at the LHC@home message board.
[2026-05-14 00:38:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 00:38:20] Checking for apptainer binary...
[2026-05-14 00:38:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 00:38:20] Running /usr/bin/apptainer --version
[2026-05-14 00:38:20] apptainer version 1.4.5-3.el9
[2026-05-14 00:38:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 00:38:21] c-210-26.aglt2.org
[2026-05-14 00:38:21] apptainer works
[2026-05-14 00:38:21] Set ATHENA_PROC_NUMBER=8
[2026-05-14 00:38:21] Set ATHENA_CORE_NUMBER=8
[2026-05-14 00:38:21] Starting ATLAS job with PandaID=7138669423
[2026-05-14 00:38:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 00:44:35]  *** The last 200 lines of the pilot log: ***
[2026-05-14 00:44:35] 2026-05-14 04:43:51,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:44:35] 2026-05-14 04:43:51,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:44:35] 2026-05-14 04:43:51,787 | WARNING  | wrong length of table data, x=[1778733637.0, 1778733698.0], y=[2743.0, 641258.0] (must be same and length>=4)
[2026-05-14 00:44:35] 2026-05-14 04:43:51,787 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | ..............................
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . Timing measurements:
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . get job = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . initial setup = 22 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . payload setup = 43 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . stage-in = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . payload execution = 92 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . stage-out = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . log creation = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | ..............................
[2026-05-14 00:44:35] 2026-05-14 04:43:51,799 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:44:35] 2026-05-14 04:43:51,799 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7138669423/pilotlog.txt
[2026-05-14 00:44:35] 2026-05-14 04:43:51,917 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 00:44:35] - Log from pilotlog.txt -
[2026-05-14 00:44:35] 2026-05-14 04:43:51,761 | INFO     | payload/TRF did not report the number of read events
[2026-05-14 00:44:35] 2026-05-14 04:43:51,785 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7138669423/memory_monitor_summary.json (trf name=prmon)
[2026-05-14 00:44:35] 2026-05-14 04:43:51,786 | INFO     | extracted standard info from prmon json
[2026-05-14 00:44:35] 2026-05-14 04:43:51,786 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:44:35] 2026-05-14 04:43:51,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:44:35] 2026-05-14 04:43:51,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:44:35] 2026-05-14 04:43:51,787 | WARNING  | wrong length of table data, x=[1778733637.0, 1778733698.0], y=[2743.0, 641258.0] (must be same and length>=4)
[2026-05-14 00:44:35] 2026-05-14 04:43:51,787 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | ..............................
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . Timing measurements:
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . get job = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . initial setup = 22 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . payload setup = 43 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . stage-in = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . payload execution = 92 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . stage-out = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . log creation = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | ..............................
[2026-05-14 00:44:35] 2026-05-14 04:43:51,799 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:44:35] 2026-05-14 04:43:51,799 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7138669423/pilotlog.txt
[2026-05-14 00:44:35] 2026-05-14 04:43:51,918 | WARNING  | 
[2026-05-14 00:44:35] [begin log extracts]
[2026-05-14 00:44:35] - Log from pilotlog.txt -
[2026-05-14 00:44:35] 2026-05-14 04:43:51,761 | INFO     | payload/TRF did not report the number of read events
[2026-05-14 00:44:35] 2026-05-14 04:43:51,785 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7138669423/memory_monitor_summary.json (trf name=prmon)
[2026-05-14 00:44:35] 2026-05-14 04:43:51,786 | INFO     | extracted standard info from prmon json
[2026-05-14 00:44:35] 2026-05-14 04:43:51,786 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:44:35] 2026-05-14 04:43:51,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:44:35] 2026-05-14 04:43:51,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:44:35] 2026-05-14 04:43:51,787 | WARNING  | wrong length of table data, x=[1778733637.0, 1778733698.0], y=[2743.0, 641258.0] (must be same and length>=4)
[2026-05-14 00:44:35] 2026-05-14 04:43:51,787 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | ..............................
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . Timing measurements:
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . get job = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . initial setup = 22 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . payload setup = 43 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . stage-in = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . payload execution = 92 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . stage-out = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | . log creation = 0 s
[2026-05-14 00:44:35] 2026-05-14 04:43:51,788 | INFO     | ..............................
[2026-05-14 00:44:35] 2026-05-14 04:43:51,799 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:44:35] 2026-05-14 04:43:51,799 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7138669423/pilotlog.txt
[2026-05-14 00:44:35] [end log extracts]
[2026-05-14 00:44:35] 2026-05-14 04:43:51,918 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 00:44:35] 2026-05-14 04:43:51,919 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 00:44:35] 2026-05-14 04:43:52,229 | INFO     | 
[2026-05-14 00:44:35] 2026-05-14 04:43:52,229 | INFO     | job summary report
[2026-05-14 00:44:35] 2026-05-14 04:43:52,229 | INFO     | --------------------------------------------------
[2026-05-14 00:44:35] 2026-05-14 04:43:52,229 | INFO     | PanDA job id: 7138669423
[2026-05-14 00:44:35] 2026-05-14 04:43:52,229 | INFO     | task id: 50250192
[2026-05-14 00:44:35] 2026-05-14 04:43:52,229 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 04:41:41,293 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 00:44:35] 2026-05-14 04:43:52,229 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 00:44:35] 2026-05-14 04:43:52,230 | INFO     | pilot state: failed 
[2026-05-14 00:44:35] 2026-05-14 04:43:52,230 | INFO     | transexitcode: 65
[2026-05-14 00:44:35] 2026-05-14 04:43:52,230 | INFO     | exeerrorcode: 65
[2026-05-14 00:44:35] 2026-05-14 04:43:52,230 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 00:44:35] 2026-05-14 04:43:52,230 | INFO     | exitcode: 65
[2026-05-14 00:44:35] 2026-05-14 04:43:52,230 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 00:44:35] 2026-05-14 04:43:52,230 | INFO     | cpuconsumptiontime: 28 s
[2026-05-14 00:44:35] 2026-05-14 04:43:52,230 | INFO     | nevents: 0
[2026-05-14 00:44:35] 2026-05-14 04:43:52,230 | INFO     | neventsw: 0
[2026-05-14 00:44:35] 2026-05-14 04:43:52,230 | INFO     | pid: 2037645
[2026-05-14 00:44:35] 2026-05-14 04:43:52,231 | INFO     | pgrp: 2037645
[2026-05-14 00:44:35] 2026-05-14 04:43:52,231 | INFO     | corecount: 8
[2026-05-14 00:44:35] 2026-05-14 04:43:52,231 | INFO     | event service: False
[2026-05-14 00:44:35] 2026-05-14 04:43:52,231 | INFO     | sizes: {0: 2265596, 1: 2265652, 2: 2265708, 3: 2267537, 4: 2267537, 139: 2290917, 140: 2291021, 141: 2295344, 142: 2295372, 260: 2295538}
[2026-05-14 00:44:35] 2026-05-14 04:43:52,231 | INFO     | --------------------------------------------------
[2026-05-14 00:44:35] 2026-05-14 04:43:52,231 | INFO     | 
[2026-05-14 00:44:35] 2026-05-14 04:43:52,231 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-05-14 00:44:35] 2026-05-14 04:43:52,455 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,456 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,456 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,456 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,457 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,457 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,457 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,457 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,457 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,457 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,458 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,458 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,458 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,458 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 00:44:35] 2026-05-14 04:43:52,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,458 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 00:44:35] 2026-05-14 04:43:52,466 | INFO     | job 7138669423 has completed (purged errors)
[2026-05-14 00:44:35] 2026-05-14 04:43:52,466 | INFO     | overall cleanup function is called
[2026-05-14 00:44:35] 2026-05-14 04:43:53,473 | INFO     | --- collectZombieJob: --- 10, [2037645]
[2026-05-14 00:44:35] 2026-05-14 04:43:53,473 | INFO     | zombie collector waiting for pid 2037645
[2026-05-14 00:44:35] 2026-05-14 04:43:53,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 00:44:35] 2026-05-14 04:43:53,473 | INFO     | collected zombie processes
[2026-05-14 00:44:35] 2026-05-14 04:43:53,473 | INFO     | will attempt to kill all subprocesses of pid=2037645
[2026-05-14 00:44:35] 2026-05-14 04:43:53,799 | INFO     | process IDs to be killed: [2037645] (in reverse order)
[2026-05-14 00:44:35] 2026-05-14 04:43:53,923 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 00:44:35] 2026-05-14 04:43:53,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 00:44:35] 2026-05-14 04:43:53,941 | INFO     | did not find any defunct processes belonging to 2037645
[2026-05-14 00:44:35] 2026-05-14 04:43:53,969 | INFO     | did not find any defunct processes belonging to 2037645
[2026-05-14 00:44:35] 2026-05-14 04:43:53,969 | INFO     | Ready for new job
[2026-05-14 00:44:35] 2026-05-14 04:43:53,971 | INFO     | ***************************************
[2026-05-14 00:44:35] 2026-05-14 04:43:53,971 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 00:44:35] 2026-05-14 04:43:53,971 | INFO     | ***************************************
[2026-05-14 00:44:35] 2026-05-14 04:43:53,971 | INFO     | 
[2026-05-14 00:44:35] 2026-05-14 04:43:53,982 | INFO     | architecture information:
[2026-05-14 00:44:35] 2026-05-14 04:43:53,987 | INFO     | executing command: cat /etc/os-release
[2026-05-14 00:44:35] 2026-05-14 04:43:54,064 | INFO     | cat /etc/os-release:
[2026-05-14 00:44:35] NAME="CentOS Linux"
[2026-05-14 00:44:35] VERSION="7 (Core)"
[2026-05-14 00:44:35] ID="centos"
[2026-05-14 00:44:35] ID_LIKE="rhel fedora"
[2026-05-14 00:44:35] VERSION_ID="7"
[2026-05-14 00:44:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 00:44:35] ANSI_COLOR="0;31"
[2026-05-14 00:44:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 00:44:35] HOME_URL="https://www.centos.org/"
[2026-05-14 00:44:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 00:44:35] 
[2026-05-14 00:44:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 00:44:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 00:44:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 00:44:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 00:44:35] 
[2026-05-14 00:44:35] 2026-05-14 04:43:54,064 | INFO     | ***************************************
[2026-05-14 00:44:35] 2026-05-14 04:43:54,569 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-05-14 00:44:35] 2026-05-14 04:43:54,662 | INFO     | sufficient remaining disk space (53995372544 B)
[2026-05-14 00:44:35] 2026-05-14 04:43:54,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 00:44:35] 2026-05-14 04:43:54,663 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 00:44:35] 2026-05-14 04:43:54,663 | INFO     | update_server=False
[2026-05-14 00:44:35] 2026-05-14 04:43:54,663 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 00:44:35] 2026-05-14 04:43:54,774 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-14 00:44:35] 2026-05-14 04:43:54,774 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-14 00:44:35] 2026-05-14 04:43:54,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 00:44:35] 2026-05-14 04:43:54,774 | INFO     | will abort loop
[2026-05-14 00:44:35] 2026-05-14 04:43:54,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 00:44:35] 2026-05-14 04:43:55,395 | INFO     | all data control threads have been joined
[2026-05-14 00:44:35] 2026-05-14 04:43:55,451 | INFO     | all job control threads have been joined
[2026-05-14 00:44:35] 2026-05-14 04:43:55,669 | INFO     | [job] retrieve thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:55,780 | INFO     | [job] job monitor thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:55,868 | INFO     | [payload] failed_post thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:56,031 | INFO     | all payload control threads have been joined
[2026-05-14 00:44:35] 2026-05-14 04:43:56,401 | INFO     | [data] control thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:56,442 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:56,446 | INFO     | [job] validate thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:56,450 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:56,457 | INFO     | [data] copytool_in thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:56,458 | INFO     | [job] control thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:56,614 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:56,774 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:56,782 | INFO     | [payload] validate_post thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:56,785 | INFO     | [data] copytool_out thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:57,037 | INFO     | [payload] control thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:43:57,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 00:44:35] 2026-05-14 04:43:57,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 00:44:35] 2026-05-14 04:43:58,250 | INFO     | [job] queue monitor thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:44:01,483 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 00:44:35] 2026-05-14 04:44:25,560 | INFO     | PID=2025400 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 00:44:35] 2026-05-14 04:44:25,561 | INFO     | .. there are 6 such processes running
[2026-05-14 00:44:35] 2026-05-14 04:44:25,565 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 00:44:35] 2026-05-14 04:44:25,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 00:44:35] 2026-05-14 04:44:25,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 00:44:35] 2026-05-14 04:44:27,443 | INFO     | [monitor] cgroup control has ended
[2026-05-14 00:44:35] 2026-05-14 04:44:29,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139625202190144)>', '<ExcThread(monitor, started 139624680777472)>']
[2026-05-14 00:44:35] 2026-05-14 04:44:29,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 00:44:35] 2026-05-14 04:44:29,590 | INFO     | [monitor] control thread has ended
[2026-05-14 00:44:35] 2026-05-14 04:44:34,448 | INFO     | all workflow threads have been joined
[2026-05-14 00:44:35] 2026-05-14 04:44:34,448 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 00:44:35] 2026-05-14 04:44:34,448 | INFO     | traces error code: 0
[2026-05-14 00:44:35] 2026-05-14 04:44:34,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 00:44:35] 2026-05-14 04:44:34,668 [wrapper] ==== pilot stdout END ====
[2026-05-14 00:44:35] 2026-05-14 04:44:34,672 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 00:44:35] 2026-05-14 04:44:34,689 [wrapper] pilotpid: 2025400
[2026-05-14 00:44:35] 2026-05-14 04:44:34,692 [wrapper] Pilot exit status: 0
[2026-05-14 00:44:35] 2026-05-14 04:44:34,703 [wrapper] pandaids: 7138669423
[2026-05-14 00:44:35] 2026-05-14 04:44:34,763 [wrapper] cleanup supervisor_pilot 2025406 2025401
[2026-05-14 00:44:35] 2026-05-14 04:44:34,796 [wrapper] Test setup, not cleaning
[2026-05-14 00:44:35] 2026-05-14 04:44:34,833 [wrapper] apfmon messages muted
[2026-05-14 00:44:35] 2026-05-14 04:44:34,856 [wrapper] ==== wrapper stdout END ====
[2026-05-14 00:44:35] 2026-05-14 04:44:34,860 [wrapper] ==== wrapper stderr END ====
[2026-05-14 00:44:35]  *** Error codes and diagnostics ***
[2026-05-14 00:44:35]     "exeErrorCode": 65,
[2026-05-14 00:44:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 00:44:35]     "pilotErrorCode": 1305,
[2026-05-14 00:44:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 00:44:35]  *** Listing of results directory ***
[2026-05-14 00:44:35] total 104568
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas      5631 May 13 21:50 queuedata.json
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas    683926 May 13 21:50 pilot3.tar.gz
[2026-05-14 00:44:35] -rwx------. 1 boincer umatlas     36281 May 13 21:53 runpilot2-wrapper.sh
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas       100 May 14 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 00:44:35] -rwxr-xr-x. 1 boincer umatlas      7986 May 14 00:38 run_atlas
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas       105 May 14 00:38 job.xml
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas      6565 May 14 00:38 init_data.xml
[2026-05-14 00:44:35] -rw-r--r--. 2 boincer umatlas 102746814 May 14 00:38 EVNT.50238157._000407.pool.root.1
[2026-05-14 00:44:35] -rw-r--r--. 2 boincer umatlas     15667 May 14 00:38 start_atlas.sh
[2026-05-14 00:44:35] drwxrwx--x. 2 boincer umatlas      4096 May 14 00:38 shared
[2026-05-14 00:44:35] -rw-r--r--. 2 boincer umatlas    697451 May 14 00:38 input.tar.gz
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas         0 May 14 00:38 boinc_lockfile
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas      2561 May 14 00:38 pandaJob.out
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas        57 May 14 00:38 setup.sh.local
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas    993365 May 14 00:39 agis_schedconf.cvmfs.json
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas   1502367 May 14 00:39 agis_ddmendpoints.agis.ALL.json
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas       435 May 14 00:39 workernode_map.json
[2026-05-14 00:44:35] drwx------. 5 boincer umatlas      4096 May 14 00:39 pilot3
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas       482 May 14 00:41 boinc_task_state.xml
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas       993 May 14 00:41 memory_monitor_summary.json
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas     22066 May 14 00:41 log.50250192._019697.job.log.tgz.1
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas      7102 May 14 00:43 heartbeat_new.json
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas      7064 May 14 00:43 heartbeat.json
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas        95 May 14 00:44 pilot_heartbeat.json
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas        23 May 14 00:44 wrapper_checkpoint.txt
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas      8192 May 14 00:44 boinc_mmap_file
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas      5008 May 14 00:44 pilotlog.txt
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas     82560 May 14 00:44 log.50250192._019697.job.log.1
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas       188 May 14 00:44 output.list
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas       410 May 14 00:44 runtime_log
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas    122880 May 14 00:44 result.tar.gz
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas      8811 May 14 00:44 runtime_log.err
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas       639 May 14 00:44 2b1c9eea0d26.diag
[2026-05-14 00:44:35] -rw-r--r--. 1 boincer umatlas     21947 May 14 00:44 stderr.txt
[2026-05-14 00:44:35] No HITS result produced
[2026-05-14 00:44:35]  *** Contents of shared directory: ***
[2026-05-14 00:44:35] total 101164
[2026-05-14 00:44:35] -rw-r--r--. 2 boincer umatlas 102746814 May 14 00:38 ATLAS.root_0
[2026-05-14 00:44:35] -rw-r--r--. 2 boincer umatlas     15667 May 14 00:38 start_atlas.sh
[2026-05-14 00:44:35] -rw-r--r--. 2 boincer umatlas    697451 May 14 00:38 input.tar.gz
[2026-05-14 00:44:35] -rw-------. 1 boincer umatlas    122880 May 14 00:44 result.tar.gz
00:44:37 (2019027): run_atlas exited; CPU time 35.596052
00:44:37 (2019027): called boinc_finish(0)

</stderr_txt>
]]>

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