Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:10:10 (3486551): wrapper (7.7.26015): starting
20:10:10 (3486551): wrapper: running run_atlas (--nthreads 9)
[2026-05-13 20:10:10] Arguments: --nthreads 9
[2026-05-13 20:10:10] Threads: 9
[2026-05-13 20:10:10] Checking for CVMFS
[2026-05-13 20:10:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 20:10:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 20:10:10] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 20:10:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 20:10:10] 2.13.3.0 9169 19259 265388 159501 2 626 38017678 39288833 11024 16776704 0 38115938 99.417 58594179 33194 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-13 20:10:10] CVMFS is ok
[2026-05-13 20:10:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 20:10:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 20:10:10] Further information can be found at the LHC@home message board.
[2026-05-13 20:10:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 20:10:10] Checking for apptainer binary...
[2026-05-13 20:10:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-13 20:10:10] Running /usr/bin/apptainer --version
[2026-05-13 20:10:11] apptainer version 1.4.5-3.el9
[2026-05-13 20:10:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 20:10:11] c-211-21.aglt2.org
[2026-05-13 20:10:11] apptainer works
[2026-05-13 20:10:11] Set ATHENA_PROC_NUMBER=9
[2026-05-13 20:10:11] Set ATHENA_CORE_NUMBER=9
[2026-05-13 20:10:11] Starting ATLAS job with PandaID=7138588683
[2026-05-13 20:10:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 20:14:53]  *** The last 200 lines of the pilot log: ***
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | WARNING  | found no stored workdir sizes
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 20:14:53] 2026-05-14 00:13:55,098 | WARNING  | wrong length of table data, x=[1778717478.0], y=[1861.0] (must be same and length>=4)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,098 | INFO     | could have reported an average CPU frequency of 2899 MHz (4 samples)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | ..............................
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . Timing measurements:
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . get job = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . initial setup = 12 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . payload setup = 19 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . stage-in = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | . payload execution = 42 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | . stage-out = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | . log creation = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | ..............................
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 20:14:53] 2026-05-14 00:13:55,101 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7138588683/pilotlog.txt
[2026-05-13 20:14:53] 2026-05-14 00:13:55,124 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 20:14:53] - Log from pilotlog.txt -
[2026-05-13 20:14:53] 2026-05-14 00:13:55,096 | INFO     | extracted standard info from prmon json
[2026-05-13 20:14:53] 2026-05-14 00:13:55,096 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | WARNING  | found no stored workdir sizes
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 20:14:53] 2026-05-14 00:13:55,098 | WARNING  | wrong length of table data, x=[1778717478.0], y=[1861.0] (must be same and length>=4)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,098 | INFO     | could have reported an average CPU frequency of 2899 MHz (4 samples)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | ..............................
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . Timing measurements:
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . get job = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . initial setup = 12 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . payload setup = 19 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . stage-in = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | . payload execution = 42 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | . stage-out = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | . log creation = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | ..............................
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 20:14:53] 2026-05-14 00:13:55,101 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7138588683/pilotlog.txt
[2026-05-13 20:14:53] 2026-05-14 00:13:55,125 | WARNING  | 
[2026-05-13 20:14:53] [begin log extracts]
[2026-05-13 20:14:53] - Log from pilotlog.txt -
[2026-05-13 20:14:53] 2026-05-14 00:13:55,096 | INFO     | extracted standard info from prmon json
[2026-05-13 20:14:53] 2026-05-14 00:13:55,096 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | WARNING  | found no stored workdir sizes
[2026-05-13 20:14:53] 2026-05-14 00:13:55,097 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 20:14:53] 2026-05-14 00:13:55,098 | WARNING  | wrong length of table data, x=[1778717478.0], y=[1861.0] (must be same and length>=4)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,098 | INFO     | could have reported an average CPU frequency of 2899 MHz (4 samples)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | ..............................
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . Timing measurements:
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . get job = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . initial setup = 12 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . payload setup = 19 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,099 | INFO     | . stage-in = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | . payload execution = 42 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | . stage-out = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | . log creation = 0 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | ..............................
[2026-05-13 20:14:53] 2026-05-14 00:13:55,100 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 20:14:53] 2026-05-14 00:13:55,101 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7138588683/pilotlog.txt
[2026-05-13 20:14:53] [end log extracts]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,125 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,126 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 20:14:53] 2026-05-14 00:13:55,793 | INFO     | 
[2026-05-13 20:14:53] 2026-05-14 00:13:55,793 | INFO     | job summary report
[2026-05-13 20:14:53] 2026-05-14 00:13:55,793 | INFO     | --------------------------------------------------
[2026-05-13 20:14:53] 2026-05-14 00:13:55,793 | INFO     | PanDA job id: 7138588683
[2026-05-13 20:14:53] 2026-05-14 00:13:55,793 | INFO     | task id: 50250192
[2026-05-13 20:14:53] 2026-05-14 00:13:55,794 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 00:11:47,556 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 20:14:53] 2026-05-14 00:13:55,794 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 20:14:53] 2026-05-14 00:13:55,794 | INFO     | pilot state: failed 
[2026-05-13 20:14:53] 2026-05-14 00:13:55,794 | INFO     | transexitcode: 65
[2026-05-13 20:14:53] 2026-05-14 00:13:55,794 | INFO     | exeerrorcode: 65
[2026-05-13 20:14:53] 2026-05-14 00:13:55,794 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,794 | INFO     | exitcode: 65
[2026-05-13 20:14:53] 2026-05-14 00:13:55,795 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,795 | INFO     | cpuconsumptiontime: 31 s
[2026-05-13 20:14:53] 2026-05-14 00:13:55,795 | INFO     | nevents: 0
[2026-05-13 20:14:53] 2026-05-14 00:13:55,795 | INFO     | neventsw: 0
[2026-05-13 20:14:53] 2026-05-14 00:13:55,795 | INFO     | pid: 3498178
[2026-05-13 20:14:53] 2026-05-14 00:13:55,795 | INFO     | pgrp: 3498178
[2026-05-13 20:14:53] 2026-05-14 00:13:55,795 | INFO     | corecount: 9
[2026-05-13 20:14:53] 2026-05-14 00:13:55,796 | INFO     | event service: False
[2026-05-13 20:14:53] 2026-05-14 00:13:55,796 | INFO     | sizes: {0: 2265644, 1: 2267473, 2: 2267501, 66: 2290865, 68: 2295188, 186: 2295326}
[2026-05-13 20:14:53] 2026-05-14 00:13:55,796 | INFO     | --------------------------------------------------
[2026-05-13 20:14:53] 2026-05-14 00:13:55,796 | INFO     | 
[2026-05-13 20:14:53] 2026-05-14 00:13:55,796 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-05-13 20:14:53] 2026-05-14 00:13:55,822 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,822 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,822 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,823 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,823 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,823 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,823 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,823 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,824 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,824 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,824 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,825 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,825 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 20:14:53] 2026-05-14 00:13:55,825 | INFO     | job 7138588683 has completed (purged errors)
[2026-05-13 20:14:53] 2026-05-14 00:13:55,826 | INFO     | overall cleanup function is called
[2026-05-13 20:14:53] 2026-05-14 00:13:56,833 | INFO     | --- collectZombieJob: --- 10, [3498178]
[2026-05-13 20:14:53] 2026-05-14 00:13:56,834 | INFO     | zombie collector waiting for pid 3498178
[2026-05-13 20:14:53] 2026-05-14 00:13:56,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 20:14:53] 2026-05-14 00:13:56,834 | INFO     | collected zombie processes
[2026-05-13 20:14:53] 2026-05-14 00:13:56,834 | INFO     | will attempt to kill all subprocesses of pid=3498178
[2026-05-13 20:14:53] 2026-05-14 00:13:57,471 | INFO     | process IDs to be killed: [3498178] (in reverse order)
[2026-05-13 20:14:53] 2026-05-14 00:13:57,599 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 20:14:53] 2026-05-14 00:13:57,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 20:14:53] 2026-05-14 00:13:57,614 | INFO     | did not find any defunct processes belonging to 3498178
[2026-05-13 20:14:53] 2026-05-14 00:13:57,630 | INFO     | did not find any defunct processes belonging to 3498178
[2026-05-13 20:14:53] 2026-05-14 00:13:57,630 | INFO     | Ready for new job
[2026-05-13 20:14:53] 2026-05-14 00:13:57,632 | INFO     | ***************************************
[2026-05-13 20:14:53] 2026-05-14 00:13:57,632 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 20:14:53] 2026-05-14 00:13:57,632 | INFO     | ***************************************
[2026-05-13 20:14:53] 2026-05-14 00:13:57,632 | INFO     | 
[2026-05-13 20:14:53] 2026-05-14 00:13:57,635 | INFO     | architecture information:
[2026-05-13 20:14:53] 2026-05-14 00:13:57,635 | INFO     | executing command: cat /etc/os-release
[2026-05-13 20:14:53] 2026-05-14 00:13:57,745 | INFO     | cat /etc/os-release:
[2026-05-13 20:14:53] NAME="CentOS Linux"
[2026-05-13 20:14:53] VERSION="7 (Core)"
[2026-05-13 20:14:53] ID="centos"
[2026-05-13 20:14:53] ID_LIKE="rhel fedora"
[2026-05-13 20:14:53] VERSION_ID="7"
[2026-05-13 20:14:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 20:14:53] ANSI_COLOR="0;31"
[2026-05-13 20:14:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 20:14:53] HOME_URL="https://www.centos.org/"
[2026-05-13 20:14:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 20:14:53] 
[2026-05-13 20:14:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 20:14:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 20:14:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 20:14:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 20:14:53] 
[2026-05-13 20:14:53] 2026-05-14 00:13:57,745 | INFO     | ***************************************
[2026-05-13 20:14:53] 2026-05-14 00:13:58,252 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-05-13 20:14:53] 2026-05-14 00:13:58,387 | INFO     | sufficient remaining disk space (53608448000 B)
[2026-05-13 20:14:53] 2026-05-14 00:13:58,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 20:14:53] 2026-05-14 00:13:58,388 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 20:14:53] 2026-05-14 00:13:58,388 | INFO     | update_server=False
[2026-05-13 20:14:53] 2026-05-14 00:13:58,388 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 20:14:53] 2026-05-14 00:13:58,481 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 20:14:53] 2026-05-14 00:13:58,486 | INFO     | all data control threads have been joined
[2026-05-13 20:14:53] 2026-05-14 00:13:58,547 | INFO     | all payload control threads have been joined
[2026-05-13 20:14:53] 2026-05-14 00:13:59,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 20:14:53] 2026-05-14 00:13:59,306 | INFO     | aborting loop
[2026-05-13 20:14:53] 2026-05-14 00:13:59,394 | INFO     | [job] retrieve thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:13:59,405 | INFO     | [payload] validate_post thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:13:59,431 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:13:59,487 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:13:59,492 | INFO     | [data] control thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:13:59,555 | INFO     | [payload] control thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:13:59,974 | INFO     | [data] copytool_in thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:14:00,004 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:14:00,105 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:14:00,114 | INFO     | all job control threads have been joined
[2026-05-13 20:14:53] 2026-05-14 00:14:00,311 | INFO     | [job] job monitor thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:14:00,418 | INFO     | [job] validate thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:14:00,489 | INFO     | [data] copytool_out thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:14:00,665 | INFO     | [payload] failed_post thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:14:00,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 20:14:53] 2026-05-14 00:14:01,120 | INFO     | [job] control thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:14:01,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 20:14:53] 2026-05-14 00:14:01,813 | INFO     | [job] queue monitor thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:14:05,338 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 20:14:53] 2026-05-14 00:14:27,756 | INFO     | PID=3492727 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-13 20:14:53] 2026-05-14 00:14:27,757 | INFO     | .. there are 12 such processes running
[2026-05-13 20:14:53] 2026-05-14 00:14:27,757 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 20:14:53] 2026-05-14 00:14:27,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 20:14:53] 2026-05-14 00:14:27,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 20:14:53] 2026-05-14 00:14:47,161 | INFO     | [monitor] cgroup control has ended
[2026-05-13 20:14:53] 2026-05-14 00:14:47,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140534054676288)>', '<ExcThread(monitor, started 140533712271104)>']
[2026-05-13 20:14:53] 2026-05-14 00:14:47,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 20:14:53] 2026-05-14 00:14:47,885 | INFO     | [monitor] control thread has ended
[2026-05-13 20:14:53] 2026-05-14 00:14:52,359 | INFO     | all workflow threads have been joined
[2026-05-13 20:14:53] 2026-05-14 00:14:52,360 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 20:14:53] 2026-05-14 00:14:52,361 | INFO     | traces error code: 0
[2026-05-13 20:14:53] 2026-05-14 00:14:52,361 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 20:14:53] 2026-05-14 00:14:52,735 [wrapper] ==== pilot stdout END ====
[2026-05-13 20:14:53] 2026-05-14 00:14:52,761 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 20:14:53] 2026-05-14 00:14:52,764 [wrapper] pilotpid: 3492727
[2026-05-13 20:14:53] 2026-05-14 00:14:52,767 [wrapper] Pilot exit status: 0
[2026-05-13 20:14:53] 2026-05-14 00:14:52,783 [wrapper] pandaids: 7138588683
[2026-05-13 20:14:53] 2026-05-14 00:14:52,856 [wrapper] cleanup supervisor_pilot 3492733 3492728
[2026-05-13 20:14:53] 2026-05-14 00:14:52,859 [wrapper] Test setup, not cleaning
[2026-05-13 20:14:53] 2026-05-14 00:14:52,863 [wrapper] apfmon messages muted
[2026-05-13 20:14:53] 2026-05-14 00:14:52,866 [wrapper] ==== wrapper stdout END ====
[2026-05-13 20:14:53] 2026-05-14 00:14:52,870 [wrapper] ==== wrapper stderr END ====
[2026-05-13 20:14:53]  *** Error codes and diagnostics ***
[2026-05-13 20:14:53]     "exeErrorCode": 65,
[2026-05-13 20:14:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 20:14:53]     "pilotErrorCode": 1305,
[2026-05-13 20:14:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 20:14:53]  *** Listing of results directory ***
[2026-05-13 20:14:53] total 106384
[2026-05-13 20:14:53] -rwx------. 1 boincer umatlas     36281 May 13 17:11 runpilot2-wrapper.sh
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas      5631 May 13 17:11 queuedata.json
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas    683926 May 13 17:11 pilot3.tar.gz
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas       100 May 13 20:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 20:14:53] -rwxr-xr-x. 1 boincer umatlas      7986 May 13 20:10 run_atlas
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas       105 May 13 20:10 job.xml
[2026-05-13 20:14:53] -rw-r--r--. 2 boincer umatlas 104604704 May 13 20:10 EVNT.50238157._000173.pool.root.1
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas      6431 May 13 20:10 init_data.xml
[2026-05-13 20:14:53] -rw-r--r--. 2 boincer umatlas     15667 May 13 20:10 start_atlas.sh
[2026-05-13 20:14:53] drwxrwx--x. 2 boincer umatlas      4096 May 13 20:10 shared
[2026-05-13 20:14:53] -rw-r--r--. 2 boincer umatlas    697435 May 13 20:10 input.tar.gz
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas         0 May 13 20:10 boinc_lockfile
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas      2557 May 13 20:10 pandaJob.out
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas        57 May 13 20:10 setup.sh.local
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas    997597 May 13 20:10 agis_schedconf.cvmfs.json
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas   1502367 May 13 20:10 agis_ddmendpoints.agis.ALL.json
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas       442 May 13 20:10 workernode_map.json
[2026-05-13 20:14:53] drwx------. 5 boincer umatlas      4096 May 13 20:10 pilot3
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas       481 May 13 20:11 boinc_task_state.xml
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas       971 May 13 20:11 memory_monitor_summary.json
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas     20826 May 13 20:11 log.50250192._014842.job.log.tgz.1
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas        95 May 13 20:13 pilot_heartbeat.json
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas      7082 May 13 20:13 heartbeat_new.json
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas      7044 May 13 20:13 heartbeat.json
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas      8192 May 13 20:14 boinc_mmap_file
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas      4823 May 13 20:14 pilotlog.txt
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas        23 May 13 20:14 wrapper_checkpoint.txt
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas     82298 May 13 20:14 log.50250192._014842.job.log.1
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas       188 May 13 20:14 output.list
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas       410 May 13 20:14 runtime_log
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas    122880 May 13 20:14 result.tar.gz
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas      8811 May 13 20:14 runtime_log.err
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas       638 May 13 20:14 e91ae9508570.diag
[2026-05-13 20:14:53] -rw-r--r--. 1 boincer umatlas     21621 May 13 20:14 stderr.txt
[2026-05-13 20:14:53] No HITS result produced
[2026-05-13 20:14:53]  *** Contents of shared directory: ***
[2026-05-13 20:14:53] total 102976
[2026-05-13 20:14:53] -rw-r--r--. 2 boincer umatlas 104604704 May 13 20:10 ATLAS.root_0
[2026-05-13 20:14:53] -rw-r--r--. 2 boincer umatlas     15667 May 13 20:10 start_atlas.sh
[2026-05-13 20:14:53] -rw-r--r--. 2 boincer umatlas    697435 May 13 20:10 input.tar.gz
[2026-05-13 20:14:53] -rw-------. 1 boincer umatlas    122880 May 13 20:14 result.tar.gz
20:14:54 (3486551): run_atlas exited; CPU time 35.471858
20:14:54 (3486551): called boinc_finish(0)

</stderr_txt>
]]>

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