Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:38:08 (4905): wrapper (7.7.26015): starting
00:38:08 (4905): wrapper: running run_atlas (--nthreads 12)
[2026-05-14 00:38:08] Arguments: --nthreads 12
[2026-05-14 00:38:08] Threads: 12
[2026-05-14 00:38:08] Checking for CVMFS
[2026-05-14 00:38:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 00:38:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 00:38:08] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 00:38:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 00:38:08] 2.11.2.0 3035 530525 91968 159509 2 1 17076450 20275200 1 130560 3 218701286 99.952 29247625 17571 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-14 00:38:08] CVMFS is ok
[2026-05-14 00:38:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 00:38:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 00:38:08] Further information can be found at the LHC@home message board.
[2026-05-14 00:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 00:38:08] Checking for apptainer binary...
[2026-05-14 00:38:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 00:38:08] Running /usr/bin/apptainer --version
[2026-05-14 00:38:08] apptainer version 1.3.2-1.el7
[2026-05-14 00:38:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 00:38:10] c-205-31.aglt2.org
[2026-05-14 00:38:10] apptainer works
[2026-05-14 00:38:10] Set ATHENA_PROC_NUMBER=12
[2026-05-14 00:38:10] Set ATHENA_CORE_NUMBER=12
[2026-05-14 00:38:10] Starting ATLAS job with PandaID=7138669398
[2026-05-14 00:38:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 00:42:37]  *** The last 200 lines of the pilot log: ***
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | WARNING  | found no stored workdir sizes
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | WARNING  | wrong length of table data, x=[1778733544.0], y=[896.0] (must be same and length>=4)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | could have reported an average CPU frequency of 1684 MHz (4 samples)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | ..............................
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | . Timing measurements:
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | . get job = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . initial setup = 7 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . payload setup = 15 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . stage-in = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . payload execution = 35 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . stage-out = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . log creation = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | ..............................
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138669398/pilotlog.txt
[2026-05-14 00:42:37] 2026-05-14 04:41:38,800 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 00:42:37] - Log from pilotlog.txt -
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | INFO     | extracted standard info from prmon json
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | WARNING  | found no stored workdir sizes
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | WARNING  | wrong length of table data, x=[1778733544.0], y=[896.0] (must be same and length>=4)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | could have reported an average CPU frequency of 1684 MHz (4 samples)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | ..............................
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | . Timing measurements:
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | . get job = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . initial setup = 7 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . payload setup = 15 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . stage-in = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . payload execution = 35 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . stage-out = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . log creation = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | ..............................
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138669398/pilotlog.txt
[2026-05-14 00:42:37] 2026-05-14 04:41:38,801 | WARNING  | 
[2026-05-14 00:42:37] [begin log extracts]
[2026-05-14 00:42:37] - Log from pilotlog.txt -
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | INFO     | extracted standard info from prmon json
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:42:37] 2026-05-14 04:41:38,777 | WARNING  | found no stored workdir sizes
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | WARNING  | wrong length of table data, x=[1778733544.0], y=[896.0] (must be same and length>=4)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | could have reported an average CPU frequency of 1684 MHz (4 samples)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | ..............................
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | . Timing measurements:
[2026-05-14 00:42:37] 2026-05-14 04:41:38,778 | INFO     | . get job = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . initial setup = 7 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . payload setup = 15 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . stage-in = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . payload execution = 35 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . stage-out = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | . log creation = 0 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | ..............................
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:42:37] 2026-05-14 04:41:38,779 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138669398/pilotlog.txt
[2026-05-14 00:42:37] [end log extracts]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,801 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,802 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 00:42:37] 2026-05-14 04:41:38,886 | INFO     | 
[2026-05-14 00:42:37] 2026-05-14 04:41:38,886 | INFO     | job summary report
[2026-05-14 00:42:37] 2026-05-14 04:41:38,886 | INFO     | --------------------------------------------------
[2026-05-14 00:42:37] 2026-05-14 04:41:38,886 | INFO     | PanDA job id: 7138669398
[2026-05-14 00:42:37] 2026-05-14 04:41:38,887 | INFO     | task id: 50250192
[2026-05-14 00:42:37] 2026-05-14 04:41:38,887 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 04:39:30,297 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 00:42:37] 2026-05-14 04:41:38,887 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 00:42:37] 2026-05-14 04:41:38,887 | INFO     | pilot state: failed 
[2026-05-14 00:42:37] 2026-05-14 04:41:38,887 | INFO     | transexitcode: 65
[2026-05-14 00:42:37] 2026-05-14 04:41:38,887 | INFO     | exeerrorcode: 65
[2026-05-14 00:42:37] 2026-05-14 04:41:38,888 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,888 | INFO     | exitcode: 65
[2026-05-14 00:42:37] 2026-05-14 04:41:38,888 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,888 | INFO     | cpuconsumptiontime: 23 s
[2026-05-14 00:42:37] 2026-05-14 04:41:38,888 | INFO     | nevents: 0
[2026-05-14 00:42:37] 2026-05-14 04:41:38,888 | INFO     | neventsw: 0
[2026-05-14 00:42:37] 2026-05-14 04:41:38,888 | INFO     | pid: 13011
[2026-05-14 00:42:37] 2026-05-14 04:41:38,889 | INFO     | pgrp: 13011
[2026-05-14 00:42:37] 2026-05-14 04:41:38,889 | INFO     | corecount: 12
[2026-05-14 00:42:37] 2026-05-14 04:41:38,889 | INFO     | event service: False
[2026-05-14 00:42:37] 2026-05-14 04:41:38,889 | INFO     | sizes: {0: 2267455, 11: 2267455, 54: 2290892, 55: 2295187, 58: 2295215, 175: 2295381}
[2026-05-14 00:42:37] 2026-05-14 04:41:38,889 | INFO     | --------------------------------------------------
[2026-05-14 00:42:37] 2026-05-14 04:41:38,889 | INFO     | 
[2026-05-14 00:42:37] 2026-05-14 04:41:38,890 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-14 00:42:37] 2026-05-14 04:41:38,917 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,917 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,917 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,917 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,917 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,920 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,920 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 00:42:37] 2026-05-14 04:41:38,920 | INFO     | job 7138669398 has completed (purged errors)
[2026-05-14 00:42:37] 2026-05-14 04:41:38,921 | INFO     | overall cleanup function is called
[2026-05-14 00:42:37] 2026-05-14 04:41:39,927 | INFO     | --- collectZombieJob: --- 10, [13011]
[2026-05-14 00:42:37] 2026-05-14 04:41:39,927 | INFO     | zombie collector waiting for pid 13011
[2026-05-14 00:42:37] 2026-05-14 04:41:39,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 00:42:37] 2026-05-14 04:41:39,928 | INFO     | collected zombie processes
[2026-05-14 00:42:37] 2026-05-14 04:41:39,928 | INFO     | will attempt to kill all subprocesses of pid=13011
[2026-05-14 00:42:37] 2026-05-14 04:41:40,004 | INFO     | process IDs to be killed: [13011] (in reverse order)
[2026-05-14 00:42:37] 2026-05-14 04:41:40,062 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 00:42:37] 2026-05-14 04:41:40,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 00:42:37] 2026-05-14 04:41:40,066 | INFO     | did not find any defunct processes belonging to 13011
[2026-05-14 00:42:37] 2026-05-14 04:41:40,068 | INFO     | did not find any defunct processes belonging to 13011
[2026-05-14 00:42:37] 2026-05-14 04:41:40,068 | INFO     | Ready for new job
[2026-05-14 00:42:37] 2026-05-14 04:41:40,069 | INFO     | ***************************************
[2026-05-14 00:42:37] 2026-05-14 04:41:40,069 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 00:42:37] 2026-05-14 04:41:40,069 | INFO     | ***************************************
[2026-05-14 00:42:37] 2026-05-14 04:41:40,069 | INFO     | 
[2026-05-14 00:42:37] 2026-05-14 04:41:40,070 | INFO     | architecture information:
[2026-05-14 00:42:37] 2026-05-14 04:41:40,071 | INFO     | executing command: cat /etc/os-release
[2026-05-14 00:42:37] 2026-05-14 04:41:40,087 | INFO     | cat /etc/os-release:
[2026-05-14 00:42:37] NAME="CentOS Linux"
[2026-05-14 00:42:37] VERSION="7 (Core)"
[2026-05-14 00:42:37] ID="centos"
[2026-05-14 00:42:37] ID_LIKE="rhel fedora"
[2026-05-14 00:42:37] VERSION_ID="7"
[2026-05-14 00:42:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 00:42:37] ANSI_COLOR="0;31"
[2026-05-14 00:42:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 00:42:37] HOME_URL="https://www.centos.org/"
[2026-05-14 00:42:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 00:42:37] 
[2026-05-14 00:42:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 00:42:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 00:42:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 00:42:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 00:42:37] 
[2026-05-14 00:42:37] 2026-05-14 04:41:40,087 | INFO     | ***************************************
[2026-05-14 00:42:37] 2026-05-14 04:41:40,590 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-14 00:42:37] 2026-05-14 04:41:40,608 | INFO     | sufficient remaining disk space (29747052544 B)
[2026-05-14 00:42:37] 2026-05-14 04:41:40,608 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 00:42:37] 2026-05-14 04:41:40,609 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 00:42:37] 2026-05-14 04:41:40,609 | INFO     | update_server=False
[2026-05-14 00:42:37] 2026-05-14 04:41:40,609 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 00:42:37] 2026-05-14 04:41:40,609 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-14 00:42:37] 2026-05-14 04:41:40,610 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 00:42:37] 2026-05-14 04:41:40,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 00:42:37] 2026-05-14 04:41:40,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 00:42:37] 2026-05-14 04:41:40,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 00:42:37] 2026-05-14 04:41:40,611 | INFO     | aborting loop
[2026-05-14 00:42:37] 2026-05-14 04:41:40,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 00:42:37] 2026-05-14 04:41:40,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 00:42:37] 2026-05-14 04:41:40,728 | INFO     | all data control threads have been joined
[2026-05-14 00:42:37] 2026-05-14 04:41:41,454 | INFO     | all job control threads have been joined
[2026-05-14 00:42:37] 2026-05-14 04:41:41,615 | INFO     | [job] retrieve thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:41,617 | INFO     | [job] job monitor thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:41,617 | INFO     | [job] queue monitor thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:41,666 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:41,733 | INFO     | [data] control thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:41,764 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:41,781 | INFO     | all payload control threads have been joined
[2026-05-14 00:42:37] 2026-05-14 04:41:41,799 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 00:42:37] 2026-05-14 04:41:41,811 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:41,926 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:41,968 | INFO     | [payload] validate_post thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:42,072 | INFO     | [data] copytool_in thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:42,459 | INFO     | [job] control thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:42,541 | INFO     | [payload] failed_post thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:42,786 | INFO     | [payload] control thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:42,927 | INFO     | [job] validate thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:43,805 | INFO     | [data] copytool_out thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:41:44,617 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 00:42:37] 2026-05-14 04:42:32,050 | INFO     | [monitor] cgroup control has ended
[2026-05-14 00:42:37] 2026-05-14 04:42:32,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574765397824)>', '<ExcThread(monitor, started 140574170523392)>']
[2026-05-14 00:42:37] 2026-05-14 04:42:32,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 00:42:37] 2026-05-14 04:42:32,849 | INFO     | [monitor] control thread has ended
[2026-05-14 00:42:37] 2026-05-14 04:42:37,509 | INFO     | all workflow threads have been joined
[2026-05-14 00:42:37] 2026-05-14 04:42:37,509 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 00:42:37] 2026-05-14 04:42:37,510 | INFO     | traces error code: 0
[2026-05-14 00:42:37] 2026-05-14 04:42:37,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 00:42:37] 2026-05-14 04:42:37,590 [wrapper] ==== pilot stdout END ====
[2026-05-14 00:42:37] 2026-05-14 04:42:37,594 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 00:42:37] 2026-05-14 04:42:37,598 [wrapper] pilotpid: 8619
[2026-05-14 00:42:37] 2026-05-14 04:42:37,602 [wrapper] Pilot exit status: 0
[2026-05-14 00:42:37] 2026-05-14 04:42:37,617 [wrapper] pandaids: 7138669398
[2026-05-14 00:42:37] 2026-05-14 04:42:37,655 [wrapper] cleanup supervisor_pilot  8625 8620
[2026-05-14 00:42:37] 2026-05-14 04:42:37,659 [wrapper] Test setup, not cleaning
[2026-05-14 00:42:37] 2026-05-14 04:42:37,663 [wrapper] apfmon messages muted
[2026-05-14 00:42:37] 2026-05-14 04:42:37,667 [wrapper] ==== wrapper stdout END ====
[2026-05-14 00:42:37] 2026-05-14 04:42:37,671 [wrapper] ==== wrapper stderr END ====
[2026-05-14 00:42:37]  *** Error codes and diagnostics ***
[2026-05-14 00:42:37]     "exeErrorCode": 65,
[2026-05-14 00:42:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 00:42:37]     "pilotErrorCode": 1305,
[2026-05-14 00:42:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 00:42:37]  *** Listing of results directory ***
[2026-05-14 00:42:37] total 106204
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas      5631 May 13 21:50 queuedata.json
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas    683926 May 13 21:50 pilot3.tar.gz
[2026-05-14 00:42:37] -rwx------ 1 boincer umatlas     36281 May 13 21:53 runpilot2-wrapper.sh
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas       100 May 14 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 00:42:37] -rwxr-xr-x 1 boincer umatlas      7986 May 14 00:38 run_atlas
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas       105 May 14 00:38 job.xml
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas      5862 May 14 00:38 init_data.xml
[2026-05-14 00:42:37] -rw-r--r-- 2 boincer umatlas 104447264 May 14 00:38 EVNT.50238157._000404.pool.root.1
[2026-05-14 00:42:37] -rw-r--r-- 2 boincer umatlas     15667 May 14 00:38 start_atlas.sh
[2026-05-14 00:42:37] drwxrwx--x 2 boincer umatlas      4096 May 14 00:38 shared
[2026-05-14 00:42:37] -rw-r--r-- 2 boincer umatlas    697455 May 14 00:38 input.tar.gz
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas         0 May 14 00:38 boinc_lockfile
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas      2562 May 14 00:38 pandaJob.out
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas        57 May 14 00:38 setup.sh.local
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas    993365 May 14 00:38 agis_schedconf.cvmfs.json
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas   1502367 May 14 00:38 agis_ddmendpoints.agis.ALL.json
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas       434 May 14 00:38 workernode_map.json
[2026-05-14 00:42:37] drwx------ 5 boincer umatlas      4096 May 14 00:38 pilot3
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas       968 May 14 00:39 memory_monitor_summary.json
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas     21535 May 14 00:39 log.50250192._019672.job.log.tgz.1
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas       482 May 14 00:39 boinc_task_state.xml
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas        95 May 14 00:41 pilot_heartbeat.json
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas      7103 May 14 00:41 heartbeat_new.json
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas      7065 May 14 00:41 heartbeat.json
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas        23 May 14 00:42 wrapper_checkpoint.txt
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas      8192 May 14 00:42 boinc_mmap_file
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas      4551 May 14 00:42 pilotlog.txt
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas     75447 May 14 00:42 log.50250192._019672.job.log.1
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas       188 May 14 00:42 output.list
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas       410 May 14 00:42 runtime_log
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas    112640 May 14 00:42 result.tar.gz
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas      8813 May 14 00:42 runtime_log.err
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas       644 May 14 00:42 2b115db8b5ba.diag
[2026-05-14 00:42:37] -rw-r--r-- 1 boincer umatlas     21518 May 14 00:42 stderr.txt
[2026-05-14 00:42:37] No HITS result produced
[2026-05-14 00:42:37]  *** Contents of shared directory: ***
[2026-05-14 00:42:37] total 102812
[2026-05-14 00:42:37] -rw-r--r-- 2 boincer umatlas 104447264 May 14 00:38 ATLAS.root_0
[2026-05-14 00:42:37] -rw-r--r-- 2 boincer umatlas     15667 May 14 00:38 start_atlas.sh
[2026-05-14 00:42:37] -rw-r--r-- 2 boincer umatlas    697455 May 14 00:38 input.tar.gz
[2026-05-14 00:42:37] -rw------- 1 boincer umatlas    112640 May 14 00:42 result.tar.gz
00:42:38 (4905): run_atlas exited; CPU time 25.473408
00:42:38 (4905): called boinc_finish(0)

</stderr_txt>
]]>

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