Stderr output

<core_client_version>8.2.12</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-14 03:28:34 (228976): vboxwrapper version 26210
2026-05-14 03:28:34 (228976): BOINC client version: 8.2.12
2026-05-14 03:28:35 (228976): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2026-05-14 03:28:35 (228976): Successfully copied 'init_data.xml' to the shared directory.
2026-05-14 03:28:35 (228976): Create VM. (boinc_045bd2a29d685aa2, slot#0)
2026-05-14 03:28:35 (228976): Setting Memory Size for VM. (4200MB)
2026-05-14 03:28:35 (228976): Setting CPU Count for VM. (2)
2026-05-14 03:28:35 (228976): Setting Chipset Options for VM.
2026-05-14 03:28:36 (228976): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-14 03:28:36 (228976): Setting Boot Options for VM.
2026-05-14 03:28:36 (228976): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-14 03:28:36 (228976): Enabling VM Network Access.
2026-05-14 03:28:36 (228976): Disabling USB Support for VM.
2026-05-14 03:28:36 (228976): Disabling COM Port Support for VM.
2026-05-14 03:28:36 (228976): Disabling LPT Port Support for VM.
2026-05-14 03:28:37 (228976): Disabling Audio Support for VM.
2026-05-14 03:28:37 (228976): Disabling Clipboard Support for VM.
2026-05-14 03:28:37 (228976): Disabling Drag and Drop Support for VM.
2026-05-14 03:28:37 (228976): Adding storage controller(s) to VM.
2026-05-14 03:28:37 (228976): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-14 03:28:38 (228976): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-14 03:28:38 (228976): forwarding host port 59943 to guest port 80
2026-05-14 03:28:38 (228976): Enabling remote desktop for VM.
2026-05-14 03:28:38 (228976): Required extension pack not installed, remote desktop not enabled.
2026-05-14 03:28:38 (228976): Enabling shared directory for VM.
2026-05-14 03:28:39 (228976): Starting VM using VBoxManage interface. (boinc_045bd2a29d685aa2, slot#0)
2026-05-14 03:28:40 (228976): Successfully started VM. (PID = '229449')
2026-05-14 03:28:40 (228976): Reporting VM Process ID to BOINC.
2026-05-14 03:28:40 (228976): Guest Log: BIOS: VirtualBox 7.0.16
2026-05-14 03:28:40 (228976): Guest Log: CPUID EDX: 0x178bfbff
2026-05-14 03:28:40 (228976): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-14 03:28:40 (228976): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-14 03:28:40 (228976): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-14 03:28:40 (228976): Detected: Web Application Enabled (http://localhost:59943)
2026-05-14 03:28:40 (228976): Preference change detected
2026-05-14 03:28:40 (228976): Setting CPU throttle for VM. (100%)
2026-05-14 03:28:40 (228976): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 240 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-14 03:28:42 (228976): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-14 03:28:42 (228976): Guest Log: BIOS: Booting from Hard Disk...
2026-05-14 03:28:45 (228976): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-14 03:28:45 (228976): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-14 03:28:45 (228976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-14 03:28:56 (228976): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-14 03:28:56 (228976): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-14 03:29:14 (228976): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-14 03:29:14 (228976): Guest Log: 00:00:00.000167 main     Log opened 2026-05-14T01:29:12.083778000Z
2026-05-14 03:29:14 (228976): Guest Log: 00:00:00.000250 main     OS Product: Linux
2026-05-14 03:29:14 (228976): Guest Log: 00:00:00.000273 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-14 03:29:14 (228976): Guest Log: 00:00:00.000290 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-14 03:29:14 (228976): Guest Log: 00:00:00.000307 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-14 03:29:14 (228976): Guest Log: 00:00:00.000308 main     Process ID: 1274
2026-05-14 03:29:14 (228976): Guest Log: 00:00:00.000309 main     Package type: LINUX_64BITS_GENERIC
2026-05-14 03:29:14 (228976): Guest Log: 00:00:00.001049 main     5.2.32 r132073 started. Verbose level = 0
2026-05-14 03:29:14 (228976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-14 03:29:14 (228976): Guest Log: [INFO] Mounting shared directory
2026-05-14 03:29:15 (228976): Guest Log: [INFO] Checking for init_data.xml
2026-05-14 03:29:18 (228976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-14 03:29:18 (228976): Guest Log: [INFO] Detected branch: prod
2026-05-14 03:29:18 (228976): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-14 03:29:18 (228976): Guest Log: Copying input files
2026-05-14 03:29:18 (228976): Guest Log: Copied input files into RunAtlas.
2026-05-14 03:29:18 (228976): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-14 03:29:18 (228976): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-14 03:29:18 (228976): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-14 03:29:18 (228976): Guest Log: Further information can be found at the LHC@home message board.
2026-05-14 03:29:26 (228976): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-14 03:29:27 (228976): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-14 03:29:27 (228976): Guest Log: 2.6.3.0 1548 0 32092 159503 4 1 3117650 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-14 03:29:30 (228976): Guest Log: copied the webapp to /var/www
2026-05-14 03:29:30 (228976): Guest Log: ATHENA_PROC_NUMBER=2
2026-05-14 03:29:30 (228976): Guest Log: ATHENA_CORE_NUMBER=2
2026-05-14 03:29:31 (228976): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-14 03:29:31 (228976): Guest Log:  *** Starting ATLAS job. (PandaID=7138119914 taskID=50250192) ***
2026-05-14 03:34:33 (228976): Guest Log:  *** Job finished ***
2026-05-14 03:34:33 (228976): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:25,970 | INFO     | PID=5926 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:25,972 | INFO     | found 0 job(s) in 20 queues
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:25,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:25,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:25,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:25,972 | INFO     | [monitor] control thread has ended
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:30,821 | INFO     | all workflow threads have been joined
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:30,822 | INFO     | end of generic workflow (traces error code: 0)
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:30,822 | INFO     | traces error code: 0
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:30,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:30,928 [wrapper] ==== pilot stdout END ====
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:30,932 [wrapper] ==== wrapper stdout RESUME ====
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:30,936 [wrapper] pilotpid: 5926
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:30,939 [wrapper] Pilot exit status: 0
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:31,014 [wrapper] pandaids: 7138119914
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:31,043 [wrapper] cleanup supervisor_pilot  5932 5927
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:31,051 [wrapper] Test setup, not cleaning
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:31,056 [wrapper] apfmon messages muted
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:31,060 [wrapper] ==== wrapper stdout END ====
2026-05-14 03:34:33 (228976): Guest Log: 2026-05-14 01:34:31,063 [wrapper] ==== wrapper stderr END ====
2026-05-14 03:34:33 (228976): Guest Log:  *** Error codes and diagnostics ***
2026-05-14 03:34:33 (228976): Guest Log:     "exeErrorCode": 65,
2026-05-14 03:34:33 (228976): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2026-05-14 03:34:33 (228976): Guest Log:     "pilotErrorCode": 1305,
2026-05-14 03:34:33 (228976): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2026-05-14 03:34:33 (228976): Guest Log:  *** Listing of results directory ***
2026-05-14 03:34:33 (228976): Guest Log: total 4144
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 atlas atlas  683926 May 13 13:23 pilot3.tar.gz
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 atlas atlas    5631 May 13 13:24 queuedata.json
2026-05-14 03:34:33 (228976): Guest Log: -rwx------. 1 atlas atlas   36281 May 13 13:24 runpilot2-wrapper.sh
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 atlas atlas    6232 May 14 01:29 init_data.xml
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 atlas atlas  697433 May 14 01:29 input.tar.gz
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 atlas atlas   15667 May 14 01:29 start_atlas.sh
2026-05-14 03:34:33 (228976): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 14 01:29 EVNT.50238157._000393.pool.root.1 -> /data/./ATLAS.root_0
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 atlas atlas    2559 May 14 01:29 pandaJob.out
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas  997597 May 14 01:30 agis_schedconf.cvmfs.json
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas 1502367 May 14 01:30 agis_ddmendpoints.agis.ALL.json
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas     426 May 14 01:30 workernode_map.json
2026-05-14 03:34:33 (228976): Guest Log: drwx------. 5 atlas atlas    4096 May 14 01:30 pilot3
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas     956 May 14 01:31 memory_monitor_summary.json
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas   20732 May 14 01:31 log.50250192._009830.job.log.tgz.1
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas    7091 May 14 01:33 heartbeat_new.json
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas    7053 May 14 01:33 heartbeat.json
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas      95 May 14 01:34 pilot_heartbeat.json
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas    4990 May 14 01:34 pilotlog.txt
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas   76708 May 14 01:34 log.50250192._009830.job.log.1
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas     188 May 14 01:34 output.list
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 atlas atlas     410 May 14 01:34 runtime_log
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas  112640 May 14 01:34 result.tar.gz
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 atlas atlas    8212 May 14 01:34 runtime_log.err
2026-05-14 03:34:33 (228976): Guest Log: -rw-------. 1 atlas atlas     640 May 14 01:34 7b9ca2c3337a.diag
2026-05-14 03:34:33 (228976): Guest Log: Looking for outputfile HITS.50250192._009830.pool.root.1
2026-05-14 03:34:33 (228976): Guest Log: No HITS file was produced
2026-05-14 03:34:33 (228976): Guest Log: Successfully finished the ATLAS job!
2026-05-14 03:34:33 (228976): Guest Log: Copying the results back to the shared directory!
2026-05-14 03:34:33 (228976): Guest Log:  *** Contents of shared directory: ***
2026-05-14 03:34:33 (228976): Guest Log: total 101332
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 root root 102920019 May 14 01:28 ATLAS.root_0
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 root root      6232 May 14 01:28 init_data.xml
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 root root    697433 May 14 01:28 input.tar.gz
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 root root    112640 May 14  2026 result.tar.gz
2026-05-14 03:34:33 (228976): Guest Log: -rw-r--r--. 1 root root     15667 May 14 01:28 start_atlas.sh
2026-05-14 03:34:33 (228976): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-14 03:34:33 (228976): VM Completion File Detected.
2026-05-14 03:34:33 (228976): Powering off VM.
2026-05-14 03:34:33 (228976): Successfully stopped VM.
2026-05-14 03:34:33 (228976): Deregistering VM. (boinc_045bd2a29d685aa2, slot#0)
2026-05-14 03:34:33 (228976): Removing network bandwidth throttle group from VM.
2026-05-14 03:34:33 (228976): Removing VM from VirtualBox.
2026-05-14 03:34:39 (228976): called boinc_finish(0)

</stderr_txt>
]]>

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