Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:34:56 (29599): wrapper (7.7.26015): starting
02:34:56 (29599): wrapper: running run_atlas (--nthreads 4)
[2026-05-14 02:34:56] Arguments: --nthreads 4
[2026-05-14 02:34:56] Threads: 4
[2026-05-14 02:34:56] Checking for CVMFS
[2026-05-14 02:35:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 02:35:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 02:35:34] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 02:35:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 02:35:35] 2.11.5.0 29822 0 25420 159503 4 1 2120685 4194304 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://131.225.189.146:3126 1
[2026-05-14 02:35:35] CVMFS is ok
[2026-05-14 02:35:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 02:35:35] Checking for apptainer binary...
[2026-05-14 02:35:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 02:35:35] Running /usr/bin/apptainer --version
[2026-05-14 02:35:35] apptainer version 1.0.3
[2026-05-14 02:35:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 02:35:35] TeeC16
[2026-05-14 02:35:35] apptainer works
[2026-05-14 02:35:35] Set ATHENA_PROC_NUMBER=4
[2026-05-14 02:35:35] Set ATHENA_CORE_NUMBER=4
[2026-05-14 02:35:35] Starting ATLAS job with PandaID=7138631865
[2026-05-14 02:35:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 02:38:59]  *** The last 200 lines of the pilot log: ***
[2026-05-14 02:38:59] 2026-05-14 01:38:44,513 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 02:38:59] 2026-05-14 01:38:44,513 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | WARNING  | found no stored workdir sizes
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | WARNING  | wrong length of table data, x=[1778722572.0], y=[1151.0] (must be same and length>=4)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | could have reported an average CPU frequency of 3292 MHz (4 samples)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | ..............................
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . Timing measurements:
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . get job = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . initial setup = 9 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . payload setup = 5 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . stage-in = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . payload execution = 35 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . stage-out = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . log creation = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | ..............................
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 02:38:59] 2026-05-14 01:38:44,517 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138631865/pilotlog.txt
[2026-05-14 02:38:59] 2026-05-14 01:38:44,527 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 02:38:59] - Log from pilotlog.txt -
[2026-05-14 02:38:59] 2026-05-14 01:38:44,513 | INFO     | extracted standard info from prmon json
[2026-05-14 02:38:59] 2026-05-14 01:38:44,513 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 02:38:59] 2026-05-14 01:38:44,513 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | WARNING  | found no stored workdir sizes
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | WARNING  | wrong length of table data, x=[1778722572.0], y=[1151.0] (must be same and length>=4)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | could have reported an average CPU frequency of 3292 MHz (4 samples)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | ..............................
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . Timing measurements:
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . get job = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . initial setup = 9 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . payload setup = 5 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . stage-in = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . payload execution = 35 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . stage-out = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . log creation = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | ..............................
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 02:38:59] 2026-05-14 01:38:44,517 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138631865/pilotlog.txt
[2026-05-14 02:38:59] 2026-05-14 01:38:44,528 | WARNING  | 
[2026-05-14 02:38:59] [begin log extracts]
[2026-05-14 02:38:59] - Log from pilotlog.txt -
[2026-05-14 02:38:59] 2026-05-14 01:38:44,513 | INFO     | extracted standard info from prmon json
[2026-05-14 02:38:59] 2026-05-14 01:38:44,513 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 02:38:59] 2026-05-14 01:38:44,513 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | WARNING  | found no stored workdir sizes
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 02:38:59] 2026-05-14 01:38:44,514 | WARNING  | wrong length of table data, x=[1778722572.0], y=[1151.0] (must be same and length>=4)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | could have reported an average CPU frequency of 3292 MHz (4 samples)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | ..............................
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . Timing measurements:
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . get job = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . initial setup = 9 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,515 | INFO     | . payload setup = 5 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . stage-in = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . payload execution = 35 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . stage-out = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | . log creation = 0 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | ..............................
[2026-05-14 02:38:59] 2026-05-14 01:38:44,516 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 02:38:59] 2026-05-14 01:38:44,517 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138631865/pilotlog.txt
[2026-05-14 02:38:59] [end log extracts]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,528 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,528 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 02:38:59] 2026-05-14 01:38:44,586 | INFO     | 
[2026-05-14 02:38:59] 2026-05-14 01:38:44,586 | INFO     | job summary report
[2026-05-14 02:38:59] 2026-05-14 01:38:44,586 | INFO     | --------------------------------------------------
[2026-05-14 02:38:59] 2026-05-14 01:38:44,587 | INFO     | PanDA job id: 7138631865
[2026-05-14 02:38:59] 2026-05-14 01:38:44,587 | INFO     | task id: 50250192
[2026-05-14 02:38:59] 2026-05-14 01:38:44,587 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 02:36:40,709 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 02:38:59] 2026-05-14 01:38:44,587 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 02:38:59] 2026-05-14 01:38:44,587 | INFO     | pilot state: failed 
[2026-05-14 02:38:59] 2026-05-14 01:38:44,587 | INFO     | transexitcode: 65
[2026-05-14 02:38:59] 2026-05-14 01:38:44,587 | INFO     | exeerrorcode: 65
[2026-05-14 02:38:59] 2026-05-14 01:38:44,587 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,588 | INFO     | exitcode: 65
[2026-05-14 02:38:59] 2026-05-14 01:38:44,588 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,588 | INFO     | cpuconsumptiontime: 14 s
[2026-05-14 02:38:59] 2026-05-14 01:38:44,588 | INFO     | nevents: 0
[2026-05-14 02:38:59] 2026-05-14 01:38:44,588 | INFO     | neventsw: 0
[2026-05-14 02:38:59] 2026-05-14 01:38:44,588 | INFO     | pid: 6228
[2026-05-14 02:38:59] 2026-05-14 01:38:44,588 | INFO     | pgrp: 6228
[2026-05-14 02:38:59] 2026-05-14 01:38:44,588 | INFO     | corecount: 4
[2026-05-14 02:38:59] 2026-05-14 01:38:44,588 | INFO     | event service: False
[2026-05-14 02:38:59] 2026-05-14 01:38:44,588 | INFO     | sizes: {0: 2267449, 11: 2267449, 44: 2290808, 45: 2295130, 160: 2295268}
[2026-05-14 02:38:59] 2026-05-14 01:38:44,589 | INFO     | --------------------------------------------------
[2026-05-14 02:38:59] 2026-05-14 01:38:44,589 | INFO     | 
[2026-05-14 02:38:59] 2026-05-14 01:38:44,589 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2026-05-14 02:38:59] 2026-05-14 01:38:44,600 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,600 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,601 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,601 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,601 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,601 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,601 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,601 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,601 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,601 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,601 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,602 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,602 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 02:38:59] 2026-05-14 01:38:44,602 | INFO     | job 7138631865 has completed (purged errors)
[2026-05-14 02:38:59] 2026-05-14 01:38:44,603 | INFO     | overall cleanup function is called
[2026-05-14 02:38:59] 2026-05-14 01:38:45,608 | INFO     | --- collectZombieJob: --- 10, [6228]
[2026-05-14 02:38:59] 2026-05-14 01:38:45,609 | INFO     | zombie collector waiting for pid 6228
[2026-05-14 02:38:59] 2026-05-14 01:38:45,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 02:38:59] 2026-05-14 01:38:45,609 | INFO     | collected zombie processes
[2026-05-14 02:38:59] 2026-05-14 01:38:45,609 | INFO     | will attempt to kill all subprocesses of pid=6228
[2026-05-14 02:38:59] 2026-05-14 01:38:45,662 | INFO     | process IDs to be killed: [6228] (in reverse order)
[2026-05-14 02:38:59] 2026-05-14 01:38:45,685 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 02:38:59] 2026-05-14 01:38:45,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 02:38:59] 2026-05-14 01:38:45,687 | INFO     | did not find any defunct processes belonging to 6228
[2026-05-14 02:38:59] 2026-05-14 01:38:45,689 | INFO     | did not find any defunct processes belonging to 6228
[2026-05-14 02:38:59] 2026-05-14 01:38:45,689 | INFO     | Ready for new job
[2026-05-14 02:38:59] 2026-05-14 01:38:45,690 | INFO     | ***************************************
[2026-05-14 02:38:59] 2026-05-14 01:38:45,690 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 02:38:59] 2026-05-14 01:38:45,690 | INFO     | ***************************************
[2026-05-14 02:38:59] 2026-05-14 01:38:45,690 | INFO     | 
[2026-05-14 02:38:59] 2026-05-14 01:38:45,707 | INFO     | architecture information:
[2026-05-14 02:38:59] 2026-05-14 01:38:45,708 | INFO     | executing command: cat /etc/os-release
[2026-05-14 02:38:59] 2026-05-14 01:38:45,718 | INFO     | cat /etc/os-release:
[2026-05-14 02:38:59] NAME="CentOS Linux"
[2026-05-14 02:38:59] VERSION="7 (Core)"
[2026-05-14 02:38:59] ID="centos"
[2026-05-14 02:38:59] ID_LIKE="rhel fedora"
[2026-05-14 02:38:59] VERSION_ID="7"
[2026-05-14 02:38:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 02:38:59] ANSI_COLOR="0;31"
[2026-05-14 02:38:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 02:38:59] HOME_URL="https://www.centos.org/"
[2026-05-14 02:38:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 02:38:59] 
[2026-05-14 02:38:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 02:38:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 02:38:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 02:38:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 02:38:59] 
[2026-05-14 02:38:59] 2026-05-14 01:38:45,718 | INFO     | ***************************************
[2026-05-14 02:38:59] 2026-05-14 01:38:46,221 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2026-05-14 02:38:59] 2026-05-14 01:38:46,231 | INFO     | sufficient remaining disk space (393455075328 B)
[2026-05-14 02:38:59] 2026-05-14 01:38:46,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 02:38:59] 2026-05-14 01:38:46,232 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 02:38:59] 2026-05-14 01:38:46,232 | INFO     | update_server=False
[2026-05-14 02:38:59] 2026-05-14 01:38:46,232 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 02:38:59] 2026-05-14 01:38:46,232 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-14 02:38:59] 2026-05-14 01:38:46,233 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 02:38:59] 2026-05-14 01:38:46,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 02:38:59] 2026-05-14 01:38:46,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 02:38:59] 2026-05-14 01:38:46,233 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 02:38:59] 2026-05-14 01:38:46,234 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 02:38:59] 2026-05-14 01:38:46,234 | INFO     | aborting loop
[2026-05-14 02:38:59] 2026-05-14 01:38:46,827 | INFO     | all job control threads have been joined
[2026-05-14 02:38:59] 2026-05-14 01:38:47,139 | INFO     | all data control threads have been joined
[2026-05-14 02:38:59] 2026-05-14 01:38:47,238 | INFO     | [job] retrieve thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:47,239 | INFO     | [job] queue monitor thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:47,240 | INFO     | [job] job monitor thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:47,291 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:47,381 | INFO     | all payload control threads have been joined
[2026-05-14 02:38:59] 2026-05-14 01:38:47,425 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:47,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 02:38:59] 2026-05-14 01:38:47,596 | INFO     | [data] copytool_in thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:47,607 | INFO     | [payload] failed_post thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:47,636 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:47,831 | INFO     | [job] control thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:47,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:48,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 02:38:59] 2026-05-14 01:38:48,144 | INFO     | [data] control thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:48,315 | INFO     | [payload] validate_post thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:48,387 | INFO     | [payload] control thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:48,596 | INFO     | [job] validate thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:49,508 | INFO     | [data] copytool_out thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:52,008 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 02:38:59] 2026-05-14 01:38:52,727 | INFO     | [monitor] cgroup control has ended
[2026-05-14 02:38:59] 2026-05-14 01:38:53,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152938886976)>', '<ExcThread(monitor, started 140152290666240)>']
[2026-05-14 02:38:59] 2026-05-14 01:38:54,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 02:38:59] 2026-05-14 01:38:54,272 | INFO     | [monitor] control thread has ended
[2026-05-14 02:38:59] 2026-05-14 01:38:58,935 | INFO     | all workflow threads have been joined
[2026-05-14 02:38:59] 2026-05-14 01:38:58,935 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 02:38:59] 2026-05-14 01:38:58,935 | INFO     | traces error code: 0
[2026-05-14 02:38:59] 2026-05-14 01:38:58,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 02:38:59] 2026-05-14 01:38:59,013 [wrapper] ==== pilot stdout END ====
[2026-05-14 02:38:59] 2026-05-14 01:38:59,015 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 02:38:59] 2026-05-14 01:38:59,016 [wrapper] pilotpid: 1550
[2026-05-14 02:38:59] 2026-05-14 01:38:59,018 [wrapper] Pilot exit status: 0
[2026-05-14 02:38:59] 2026-05-14 01:38:59,024 [wrapper] pandaids: 7138631865
[2026-05-14 02:38:59] 2026-05-14 01:38:59,039 [wrapper] cleanup supervisor_pilot  1556 1551
[2026-05-14 02:38:59] 2026-05-14 01:38:59,041 [wrapper] Test setup, not cleaning
[2026-05-14 02:38:59] 2026-05-14 01:38:59,044 [wrapper] apfmon messages muted
[2026-05-14 02:38:59] 2026-05-14 01:38:59,046 [wrapper] ==== wrapper stdout END ====
[2026-05-14 02:38:59] 2026-05-14 01:38:59,048 [wrapper] ==== wrapper stderr END ====
[2026-05-14 02:38:59]  *** Error codes and diagnostics ***
[2026-05-14 02:38:59]     "exeErrorCode": 65,
[2026-05-14 02:38:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 02:38:59]     "pilotErrorCode": 1305,
[2026-05-14 02:38:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 02:38:59]  *** Listing of results directory ***
[2026-05-14 02:38:59] total 103740
[2026-05-14 02:38:59] -rw-r--r-- 1 m m    683926 May 13 22:11 pilot3.tar.gz
[2026-05-14 02:38:59] -rwx------ 1 m m     36281 May 13 23:03 runpilot2-wrapper.sh
[2026-05-14 02:38:59] -rw-r--r-- 1 m m      5631 May 13 23:03 queuedata.json
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m       100 May 14 02:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 02:38:59] -rwxr-xr-x 1 m m      7986 May 14 02:34 run_atlas
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m       105 May 14 02:34 job.xml
[2026-05-14 02:38:59] -rw-r--r-- 2 m m     15667 May 14 02:34 start_atlas.sh
[2026-05-14 02:38:59] drwxrwx--x 2 m m      4096 May 14 02:34 shared
[2026-05-14 02:38:59] -rw-r--r-- 2 m m    697440 May 14 02:34 input.tar.gz
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m      5647 May 14 02:34 init_data.xml
[2026-05-14 02:38:59] -rw-r--r-- 2 m m 101918527 May 14 02:34 EVNT.50238157._000257.pool.root.1
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m         0 May 14 02:34 boinc_lockfile
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m      2559 May 14 02:35 pandaJob.out
[2026-05-14 02:38:59] -rw------- 1 m m    997597 May 14 02:35 agis_schedconf.cvmfs.json
[2026-05-14 02:38:59] -rw------- 1 m m   1502367 May 14 02:35 agis_ddmendpoints.agis.ALL.json
[2026-05-14 02:38:59] -rw------- 1 m m       423 May 14 02:35 workernode_map.json
[2026-05-14 02:38:59] drwx------ 5 m m      4096 May 14 02:35 pilot3
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m       481 May 14 02:36 boinc_task_state.xml
[2026-05-14 02:38:59] -rw------- 1 m m       938 May 14 02:36 memory_monitor_summary.json
[2026-05-14 02:38:59] -rw------- 1 m m     21434 May 14 02:36 log.50250192._016601.job.log.tgz.1
[2026-05-14 02:38:59] -rw------- 1 m m      6996 May 14 02:38 heartbeat_new.json
[2026-05-14 02:38:59] -rw------- 1 m m      6958 May 14 02:38 heartbeat.json
[2026-05-14 02:38:59] -rw------- 1 m m        95 May 14 02:38 pilot_heartbeat.json
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m      8192 May 14 02:38 boinc_mmap_file
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m        22 May 14 02:38 wrapper_checkpoint.txt
[2026-05-14 02:38:59] -rw------- 1 m m      4551 May 14 02:38 pilotlog.txt
[2026-05-14 02:38:59] -rw------- 1 m m     74576 May 14 02:38 log.50250192._016601.job.log.1
[2026-05-14 02:38:59] -rw------- 1 m m       188 May 14 02:38 output.list
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m       410 May 14 02:38 runtime_log
[2026-05-14 02:38:59] -rw------- 1 m m    112640 May 14 02:38 result.tar.gz
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m      8198 May 14 02:38 runtime_log.err
[2026-05-14 02:38:59] -rw------- 1 m m       628 May 14 02:38 f5346437ebfd.diag
[2026-05-14 02:38:59] -rw-rw-r-- 1 m m     21144 May 14 02:38 stderr.txt
[2026-05-14 02:38:59] No HITS result produced
[2026-05-14 02:38:59]  *** Contents of shared directory: ***
[2026-05-14 02:38:59] total 100344
[2026-05-14 02:38:59] -rw-r--r-- 2 m m     15667 May 14 02:34 start_atlas.sh
[2026-05-14 02:38:59] -rw-r--r-- 2 m m    697440 May 14 02:34 input.tar.gz
[2026-05-14 02:38:59] -rw-r--r-- 2 m m 101918527 May 14 02:34 ATLAS.root_0
[2026-05-14 02:38:59] -rw------- 1 m m    112640 May 14 02:38 result.tar.gz
02:39:00 (29599): run_atlas exited; CPU time 20.138308
02:39:00 (29599): called boinc_finish(0)

</stderr_txt>
]]>

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