Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:37:56 (2015274): wrapper (7.7.26015): starting
00:37:56 (2015274): wrapper: running run_atlas (--nthreads 8)
[2026-05-14 00:37:56] Arguments: --nthreads 8
[2026-05-14 00:37:56] Threads: 8
[2026-05-14 00:37:56] Checking for CVMFS
[2026-05-14 00:37:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 00:37:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 00:37:57] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 00:37:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 00:37:58] 2.13.3.0 8354 19531 178728 159509 3 508 21660854 39288833 7066 16776704 0 23922438 99.690 22712927 35591 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-14 00:37:58] CVMFS is ok
[2026-05-14 00:37:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 00:37:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 00:37:58] Further information can be found at the LHC@home message board.
[2026-05-14 00:37:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 00:37:58] Checking for apptainer binary...
[2026-05-14 00:37:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 00:37:58] Running /usr/bin/apptainer --version
[2026-05-14 00:37:58] apptainer version 1.4.5-3.el9
[2026-05-14 00:37:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 00:37:58] c-210-26.aglt2.org
[2026-05-14 00:37:58] apptainer works
[2026-05-14 00:37:58] Set ATHENA_PROC_NUMBER=8
[2026-05-14 00:37:58] Set ATHENA_CORE_NUMBER=8
[2026-05-14 00:37:58] Starting ATLAS job with PandaID=7138669393
[2026-05-14 00:37:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 00:44:11]  *** The last 200 lines of the pilot log: ***
[2026-05-14 00:44:11] 2026-05-14 04:43:36,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:44:11] 2026-05-14 04:43:36,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | WARNING  | wrong length of table data, x=[1778733615.0, 1778733676.0], y=[1808.0, 578269.0] (must be same and length>=4)
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | ..............................
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . Timing measurements:
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . get job = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . initial setup = 22 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . payload setup = 62 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . stage-in = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . payload execution = 92 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . stage-out = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . log creation = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | ..............................
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138669393/pilotlog.txt
[2026-05-14 00:44:11] 2026-05-14 04:43:36,414 | INFO     | monitor loop #83: job 0:7138669393 is in state 'failed'
[2026-05-14 00:44:11] 2026-05-14 04:43:36,415 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-05-14 00:44:11] 2026-05-14 04:43:36,440 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 00:44:11] - Log from pilotlog.txt -
[2026-05-14 00:44:11] 2026-05-14 04:43:36,195 | INFO     | extracted standard info from prmon json
[2026-05-14 00:44:11] 2026-05-14 04:43:36,196 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:44:11] 2026-05-14 04:43:36,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:44:11] 2026-05-14 04:43:36,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | WARNING  | wrong length of table data, x=[1778733615.0, 1778733676.0], y=[1808.0, 578269.0] (must be same and length>=4)
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | ..............................
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . Timing measurements:
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . get job = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . initial setup = 22 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . payload setup = 62 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . stage-in = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . payload execution = 92 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . stage-out = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . log creation = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | ..............................
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138669393/pilotlog.txt
[2026-05-14 00:44:11] 2026-05-14 04:43:36,414 | INFO     | monitor loop #83: job 0:7138669393 is in state 'failed'
[2026-05-14 00:44:11] 2026-05-14 04:43:36,415 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-05-14 00:44:11] 2026-05-14 04:43:36,441 | WARNING  | 
[2026-05-14 00:44:11] [begin log extracts]
[2026-05-14 00:44:11] - Log from pilotlog.txt -
[2026-05-14 00:44:11] 2026-05-14 04:43:36,195 | INFO     | extracted standard info from prmon json
[2026-05-14 00:44:11] 2026-05-14 04:43:36,196 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:44:11] 2026-05-14 04:43:36,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:44:11] 2026-05-14 04:43:36,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | WARNING  | wrong length of table data, x=[1778733615.0, 1778733676.0], y=[1808.0, 578269.0] (must be same and length>=4)
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | ..............................
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . Timing measurements:
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . get job = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . initial setup = 22 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,197 | INFO     | . payload setup = 62 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . stage-in = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . payload execution = 92 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . stage-out = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | . log creation = 0 s
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | ..............................
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:44:11] 2026-05-14 04:43:36,198 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138669393/pilotlog.txt
[2026-05-14 00:44:11] 2026-05-14 04:43:36,414 | INFO     | monitor loop #83: job 0:7138669393 is in state 'failed'
[2026-05-14 00:44:11] 2026-05-14 04:43:36,415 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-05-14 00:44:11] [end log extracts]
[2026-05-14 00:44:11] 2026-05-14 04:43:36,441 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 00:44:11] 2026-05-14 04:43:36,442 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 00:44:11] 2026-05-14 04:43:37,224 | INFO     | 
[2026-05-14 00:44:11] 2026-05-14 04:43:37,224 | INFO     | job summary report
[2026-05-14 00:44:11] 2026-05-14 04:43:37,224 | INFO     | --------------------------------------------------
[2026-05-14 00:44:11] 2026-05-14 04:43:37,224 | INFO     | PanDA job id: 7138669393
[2026-05-14 00:44:11] 2026-05-14 04:43:37,224 | INFO     | task id: 50250192
[2026-05-14 00:44:11] 2026-05-14 04:43:37,224 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 04:41:24,288 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 00:44:11] 2026-05-14 04:43:37,225 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 00:44:11] 2026-05-14 04:43:37,225 | INFO     | pilot state: failed 
[2026-05-14 00:44:11] 2026-05-14 04:43:37,225 | INFO     | transexitcode: 65
[2026-05-14 00:44:11] 2026-05-14 04:43:37,225 | INFO     | exeerrorcode: 65
[2026-05-14 00:44:11] 2026-05-14 04:43:37,225 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 00:44:11] 2026-05-14 04:43:37,225 | INFO     | exitcode: 65
[2026-05-14 00:44:11] 2026-05-14 04:43:37,225 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 00:44:11] 2026-05-14 04:43:37,225 | INFO     | cpuconsumptiontime: 28 s
[2026-05-14 00:44:11] 2026-05-14 04:43:37,225 | INFO     | nevents: 0
[2026-05-14 00:44:11] 2026-05-14 04:43:37,226 | INFO     | neventsw: 0
[2026-05-14 00:44:11] 2026-05-14 04:43:37,226 | INFO     | pid: 2032425
[2026-05-14 00:44:11] 2026-05-14 04:43:37,226 | INFO     | pgrp: 2032425
[2026-05-14 00:44:11] 2026-05-14 04:43:37,226 | INFO     | corecount: 8
[2026-05-14 00:44:11] 2026-05-14 04:43:37,226 | INFO     | event service: False
[2026-05-14 00:44:11] 2026-05-14 04:43:37,226 | INFO     | sizes: {0: 2265654, 1: 2242115, 2: 2267483, 12: 2267511, 159: 2291020, 160: 2290996, 161: 2295447, 162: 2295475, 280: 2295641}
[2026-05-14 00:44:11] 2026-05-14 04:43:37,226 | INFO     | --------------------------------------------------
[2026-05-14 00:44:11] 2026-05-14 04:43:37,226 | INFO     | 
[2026-05-14 00:44:11] 2026-05-14 04:43:37,227 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-14 00:44:11] 2026-05-14 04:43:37,542 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,543 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,543 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,543 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,544 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 00:44:11] 2026-05-14 04:43:37,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 00:44:11] 2026-05-14 04:43:37,545 | INFO     | job 7138669393 has completed (purged errors)
[2026-05-14 00:44:11] 2026-05-14 04:43:37,545 | INFO     | overall cleanup function is called
[2026-05-14 00:44:11] 2026-05-14 04:43:38,563 | INFO     | --- collectZombieJob: --- 10, [2032425]
[2026-05-14 00:44:11] 2026-05-14 04:43:38,563 | INFO     | zombie collector waiting for pid 2032425
[2026-05-14 00:44:11] 2026-05-14 04:43:38,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 00:44:11] 2026-05-14 04:43:38,563 | INFO     | collected zombie processes
[2026-05-14 00:44:11] 2026-05-14 04:43:38,563 | INFO     | will attempt to kill all subprocesses of pid=2032425
[2026-05-14 00:44:11] 2026-05-14 04:43:38,857 | INFO     | process IDs to be killed: [2032425] (in reverse order)
[2026-05-14 00:44:11] 2026-05-14 04:43:39,122 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 00:44:11] 2026-05-14 04:43:39,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 00:44:11] 2026-05-14 04:43:39,143 | INFO     | did not find any defunct processes belonging to 2032425
[2026-05-14 00:44:11] 2026-05-14 04:43:39,154 | INFO     | did not find any defunct processes belonging to 2032425
[2026-05-14 00:44:11] 2026-05-14 04:43:39,156 | INFO     | Ready for new job
[2026-05-14 00:44:11] 2026-05-14 04:43:39,157 | INFO     | ***************************************
[2026-05-14 00:44:11] 2026-05-14 04:43:39,158 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 00:44:11] 2026-05-14 04:43:39,158 | INFO     | ***************************************
[2026-05-14 00:44:11] 2026-05-14 04:43:39,158 | INFO     | 
[2026-05-14 00:44:11] 2026-05-14 04:43:39,176 | INFO     | architecture information:
[2026-05-14 00:44:11] 2026-05-14 04:43:39,180 | INFO     | executing command: cat /etc/os-release
[2026-05-14 00:44:11] 2026-05-14 04:43:39,243 | INFO     | cat /etc/os-release:
[2026-05-14 00:44:11] NAME="CentOS Linux"
[2026-05-14 00:44:11] VERSION="7 (Core)"
[2026-05-14 00:44:11] ID="centos"
[2026-05-14 00:44:11] ID_LIKE="rhel fedora"
[2026-05-14 00:44:11] VERSION_ID="7"
[2026-05-14 00:44:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 00:44:11] ANSI_COLOR="0;31"
[2026-05-14 00:44:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 00:44:11] HOME_URL="https://www.centos.org/"
[2026-05-14 00:44:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 00:44:11] 
[2026-05-14 00:44:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 00:44:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 00:44:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 00:44:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 00:44:11] 
[2026-05-14 00:44:11] 2026-05-14 04:43:39,243 | INFO     | ***************************************
[2026-05-14 00:44:11] 2026-05-14 04:43:39,749 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-14 00:44:11] 2026-05-14 04:43:39,903 | INFO     | sufficient remaining disk space (53995372544 B)
[2026-05-14 00:44:11] 2026-05-14 04:43:39,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 00:44:11] 2026-05-14 04:43:39,904 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 00:44:11] 2026-05-14 04:43:39,904 | INFO     | update_server=False
[2026-05-14 00:44:11] 2026-05-14 04:43:39,904 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 00:44:11] 2026-05-14 04:43:39,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 00:44:11] 2026-05-14 04:43:39,928 | INFO     | aborting loop
[2026-05-14 00:44:11] 2026-05-14 04:43:40,018 | INFO     | all data control threads have been joined
[2026-05-14 00:44:11] 2026-05-14 04:43:40,213 | INFO     | all payload control threads have been joined
[2026-05-14 00:44:11] 2026-05-14 04:43:40,221 | INFO     | all job control threads have been joined
[2026-05-14 00:44:11] 2026-05-14 04:43:40,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 00:44:11] 2026-05-14 04:43:40,910 | INFO     | [job] retrieve thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:40,934 | INFO     | [job] job monitor thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:40,964 | INFO     | [payload] failed_post thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:40,993 | INFO     | [data] copytool_in thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:41,024 | INFO     | [data] control thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:41,224 | INFO     | [payload] control thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:41,228 | INFO     | [job] control thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:41,294 | INFO     | [job] validate thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:41,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 00:44:11] 2026-05-14 04:43:41,735 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:41,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 00:44:11] 2026-05-14 04:43:42,020 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:42,336 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:42,393 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:42,497 | INFO     | [payload] validate_post thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:42,610 | INFO     | [data] copytool_out thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:42,940 | INFO     | [job] queue monitor thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:44,342 | INFO     | [monitor] cgroup control has ended
[2026-05-14 00:44:11] 2026-05-14 04:43:45,725 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 00:44:11] 2026-05-14 04:43:47,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140377620801344)>', '<ExcThread(monitor, started 140377273116416)>']
[2026-05-14 00:44:11] 2026-05-14 04:43:52,365 | INFO     | all workflow threads have been joined
[2026-05-14 00:44:11] 2026-05-14 04:43:52,366 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 00:44:11] 2026-05-14 04:43:52,366 | INFO     | traces error code: 0
[2026-05-14 00:44:11] 2026-05-14 04:43:52,367 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 00:44:11] 2026-05-14 04:44:10,223 | INFO     | PID=2019239 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 00:44:11] 2026-05-14 04:44:10,236 | INFO     | .. there are 7 such processes running
[2026-05-14 00:44:11] 2026-05-14 04:44:10,236 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 00:44:11] 2026-05-14 04:44:10,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 00:44:11] 2026-05-14 04:44:10,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 00:44:11] 2026-05-14 04:44:10,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 00:44:11] 2026-05-14 04:44:10,236 | INFO     | [monitor] control thread has ended
[2026-05-14 00:44:11] 2026-05-14 04:44:10,472 [wrapper] ==== pilot stdout END ====
[2026-05-14 00:44:11] 2026-05-14 04:44:10,516 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 00:44:11] 2026-05-14 04:44:10,562 [wrapper] pilotpid: 2019239
[2026-05-14 00:44:11] 2026-05-14 04:44:10,600 [wrapper] Pilot exit status: 0
[2026-05-14 00:44:11] 2026-05-14 04:44:10,804 [wrapper] pandaids: 7138669393
[2026-05-14 00:44:11] 2026-05-14 04:44:11,057 [wrapper] cleanup supervisor_pilot 2019248 2019240
[2026-05-14 00:44:11] 2026-05-14 04:44:11,101 [wrapper] Test setup, not cleaning
[2026-05-14 00:44:11] 2026-05-14 04:44:11,149 [wrapper] apfmon messages muted
[2026-05-14 00:44:11] 2026-05-14 04:44:11,205 [wrapper] ==== wrapper stdout END ====
[2026-05-14 00:44:11] 2026-05-14 04:44:11,251 [wrapper] ==== wrapper stderr END ====
[2026-05-14 00:44:11]  *** Error codes and diagnostics ***
[2026-05-14 00:44:11]     "exeErrorCode": 65,
[2026-05-14 00:44:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 00:44:11]     "pilotErrorCode": 1305,
[2026-05-14 00:44:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 00:44:11]  *** Listing of results directory ***
[2026-05-14 00:44:11] total 106224
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas      5631 May 13 21:50 queuedata.json
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas    683926 May 13 21:50 pilot3.tar.gz
[2026-05-14 00:44:11] -rwx------. 1 boincer umatlas     36281 May 13 21:53 runpilot2-wrapper.sh
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas       100 May 14 00:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 00:44:11] -rwxr-xr-x. 1 boincer umatlas      7986 May 14 00:37 run_atlas
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas       105 May 14 00:37 job.xml
[2026-05-14 00:44:11] -rw-r--r--. 2 boincer umatlas 104447264 May 14 00:37 EVNT.50238157._000404.pool.root.1
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas      6565 May 14 00:37 init_data.xml
[2026-05-14 00:44:11] -rw-r--r--. 2 boincer umatlas     15667 May 14 00:37 start_atlas.sh
[2026-05-14 00:44:11] drwxrwx--x. 2 boincer umatlas      4096 May 14 00:37 shared
[2026-05-14 00:44:11] -rw-r--r--. 2 boincer umatlas    697452 May 14 00:37 input.tar.gz
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas         0 May 14 00:37 boinc_lockfile
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas      2562 May 14 00:37 pandaJob.out
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas        57 May 14 00:37 setup.sh.local
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas    993365 May 14 00:38 agis_schedconf.cvmfs.json
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas   1502367 May 14 00:38 agis_ddmendpoints.agis.ALL.json
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas       442 May 14 00:38 workernode_map.json
[2026-05-14 00:44:11] drwx------. 5 boincer umatlas      4096 May 14 00:38 pilot3
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas       482 May 14 00:41 boinc_task_state.xml
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas      1000 May 14 00:41 memory_monitor_summary.json
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas     22284 May 14 00:41 log.50250192._019667.job.log.tgz.1
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas        95 May 14 00:43 pilot_heartbeat.json
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas      7131 May 14 00:43 heartbeat_new.json
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas      7093 May 14 00:43 heartbeat.json
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas       822 May 14 00:44 pilotlog.txt
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas      8192 May 14 00:44 boinc_mmap_file
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas        23 May 14 00:44 wrapper_checkpoint.txt
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas     85179 May 14 00:44 log.50250192._019667.job.log.1
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas       188 May 14 00:44 output.list
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas       410 May 14 00:44 runtime_log
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas    122880 May 14 00:44 result.tar.gz
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas      8811 May 14 00:44 runtime_log.err
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas       640 May 14 00:44 2b1125e15207.diag
[2026-05-14 00:44:11] -rw-r--r--. 1 boincer umatlas     21914 May 14 00:44 stderr.txt
[2026-05-14 00:44:11] No HITS result produced
[2026-05-14 00:44:11]  *** Contents of shared directory: ***
[2026-05-14 00:44:11] total 102824
[2026-05-14 00:44:11] -rw-r--r--. 2 boincer umatlas 104447264 May 14 00:37 ATLAS.root_0
[2026-05-14 00:44:11] -rw-r--r--. 2 boincer umatlas     15667 May 14 00:37 start_atlas.sh
[2026-05-14 00:44:11] -rw-r--r--. 2 boincer umatlas    697452 May 14 00:37 input.tar.gz
[2026-05-14 00:44:11] -rw-------. 1 boincer umatlas    122880 May 14 00:44 result.tar.gz
00:44:13 (2015274): run_atlas exited; CPU time 34.890540
00:44:13 (2015274): called boinc_finish(0)

</stderr_txt>
]]>

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