Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:47:34 (436702): wrapper (7.7.26015): starting
18:47:34 (436702): wrapper: running run_atlas (--nthreads 8)
[2026-05-13 18:47:34] Arguments: --nthreads 8
[2026-05-13 18:47:34] Threads: 8
[2026-05-13 18:47:34] Checking for CVMFS
[2026-05-13 18:47:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 18:47:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 18:47:35] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 18:47:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 18:47:36] 2.13.3.0 5462 19181 166932 159501 2 481 25127030 39288833 7211 16776704 0 16955218 99.655 17058063 41209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-13 18:47:36] CVMFS is ok
[2026-05-13 18:47:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 18:47:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 18:47:36] Further information can be found at the LHC@home message board.
[2026-05-13 18:47:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 18:47:36] Checking for apptainer binary...
[2026-05-13 18:47:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-13 18:47:36] Running /usr/bin/apptainer --version
[2026-05-13 18:47:36] apptainer version 1.4.5-3.el9
[2026-05-13 18:47:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 18:47:37] c-210-13.aglt2.org
[2026-05-13 18:47:37] apptainer works
[2026-05-13 18:47:37] Set ATHENA_PROC_NUMBER=8
[2026-05-13 18:47:37] Set ATHENA_CORE_NUMBER=8
[2026-05-13 18:47:37] Starting ATLAS job with PandaID=7138587381
[2026-05-13 18:47:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 18:54:10]  *** The last 200 lines of the pilot log: ***
[2026-05-13 18:54:10] 2026-05-13 22:53:19,318 | INFO     | extracted standard info from prmon json
[2026-05-13 18:54:10] 2026-05-13 22:53:19,318 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 18:54:10] 2026-05-13 22:53:19,319 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 18:54:10] 2026-05-13 22:53:19,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 18:54:10] 2026-05-13 22:53:19,380 | WARNING  | wrong length of table data, x=[1778712612.0, 1778712673.0], y=[825.0, 262914.0] (must be same and length>=4)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | could have reported an average CPU frequency of 2600 MHz (4 samples)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | ..............................
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . Timing measurements:
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . get job = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . initial setup = 26 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . payload setup = 43 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . stage-in = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | . payload execution = 74 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | . stage-out = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | . log creation = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | ..............................
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138587381/pilotlog.txt
[2026-05-13 18:54:10] 2026-05-13 22:53:19,445 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 18:54:10] - Log from pilotlog.txt -
[2026-05-13 18:54:10] 2026-05-13 22:53:19,196 | INFO     | payload/TRF did not report the number of read events
[2026-05-13 18:54:10] 2026-05-13 22:53:19,317 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7138587381/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,318 | INFO     | extracted standard info from prmon json
[2026-05-13 18:54:10] 2026-05-13 22:53:19,318 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 18:54:10] 2026-05-13 22:53:19,319 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 18:54:10] 2026-05-13 22:53:19,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 18:54:10] 2026-05-13 22:53:19,380 | WARNING  | wrong length of table data, x=[1778712612.0, 1778712673.0], y=[825.0, 262914.0] (must be same and length>=4)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | could have reported an average CPU frequency of 2600 MHz (4 samples)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | ..............................
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . Timing measurements:
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . get job = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . initial setup = 26 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . payload setup = 43 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . stage-in = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | . payload execution = 74 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | . stage-out = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | . log creation = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | ..............................
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138587381/pilotlog.txt
[2026-05-13 18:54:10] 2026-05-13 22:53:19,446 | WARNING  | 
[2026-05-13 18:54:10] [begin log extracts]
[2026-05-13 18:54:10] - Log from pilotlog.txt -
[2026-05-13 18:54:10] 2026-05-13 22:53:19,196 | INFO     | payload/TRF did not report the number of read events
[2026-05-13 18:54:10] 2026-05-13 22:53:19,317 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7138587381/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,318 | INFO     | extracted standard info from prmon json
[2026-05-13 18:54:10] 2026-05-13 22:53:19,318 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 18:54:10] 2026-05-13 22:53:19,319 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 18:54:10] 2026-05-13 22:53:19,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 18:54:10] 2026-05-13 22:53:19,380 | WARNING  | wrong length of table data, x=[1778712612.0, 1778712673.0], y=[825.0, 262914.0] (must be same and length>=4)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | could have reported an average CPU frequency of 2600 MHz (4 samples)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | ..............................
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . Timing measurements:
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . get job = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . initial setup = 26 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . payload setup = 43 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,381 | INFO     | . stage-in = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | . payload execution = 74 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | . stage-out = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | . log creation = 0 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | ..............................
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 18:54:10] 2026-05-13 22:53:19,382 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138587381/pilotlog.txt
[2026-05-13 18:54:10] [end log extracts]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,446 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,447 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 18:54:10] 2026-05-13 22:53:19,664 | INFO     | 
[2026-05-13 18:54:10] 2026-05-13 22:53:19,664 | INFO     | job summary report
[2026-05-13 18:54:10] 2026-05-13 22:53:19,665 | INFO     | --------------------------------------------------
[2026-05-13 18:54:10] 2026-05-13 22:53:19,665 | INFO     | PanDA job id: 7138587381
[2026-05-13 18:54:10] 2026-05-13 22:53:19,665 | INFO     | task id: 50250192
[2026-05-13 18:54:10] 2026-05-13 22:53:19,665 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-13 22:51:08,523 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 18:54:10] 2026-05-13 22:53:19,665 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 18:54:10] 2026-05-13 22:53:19,665 | INFO     | pilot state: failed 
[2026-05-13 18:54:10] 2026-05-13 22:53:19,665 | INFO     | transexitcode: 65
[2026-05-13 18:54:10] 2026-05-13 22:53:19,665 | INFO     | exeerrorcode: 65
[2026-05-13 18:54:10] 2026-05-13 22:53:19,665 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,665 | INFO     | exitcode: 65
[2026-05-13 18:54:10] 2026-05-13 22:53:19,666 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,666 | INFO     | cpuconsumptiontime: 25 s
[2026-05-13 18:54:10] 2026-05-13 22:53:19,666 | INFO     | nevents: 0
[2026-05-13 18:54:10] 2026-05-13 22:53:19,666 | INFO     | neventsw: 0
[2026-05-13 18:54:10] 2026-05-13 22:53:19,666 | INFO     | pid: 445949
[2026-05-13 18:54:10] 2026-05-13 22:53:19,666 | INFO     | pgrp: 445949
[2026-05-13 18:54:10] 2026-05-13 22:53:19,666 | INFO     | corecount: 8
[2026-05-13 18:54:10] 2026-05-13 22:53:19,666 | INFO     | event service: False
[2026-05-13 18:54:10] 2026-05-13 22:53:19,666 | INFO     | sizes: {0: 2265649, 1: 2267478, 12: 2267478, 124: 2290900, 125: 2290876, 126: 2295355, 244: 2295493}
[2026-05-13 18:54:10] 2026-05-13 22:53:19,666 | INFO     | --------------------------------------------------
[2026-05-13 18:54:10] 2026-05-13 22:53:19,667 | INFO     | 
[2026-05-13 18:54:10] 2026-05-13 22:53:19,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-13 18:54:10] 2026-05-13 22:53:19,772 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,773 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,773 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,773 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,775 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,775 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 18:54:10] 2026-05-13 22:53:19,775 | INFO     | job 7138587381 has completed (purged errors)
[2026-05-13 18:54:10] 2026-05-13 22:53:19,775 | INFO     | overall cleanup function is called
[2026-05-13 18:54:10] 2026-05-13 22:53:20,787 | INFO     | --- collectZombieJob: --- 10, [445949]
[2026-05-13 18:54:10] 2026-05-13 22:53:20,787 | INFO     | zombie collector waiting for pid 445949
[2026-05-13 18:54:10] 2026-05-13 22:53:20,787 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 18:54:10] 2026-05-13 22:53:20,788 | INFO     | collected zombie processes
[2026-05-13 18:54:10] 2026-05-13 22:53:20,788 | INFO     | will attempt to kill all subprocesses of pid=445949
[2026-05-13 18:54:10] 2026-05-13 22:53:21,109 | INFO     | process IDs to be killed: [445949] (in reverse order)
[2026-05-13 18:54:10] 2026-05-13 22:53:21,317 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 18:54:10] 2026-05-13 22:53:21,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 18:54:10] 2026-05-13 22:53:21,333 | INFO     | did not find any defunct processes belonging to 445949
[2026-05-13 18:54:10] 2026-05-13 22:53:21,349 | INFO     | did not find any defunct processes belonging to 445949
[2026-05-13 18:54:10] 2026-05-13 22:53:21,350 | INFO     | Ready for new job
[2026-05-13 18:54:10] 2026-05-13 22:53:21,351 | INFO     | ***************************************
[2026-05-13 18:54:10] 2026-05-13 22:53:21,352 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 18:54:10] 2026-05-13 22:53:21,352 | INFO     | ***************************************
[2026-05-13 18:54:10] 2026-05-13 22:53:21,352 | INFO     | 
[2026-05-13 18:54:10] 2026-05-13 22:53:21,358 | INFO     | architecture information:
[2026-05-13 18:54:10] 2026-05-13 22:53:21,362 | INFO     | executing command: cat /etc/os-release
[2026-05-13 18:54:10] 2026-05-13 22:53:21,493 | INFO     | cat /etc/os-release:
[2026-05-13 18:54:10] NAME="CentOS Linux"
[2026-05-13 18:54:10] VERSION="7 (Core)"
[2026-05-13 18:54:10] ID="centos"
[2026-05-13 18:54:10] ID_LIKE="rhel fedora"
[2026-05-13 18:54:10] VERSION_ID="7"
[2026-05-13 18:54:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 18:54:10] ANSI_COLOR="0;31"
[2026-05-13 18:54:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 18:54:10] HOME_URL="https://www.centos.org/"
[2026-05-13 18:54:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 18:54:10] 
[2026-05-13 18:54:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 18:54:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 18:54:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 18:54:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 18:54:10] 
[2026-05-13 18:54:10] 2026-05-13 22:53:21,493 | INFO     | ***************************************
[2026-05-13 18:54:10] 2026-05-13 22:53:21,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-13 18:54:10] 2026-05-13 22:53:22,195 | INFO     | sufficient remaining disk space (52203356160 B)
[2026-05-13 18:54:10] 2026-05-13 22:53:22,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 18:54:10] 2026-05-13 22:53:22,195 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 18:54:10] 2026-05-13 22:53:22,196 | INFO     | update_server=False
[2026-05-13 18:54:10] 2026-05-13 22:53:22,196 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 18:54:10] 2026-05-13 22:53:22,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 18:54:10] 2026-05-13 22:53:22,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 18:54:10] 2026-05-13 22:53:22,196 | INFO     | aborting loop
[2026-05-13 18:54:10] 2026-05-13 22:53:23,076 | INFO     | all job control threads have been joined
[2026-05-13 18:54:10] 2026-05-13 22:53:23,076 | INFO     | all payload control threads have been joined
[2026-05-13 18:54:10] 2026-05-13 22:53:23,201 | INFO     | [job] retrieve thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:23,202 | INFO     | [job] job monitor thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:23,300 | INFO     | all data control threads have been joined
[2026-05-13 18:54:10] 2026-05-13 22:53:23,467 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:23,478 | INFO     | [payload] failed_post thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:23,810 | INFO     | [job] validate thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:23,855 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:24,075 | INFO     | [data] copytool_in thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:24,082 | INFO     | [job] control thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:24,083 | INFO     | [payload] control thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:24,083 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:24,203 | INFO     | [data] copytool_out thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:24,290 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:24,305 | INFO     | [data] control thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:24,319 | INFO     | [payload] validate_post thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:24,676 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 18:54:10] 2026-05-13 22:53:24,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 18:54:10] 2026-05-13 22:53:25,687 | INFO     | [job] queue monitor thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:28,688 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 18:54:10] 2026-05-13 22:53:51,732 | INFO     | PID=441010 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-13 18:54:10] 2026-05-13 22:53:51,733 | INFO     | .. there are 6 such processes running
[2026-05-13 18:54:10] 2026-05-13 22:53:51,734 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 18:54:10] 2026-05-13 22:53:51,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 18:54:10] 2026-05-13 22:53:51,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 18:54:10] 2026-05-13 22:54:03,051 | INFO     | [monitor] cgroup control has ended
[2026-05-13 18:54:10] 2026-05-13 22:54:04,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140416194987840)>', '<ExcThread(monitor, started 140415768459008)>']
[2026-05-13 18:54:10] 2026-05-13 22:54:04,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 18:54:10] 2026-05-13 22:54:04,811 | INFO     | [monitor] control thread has ended
[2026-05-13 18:54:10] 2026-05-13 22:54:09,273 | INFO     | all workflow threads have been joined
[2026-05-13 18:54:10] 2026-05-13 22:54:09,273 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 18:54:10] 2026-05-13 22:54:09,274 | INFO     | traces error code: 0
[2026-05-13 18:54:10] 2026-05-13 22:54:09,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 18:54:10] 2026-05-13 22:54:09,814 [wrapper] ==== pilot stdout END ====
[2026-05-13 18:54:10] 2026-05-13 22:54:09,865 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 18:54:10] 2026-05-13 22:54:09,885 [wrapper] pilotpid: 441010
[2026-05-13 18:54:10] 2026-05-13 22:54:09,894 [wrapper] Pilot exit status: 0
[2026-05-13 18:54:10] 2026-05-13 22:54:09,923 [wrapper] pandaids: 7138587381
[2026-05-13 18:54:10] 2026-05-13 22:54:10,042 [wrapper] cleanup supervisor_pilot  441016 441011
[2026-05-13 18:54:10] 2026-05-13 22:54:10,056 [wrapper] Test setup, not cleaning
[2026-05-13 18:54:10] 2026-05-13 22:54:10,113 [wrapper] apfmon messages muted
[2026-05-13 18:54:10] 2026-05-13 22:54:10,223 [wrapper] ==== wrapper stdout END ====
[2026-05-13 18:54:10] 2026-05-13 22:54:10,244 [wrapper] ==== wrapper stderr END ====
[2026-05-13 18:54:10]  *** Error codes and diagnostics ***
[2026-05-13 18:54:10]     "exeErrorCode": 65,
[2026-05-13 18:54:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 18:54:10]     "pilotErrorCode": 1305,
[2026-05-13 18:54:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 18:54:10]  *** Listing of results directory ***
[2026-05-13 18:54:10] total 105280
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas    683926 May 13 16:27 pilot3.tar.gz
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas      5631 May 13 16:29 queuedata.json
[2026-05-13 18:54:10] -rwx------. 1 boincer umatlas     36281 May 13 16:30 runpilot2-wrapper.sh
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas       100 May 13 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 18:54:10] -rwxr-xr-x. 1 boincer umatlas      7986 May 13 18:47 run_atlas
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas       105 May 13 18:47 job.xml
[2026-05-13 18:54:10] -rw-r--r--. 2 boincer umatlas 103476451 May 13 18:47 EVNT.50238157._000150.pool.root.1
[2026-05-13 18:54:10] -rw-r--r--. 2 boincer umatlas     15667 May 13 18:47 start_atlas.sh
[2026-05-13 18:54:10] drwxrwx--x. 2 boincer umatlas      4096 May 13 18:47 shared
[2026-05-13 18:54:10] -rw-r--r--. 2 boincer umatlas    697442 May 13 18:47 input.tar.gz
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas         0 May 13 18:47 boinc_lockfile
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas      2559 May 13 18:47 pandaJob.out
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas        57 May 13 18:47 setup.sh.local
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas      6566 May 13 18:47 init_data.xml
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas    997597 May 13 18:48 agis_schedconf.cvmfs.json
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas   1502367 May 13 18:48 agis_ddmendpoints.agis.ALL.json
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas       442 May 13 18:49 workernode_map.json
[2026-05-13 18:54:10] drwx------. 5 boincer umatlas      4096 May 13 18:49 pilot3
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas       483 May 13 18:51 boinc_task_state.xml
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas       992 May 13 18:51 memory_monitor_summary.json
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas     21775 May 13 18:51 log.50250192._014405.job.log.tgz.1
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas      7097 May 13 18:53 heartbeat_new.json
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas      7059 May 13 18:53 heartbeat.json
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas        95 May 13 18:53 pilot_heartbeat.json
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas      8192 May 13 18:53 boinc_mmap_file
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas        23 May 13 18:53 wrapper_checkpoint.txt
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas      4821 May 13 18:54 pilotlog.txt
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas     81810 May 13 18:54 log.50250192._014405.job.log.1
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas       188 May 13 18:54 output.list
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas       410 May 13 18:54 runtime_log
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas    122880 May 13 18:54 result.tar.gz
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas      8811 May 13 18:54 runtime_log.err
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas       638 May 13 18:54 df4be3f51af0.diag
[2026-05-13 18:54:10] -rw-r--r--. 1 boincer umatlas     21872 May 13 18:54 stderr.txt
[2026-05-13 18:54:10] No HITS result produced
[2026-05-13 18:54:10]  *** Contents of shared directory: ***
[2026-05-13 18:54:10] total 101876
[2026-05-13 18:54:10] -rw-r--r--. 2 boincer umatlas 103476451 May 13 18:47 ATLAS.root_0
[2026-05-13 18:54:10] -rw-r--r--. 2 boincer umatlas     15667 May 13 18:47 start_atlas.sh
[2026-05-13 18:54:10] -rw-r--r--. 2 boincer umatlas    697442 May 13 18:47 input.tar.gz
[2026-05-13 18:54:10] -rw-------. 1 boincer umatlas    122880 May 13 18:54 result.tar.gz
18:54:11 (436702): run_atlas exited; CPU time 33.708555
18:54:11 (436702): called boinc_finish(0)

</stderr_txt>
]]>

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