Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:55:17 (2010405): wrapper (7.7.26015): starting
00:55:17 (2010405): wrapper: running run_atlas (--nthreads 3)
[2026-05-14 00:55:17] Arguments: --nthreads 3
[2026-05-14 00:55:17] Threads: 3
[2026-05-14 00:55:17] Checking for CVMFS
[2026-05-14 00:55:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 00:55:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 00:55:18] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 00:55:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 00:55:18] 2.9.2.0 1881569 258 64896 159501 1 186 34342248 36864000 0 130560 0 406731 99.995 6874 14751 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-05-14 00:55:18] CVMFS is ok
[2026-05-14 00:55:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 00:55:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 00:55:18] Further information can be found at the LHC@home message board.
[2026-05-14 00:55:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 00:55:18] Checking for apptainer binary...
[2026-05-14 00:55:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 00:55:18] Running /usr/bin/apptainer --version
[2026-05-14 00:55:18] apptainer version 1.4.1-1.1
[2026-05-14 00:55:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 00:55:18] legendA269a
[2026-05-14 00:55:18] apptainer works
[2026-05-14 00:55:18] Set ATHENA_PROC_NUMBER=3
[2026-05-14 00:55:18] Set ATHENA_CORE_NUMBER=3
[2026-05-14 00:55:18] Starting ATLAS job with PandaID=7138587372
[2026-05-14 00:55:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 00:58:49]  *** The last 200 lines of the pilot log: ***
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | found no stored workdir sizes
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | wrong length of table data, x=[1778712946.0], y=[6660.0] (must be same and length>=4)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | could have reported an average CPU frequency of 3778 MHz (4 samples)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | ..............................
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | . Timing measurements:
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . get job = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . initial setup = 3 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . payload setup = 5 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . stage-in = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . payload execution = 36 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . stage-out = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . log creation = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | ..............................
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7138587372/pilotlog.txt
[2026-05-14 00:58:49] 2026-05-13 22:58:18,603 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 00:58:49] - Log from pilotlog.txt -
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | extracted standard info from prmon json
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | found no stored workdir sizes
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | wrong length of table data, x=[1778712946.0], y=[6660.0] (must be same and length>=4)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | could have reported an average CPU frequency of 3778 MHz (4 samples)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | ..............................
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | . Timing measurements:
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . get job = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . initial setup = 3 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . payload setup = 5 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . stage-in = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . payload execution = 36 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . stage-out = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . log creation = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | ..............................
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7138587372/pilotlog.txt
[2026-05-14 00:58:49] 2026-05-13 22:58:18,604 | WARNING  | 
[2026-05-14 00:58:49] [begin log extracts]
[2026-05-14 00:58:49] - Log from pilotlog.txt -
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | extracted standard info from prmon json
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | found no stored workdir sizes
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | WARNING  | wrong length of table data, x=[1778712946.0], y=[6660.0] (must be same and length>=4)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | could have reported an average CPU frequency of 3778 MHz (4 samples)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | ..............................
[2026-05-14 00:58:49] 2026-05-13 22:58:18,589 | INFO     | . Timing measurements:
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . get job = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . initial setup = 3 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . payload setup = 5 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . stage-in = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . payload execution = 36 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . stage-out = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | . log creation = 0 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | ..............................
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 00:58:49] 2026-05-13 22:58:18,590 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7138587372/pilotlog.txt
[2026-05-14 00:58:49] [end log extracts]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,604 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,604 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 00:58:49] 2026-05-13 22:58:18,663 | INFO     | 
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | job summary report
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | --------------------------------------------------
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | PanDA job id: 7138587372
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | task id: 50250192
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-13 22:56:16,011 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | pilot state: failed 
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | transexitcode: 65
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | exeerrorcode: 65
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | exitcode: 65
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | cpuconsumptiontime: 11 s
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | nevents: 0
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | neventsw: 0
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | pid: 2018588
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | pgrp: 2018588
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | corecount: 3
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | event service: False
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | sizes: {0: 2267453, 11: 2267453, 44: 2290920, 45: 2295246, 160: 2295384}
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | --------------------------------------------------
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | 
[2026-05-14 00:58:49] 2026-05-13 22:58:18,664 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-05-14 00:58:49] 2026-05-13 22:58:18,681 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,681 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | job 7138587372 has completed (purged errors)
[2026-05-14 00:58:49] 2026-05-13 22:58:18,682 | INFO     | overall cleanup function is called
[2026-05-14 00:58:49] 2026-05-13 22:58:19,688 | INFO     | --- collectZombieJob: --- 10, [2018588]
[2026-05-14 00:58:49] 2026-05-13 22:58:19,689 | INFO     | zombie collector waiting for pid 2018588
[2026-05-14 00:58:49] 2026-05-13 22:58:19,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 00:58:49] 2026-05-13 22:58:19,689 | INFO     | collected zombie processes
[2026-05-14 00:58:49] 2026-05-13 22:58:19,689 | INFO     | will attempt to kill all subprocesses of pid=2018588
[2026-05-14 00:58:49] 2026-05-13 22:58:19,730 | INFO     | process IDs to be killed: [2018588] (in reverse order)
[2026-05-14 00:58:49] 2026-05-13 22:58:19,761 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 00:58:49] 2026-05-13 22:58:19,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 00:58:49] 2026-05-13 22:58:19,763 | INFO     | did not find any defunct processes belonging to 2018588
[2026-05-14 00:58:49] 2026-05-13 22:58:19,764 | INFO     | did not find any defunct processes belonging to 2018588
[2026-05-14 00:58:49] 2026-05-13 22:58:19,764 | INFO     | Ready for new job
[2026-05-14 00:58:49] 2026-05-13 22:58:19,765 | INFO     | ***************************************
[2026-05-14 00:58:49] 2026-05-13 22:58:19,765 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 00:58:49] 2026-05-13 22:58:19,765 | INFO     | ***************************************
[2026-05-14 00:58:49] 2026-05-13 22:58:19,765 | INFO     | 
[2026-05-14 00:58:49] 2026-05-13 22:58:19,765 | INFO     | architecture information:
[2026-05-14 00:58:49] 2026-05-13 22:58:19,766 | INFO     | executing command: cat /etc/os-release
[2026-05-14 00:58:49] 2026-05-13 22:58:19,775 | INFO     | cat /etc/os-release:
[2026-05-14 00:58:49] NAME="CentOS Linux"
[2026-05-14 00:58:49] VERSION="7 (Core)"
[2026-05-14 00:58:49] ID="centos"
[2026-05-14 00:58:49] ID_LIKE="rhel fedora"
[2026-05-14 00:58:49] VERSION_ID="7"
[2026-05-14 00:58:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 00:58:49] ANSI_COLOR="0;31"
[2026-05-14 00:58:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 00:58:49] HOME_URL="https://www.centos.org/"
[2026-05-14 00:58:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 00:58:49] 
[2026-05-14 00:58:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 00:58:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 00:58:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 00:58:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 00:58:49] 
[2026-05-14 00:58:49] 2026-05-13 22:58:19,775 | INFO     | ***************************************
[2026-05-14 00:58:49] 2026-05-13 22:58:20,279 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-05-14 00:58:49] 2026-05-13 22:58:20,293 | INFO     | sufficient remaining disk space (371734872064 B)
[2026-05-14 00:58:49] 2026-05-13 22:58:20,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 00:58:49] 2026-05-13 22:58:20,293 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 00:58:49] 2026-05-13 22:58:20,293 | INFO     | update_server=False
[2026-05-14 00:58:49] 2026-05-13 22:58:20,294 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 00:58:49] 2026-05-13 22:58:20,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 00:58:49] 2026-05-13 22:58:20,421 | INFO     | all data control threads have been joined
[2026-05-14 00:58:49] 2026-05-13 22:58:20,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 00:58:49] 2026-05-13 22:58:20,478 | INFO     | aborting loop
[2026-05-14 00:58:49] 2026-05-13 22:58:21,200 | INFO     | all job control threads have been joined
[2026-05-14 00:58:49] 2026-05-13 22:58:21,297 | INFO     | [job] queue monitor thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:21,299 | INFO     | [job] retrieve thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:21,329 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:21,427 | INFO     | [data] copytool_in thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:21,427 | INFO     | [data] control thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:21,484 | INFO     | [job] job monitor thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:21,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 00:58:49] 2026-05-13 22:58:21,770 | INFO     | all payload control threads have been joined
[2026-05-14 00:58:49] 2026-05-13 22:58:21,988 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:22,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 00:58:49] 2026-05-13 22:58:22,205 | INFO     | [job] control thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:22,331 | INFO     | [payload] failed_post thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:22,376 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:22,545 | INFO     | [payload] validate_post thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:22,705 | INFO     | [job] validate thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:22,752 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:22,775 | INFO     | [payload] control thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:23,626 | INFO     | [data] copytool_out thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:26,105 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 00:58:49] 2026-05-13 22:58:26,957 | INFO     | [monitor] cgroup control has ended
[2026-05-14 00:58:49] 2026-05-13 22:58:28,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953281029952)>', '<ExcThread(monitor, started 139952935376640)>']
[2026-05-14 00:58:49] 2026-05-13 22:58:33,245 | INFO     | all workflow threads have been joined
[2026-05-14 00:58:49] 2026-05-13 22:58:33,245 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 00:58:49] 2026-05-13 22:58:33,245 | INFO     | traces error code: 0
[2026-05-14 00:58:49] 2026-05-13 22:58:33,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 00:58:49] 2026-05-13 22:58:49,825 | INFO     | PID=2014139 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 00:58:49] 2026-05-13 22:58:49,826 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 00:58:49] 2026-05-13 22:58:49,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 00:58:49] 2026-05-13 22:58:49,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 00:58:49] 2026-05-13 22:58:49,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 00:58:49] 2026-05-13 22:58:49,826 | INFO     | [monitor] control thread has ended
[2026-05-14 00:58:49] 2026-05-13 22:58:49,874 [wrapper] ==== pilot stdout END ====
[2026-05-14 00:58:49] 2026-05-13 22:58:49,876 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 00:58:49] 2026-05-13 22:58:49,879 [wrapper] pilotpid: 2014139
[2026-05-14 00:58:49] 2026-05-13 22:58:49,882 [wrapper] Pilot exit status: 0
[2026-05-14 00:58:49] 2026-05-13 22:58:49,889 [wrapper] pandaids: 7138587372
[2026-05-14 00:58:49] 2026-05-13 22:58:49,908 [wrapper] cleanup supervisor_pilot 2014145 2014140
[2026-05-14 00:58:49] 2026-05-13 22:58:49,911 [wrapper] Test setup, not cleaning
[2026-05-14 00:58:49] 2026-05-13 22:58:49,913 [wrapper] apfmon messages muted
[2026-05-14 00:58:49] 2026-05-13 22:58:49,916 [wrapper] ==== wrapper stdout END ====
[2026-05-14 00:58:49] 2026-05-13 22:58:49,918 [wrapper] ==== wrapper stderr END ====
[2026-05-14 00:58:49]  *** Error codes and diagnostics ***
[2026-05-14 00:58:49]     "exeErrorCode": 65,
[2026-05-14 00:58:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 00:58:49]     "pilotErrorCode": 1305,
[2026-05-14 00:58:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 00:58:49]  *** Listing of results directory ***
[2026-05-14 00:58:49] total 105760
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc    683926 May 13 22:27 pilot3.tar.gz
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc      5631 May 13 22:29 queuedata.json
[2026-05-14 00:58:49] -rwx------ 1 boinc boinc     36281 May 13 22:30 runpilot2-wrapper.sh
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc       100 May 14 00:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 00:58:49] -rwxr-xr-x 1 boinc boinc      7986 May 14 00:55 run_atlas
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc       105 May 14 00:55 job.xml
[2026-05-14 00:58:49] -rw-r--r-- 2 boinc boinc 103988979 May 14 00:55 EVNT.50238157._000149.pool.root.1
[2026-05-14 00:58:49] drwxrwx--x 2 boinc boinc      4096 May 14 00:55 shared
[2026-05-14 00:58:49] -rw-r--r-- 2 boinc boinc    697439 May 14 00:55 input.tar.gz
[2026-05-14 00:58:49] -rw-r--r-- 2 boinc boinc     15667 May 14 00:55 start_atlas.sh
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc         0 May 14 00:55 boinc_setup_complete
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc      6364 May 14 00:55 init_data.xml
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc         0 May 14 00:55 boinc_lockfile
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc      2559 May 14 00:55 pandaJob.out
[2026-05-14 00:58:49] -rw------- 1 boinc boinc    997597 May 14 00:55 agis_schedconf.cvmfs.json
[2026-05-14 00:58:49] -rw------- 1 boinc boinc   1502367 May 14 00:55 agis_ddmendpoints.agis.ALL.json
[2026-05-14 00:58:49] -rw------- 1 boinc boinc       428 May 14 00:55 workernode_map.json
[2026-05-14 00:58:49] drwx------ 5 boinc boinc      4096 May 14 00:55 pilot3
[2026-05-14 00:58:49] -rw------- 1 boinc boinc       955 May 14 00:56 memory_monitor_summary.json
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc       481 May 14 00:56 boinc_task_state.xml
[2026-05-14 00:58:49] -rw------- 1 boinc boinc     20877 May 14 00:56 log.50250192._014396.job.log.tgz.1
[2026-05-14 00:58:49] -rw------- 1 boinc boinc      7043 May 14 00:58 heartbeat_new.json
[2026-05-14 00:58:49] -rw------- 1 boinc boinc      7005 May 14 00:58 heartbeat.json
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc        22 May 14 00:58 wrapper_checkpoint.txt
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc      8192 May 14 00:58 boinc_mmap_file
[2026-05-14 00:58:49] -rw------- 1 boinc boinc       747 May 14 00:58 pilotlog.txt
[2026-05-14 00:58:49] -rw------- 1 boinc boinc        95 May 14 00:58 pilot_heartbeat.json
[2026-05-14 00:58:49] -rw------- 1 boinc boinc     75162 May 14 00:58 log.50250192._014396.job.log.1
[2026-05-14 00:58:49] -rw------- 1 boinc boinc       188 May 14 00:58 output.list
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc       410 May 14 00:58 runtime_log
[2026-05-14 00:58:49] -rw------- 1 boinc boinc    112640 May 14 00:58 result.tar.gz
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc      8391 May 14 00:58 runtime_log.err
[2026-05-14 00:58:49] -rw------- 1 boinc boinc       652 May 14 00:58 df4b8d626e69.diag
[2026-05-14 00:58:49] -rw-r--r-- 1 boinc boinc     21603 May 14 00:58 stderr.txt
[2026-05-14 00:58:49] No HITS result produced
[2026-05-14 00:58:49]  *** Contents of shared directory: ***
[2026-05-14 00:58:49] total 102368
[2026-05-14 00:58:49] -rw-r--r-- 2 boinc boinc 103988979 May 14 00:55 ATLAS.root_0
[2026-05-14 00:58:49] -rw-r--r-- 2 boinc boinc    697439 May 14 00:55 input.tar.gz
[2026-05-14 00:58:49] -rw-r--r-- 2 boinc boinc     15667 May 14 00:55 start_atlas.sh
[2026-05-14 00:58:49] -rw------- 1 boinc boinc    112640 May 14 00:58 result.tar.gz
00:58:51 (2010405): run_atlas exited; CPU time 9.956627
00:58:51 (2010405): called boinc_finish(0)

</stderr_txt>
]]>

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