Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:59:48 (43507): wrapper (7.7.26015): starting
02:59:48 (43507): wrapper: running run_atlas (--nthreads 4)
[2026-05-14 02:59:48] Arguments: --nthreads 4
[2026-05-14 02:59:48] Threads: 4
[2026-05-14 02:59:48] Checking for CVMFS
[2026-05-14 02:59:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 02:59:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 02:59:50] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 02:59:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 02:59:50] 2.12.7.0 43650 0 25044 159505 3 1 3310879 4194304 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-05-14 02:59:50] CVMFS is ok
[2026-05-14 02:59:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 02:59:50] Checking for apptainer binary...
[2026-05-14 02:59:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 02:59:50] Running /usr/bin/apptainer --version
[2026-05-14 02:59:50] apptainer version 1.0.3
[2026-05-14 02:59:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 02:59:50] TeeC38
[2026-05-14 02:59:50] apptainer works
[2026-05-14 02:59:50] Set ATHENA_PROC_NUMBER=4
[2026-05-14 02:59:50] Set ATHENA_CORE_NUMBER=4
[2026-05-14 02:59:50] Starting ATLAS job with PandaID=7138653244
[2026-05-14 02:59:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 03:04:52]  *** The last 200 lines of the pilot log: ***
[2026-05-14 03:04:52] 2026-05-14 02:03:53,554 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 03:04:52] 2026-05-14 02:03:53,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | WARNING  | found no stored workdir sizes
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | WARNING  | wrong length of table data, x=[1778724066.0], y=[842.0] (must be same and length>=4)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | could have reported an average CPU frequency of 3200 MHz (4 samples)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | ..............................
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . Timing measurements:
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . get job = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . initial setup = 25 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . payload setup = 5 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . stage-in = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . payload execution = 47 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | . stage-out = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | . log creation = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | ..............................
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138653244/pilotlog.txt
[2026-05-14 03:04:52] 2026-05-14 02:03:53,580 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 03:04:52] - Log from pilotlog.txt -
[2026-05-14 03:04:52] 2026-05-14 02:03:53,554 | INFO     | extracted standard info from prmon json
[2026-05-14 03:04:52] 2026-05-14 02:03:53,554 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 03:04:52] 2026-05-14 02:03:53,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | WARNING  | found no stored workdir sizes
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | WARNING  | wrong length of table data, x=[1778724066.0], y=[842.0] (must be same and length>=4)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | could have reported an average CPU frequency of 3200 MHz (4 samples)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | ..............................
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . Timing measurements:
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . get job = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . initial setup = 25 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . payload setup = 5 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . stage-in = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . payload execution = 47 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | . stage-out = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | . log creation = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | ..............................
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138653244/pilotlog.txt
[2026-05-14 03:04:52] 2026-05-14 02:03:53,581 | WARNING  | 
[2026-05-14 03:04:52] [begin log extracts]
[2026-05-14 03:04:52] - Log from pilotlog.txt -
[2026-05-14 03:04:52] 2026-05-14 02:03:53,554 | INFO     | extracted standard info from prmon json
[2026-05-14 03:04:52] 2026-05-14 02:03:53,554 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 03:04:52] 2026-05-14 02:03:53,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | WARNING  | found no stored workdir sizes
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 03:04:52] 2026-05-14 02:03:53,555 | WARNING  | wrong length of table data, x=[1778724066.0], y=[842.0] (must be same and length>=4)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | could have reported an average CPU frequency of 3200 MHz (4 samples)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | ..............................
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . Timing measurements:
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . get job = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . initial setup = 25 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . payload setup = 5 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . stage-in = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,556 | INFO     | . payload execution = 47 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | . stage-out = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | . log creation = 0 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | ..............................
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 03:04:52] 2026-05-14 02:03:53,557 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7138653244/pilotlog.txt
[2026-05-14 03:04:52] [end log extracts]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,582 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,584 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 03:04:52] 2026-05-14 02:03:53,650 | INFO     | 
[2026-05-14 03:04:52] 2026-05-14 02:03:53,650 | INFO     | job summary report
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | --------------------------------------------------
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | PanDA job id: 7138653244
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | task id: 50250192
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 03:01:46,549 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | pilot state: failed 
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | transexitcode: 65
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | exeerrorcode: 65
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | exitcode: 65
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | cpuconsumptiontime: 14 s
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | nevents: 0
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | neventsw: 0
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | pid: 52108
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | pgrp: 52108
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | corecount: 4
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | event service: False
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | sizes: {0: 2267449, 10: 2267449, 55: 2295102, 58: 2295102, 175: 2295268}
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | --------------------------------------------------
[2026-05-14 03:04:52] 2026-05-14 02:03:53,651 | INFO     | 
[2026-05-14 03:04:52] 2026-05-14 02:03:53,652 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2026-05-14 03:04:52] 2026-05-14 02:03:53,664 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,664 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,664 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,664 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | job 7138653244 has completed (purged errors)
[2026-05-14 03:04:52] 2026-05-14 02:03:53,665 | INFO     | overall cleanup function is called
[2026-05-14 03:04:52] 2026-05-14 02:03:54,672 | INFO     | --- collectZombieJob: --- 10, [52108]
[2026-05-14 03:04:52] 2026-05-14 02:03:54,672 | INFO     | zombie collector waiting for pid 52108
[2026-05-14 03:04:52] 2026-05-14 02:03:54,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 03:04:52] 2026-05-14 02:03:54,673 | INFO     | collected zombie processes
[2026-05-14 03:04:52] 2026-05-14 02:03:54,673 | INFO     | will attempt to kill all subprocesses of pid=52108
[2026-05-14 03:04:52] 2026-05-14 02:03:54,725 | INFO     | process IDs to be killed: [52108] (in reverse order)
[2026-05-14 03:04:52] 2026-05-14 02:03:54,755 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 03:04:52] 2026-05-14 02:03:54,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 03:04:52] 2026-05-14 02:03:54,757 | INFO     | did not find any defunct processes belonging to 52108
[2026-05-14 03:04:52] 2026-05-14 02:03:54,758 | INFO     | did not find any defunct processes belonging to 52108
[2026-05-14 03:04:52] 2026-05-14 02:03:54,758 | INFO     | Ready for new job
[2026-05-14 03:04:52] 2026-05-14 02:03:54,759 | INFO     | ***************************************
[2026-05-14 03:04:52] 2026-05-14 02:03:54,759 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 03:04:52] 2026-05-14 02:03:54,760 | INFO     | ***************************************
[2026-05-14 03:04:52] 2026-05-14 02:03:54,760 | INFO     | 
[2026-05-14 03:04:52] 2026-05-14 02:03:54,780 | INFO     | architecture information:
[2026-05-14 03:04:52] 2026-05-14 02:03:54,781 | INFO     | executing command: cat /etc/os-release
[2026-05-14 03:04:52] 2026-05-14 02:03:54,789 | INFO     | cat /etc/os-release:
[2026-05-14 03:04:52] NAME="CentOS Linux"
[2026-05-14 03:04:52] VERSION="7 (Core)"
[2026-05-14 03:04:52] ID="centos"
[2026-05-14 03:04:52] ID_LIKE="rhel fedora"
[2026-05-14 03:04:52] VERSION_ID="7"
[2026-05-14 03:04:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 03:04:52] ANSI_COLOR="0;31"
[2026-05-14 03:04:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 03:04:52] HOME_URL="https://www.centos.org/"
[2026-05-14 03:04:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 03:04:52] 
[2026-05-14 03:04:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 03:04:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 03:04:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 03:04:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 03:04:52] 
[2026-05-14 03:04:52] 2026-05-14 02:03:54,790 | INFO     | ***************************************
[2026-05-14 03:04:52] 2026-05-14 02:03:55,293 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2026-05-14 03:04:52] 2026-05-14 02:03:55,305 | INFO     | sufficient remaining disk space (429961248768 B)
[2026-05-14 03:04:52] 2026-05-14 02:03:55,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 03:04:52] 2026-05-14 02:03:55,306 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 03:04:52] 2026-05-14 02:03:55,306 | INFO     | update_server=False
[2026-05-14 03:04:52] 2026-05-14 02:03:55,306 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 03:04:52] 2026-05-14 02:03:55,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 03:04:52] 2026-05-14 02:03:55,306 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 03:04:52] 2026-05-14 02:03:55,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 03:04:52] 2026-05-14 02:03:55,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 03:04:52] 2026-05-14 02:03:55,404 | INFO     | aborting loop
[2026-05-14 03:04:52] 2026-05-14 02:03:55,587 | INFO     | all data control threads have been joined
[2026-05-14 03:04:52] 2026-05-14 02:03:56,292 | INFO     | all job control threads have been joined
[2026-05-14 03:04:52] 2026-05-14 02:03:56,312 | INFO     | [job] retrieve thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:56,313 | INFO     | [job] queue monitor thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:56,363 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:56,372 | INFO     | [data] copytool_in thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:56,388 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:56,410 | INFO     | [job] job monitor thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:56,532 | INFO     | all payload control threads have been joined
[2026-05-14 03:04:52] 2026-05-14 02:03:56,572 | INFO     | [payload] failed_post thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:56,593 | INFO     | [data] control thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:56,735 | INFO     | [payload] validate_post thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:57,298 | INFO     | [job] control thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:57,312 | INFO     | [data] copytool_out thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:57,537 | INFO     | [payload] control thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:57,544 | INFO     | [job] validate thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:57,662 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:57,734 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:03:59,313 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 03:04:52] 2026-05-14 02:04:25,588 | INFO     | PID=47728 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-14 03:04:52] 2026-05-14 02:04:25,589 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 03:04:52] 2026-05-14 02:04:25,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 03:04:52] 2026-05-14 02:04:25,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 03:04:52] 2026-05-14 02:04:46,834 | INFO     | [monitor] cgroup control has ended
[2026-05-14 03:04:52] 2026-05-14 02:04:47,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569001805632)>', '<ExcThread(monitor, started 140568550164224)>']
[2026-05-14 03:04:52] 2026-05-14 02:04:47,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 03:04:52] 2026-05-14 02:04:47,705 | INFO     | [monitor] control thread has ended
[2026-05-14 03:04:52] 2026-05-14 02:04:52,378 | INFO     | all workflow threads have been joined
[2026-05-14 03:04:52] 2026-05-14 02:04:52,379 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 03:04:52] 2026-05-14 02:04:52,379 | INFO     | traces error code: 0
[2026-05-14 03:04:52] 2026-05-14 02:04:52,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 03:04:52] 2026-05-14 02:04:52,456 [wrapper] ==== pilot stdout END ====
[2026-05-14 03:04:52] 2026-05-14 02:04:52,458 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 03:04:52] 2026-05-14 02:04:52,460 [wrapper] pilotpid: 47728
[2026-05-14 03:04:52] 2026-05-14 02:04:52,462 [wrapper] Pilot exit status: 0
[2026-05-14 03:04:52] 2026-05-14 02:04:52,469 [wrapper] pandaids: 7138653244
[2026-05-14 03:04:52] 2026-05-14 02:04:52,484 [wrapper] cleanup supervisor_pilot   47734 47729
[2026-05-14 03:04:52] 2026-05-14 02:04:52,487 [wrapper] Test setup, not cleaning
[2026-05-14 03:04:52] 2026-05-14 02:04:52,489 [wrapper] apfmon messages muted
[2026-05-14 03:04:52] 2026-05-14 02:04:52,490 [wrapper] ==== wrapper stdout END ====
[2026-05-14 03:04:52] 2026-05-14 02:04:52,492 [wrapper] ==== wrapper stderr END ====
[2026-05-14 03:04:52]  *** Error codes and diagnostics ***
[2026-05-14 03:04:52]     "exeErrorCode": 65,
[2026-05-14 03:04:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 03:04:52]     "pilotErrorCode": 1305,
[2026-05-14 03:04:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 03:04:52]  *** Listing of results directory ***
[2026-05-14 03:04:52] total 104964
[2026-05-14 03:04:52] -rw-r--r-- 1 m m    683926 May 13 22:11 pilot3.tar.gz
[2026-05-14 03:04:52] -rw-r--r-- 1 m m      5631 May 13 23:04 queuedata.json
[2026-05-14 03:04:52] -rwx------ 1 m m     36281 May 13 23:04 runpilot2-wrapper.sh
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m       100 May 14 02:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 03:04:52] -rwxr-xr-x 1 m m      7986 May 14 02:59 run_atlas
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m       105 May 14 02:59 job.xml
[2026-05-14 03:04:52] -rw-r--r-- 2 m m     15667 May 14 02:59 start_atlas.sh
[2026-05-14 03:04:52] drwxrwx--x 2 m m      4096 May 14 02:59 shared
[2026-05-14 03:04:52] -rw-r--r-- 2 m m    697444 May 14 02:59 input.tar.gz
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m      5872 May 14 02:59 init_data.xml
[2026-05-14 03:04:52] -rw-r--r-- 2 m m 103166455 May 14 02:59 EVNT.50238157._000296.pool.root.1
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m         0 May 14 02:59 boinc_lockfile
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m      2559 May 14 02:59 pandaJob.out
[2026-05-14 03:04:52] -rw------- 1 m m    997597 May 14 03:00 agis_schedconf.cvmfs.json
[2026-05-14 03:04:52] -rw------- 1 m m   1502367 May 14 03:00 agis_ddmendpoints.agis.ALL.json
[2026-05-14 03:04:52] -rw------- 1 m m       412 May 14 03:00 workernode_map.json
[2026-05-14 03:04:52] drwx------ 5 m m      4096 May 14 03:00 pilot3
[2026-05-14 03:04:52] -rw------- 1 m m       945 May 14 03:01 memory_monitor_summary.json
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m       481 May 14 03:01 boinc_task_state.xml
[2026-05-14 03:04:52] -rw------- 1 m m     21649 May 14 03:01 log.50250192._017623.job.log.tgz.1
[2026-05-14 03:04:52] -rw------- 1 m m      7005 May 14 03:03 heartbeat_new.json
[2026-05-14 03:04:52] -rw------- 1 m m      6967 May 14 03:03 heartbeat.json
[2026-05-14 03:04:52] -rw------- 1 m m        95 May 14 03:04 pilot_heartbeat.json
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m        22 May 14 03:04 wrapper_checkpoint.txt
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m      8192 May 14 03:04 boinc_mmap_file
[2026-05-14 03:04:52] -rw------- 1 m m      4745 May 14 03:04 pilotlog.txt
[2026-05-14 03:04:52] -rw------- 1 m m     75951 May 14 03:04 log.50250192._017623.job.log.1
[2026-05-14 03:04:52] -rw------- 1 m m       188 May 14 03:04 output.list
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m       410 May 14 03:04 runtime_log
[2026-05-14 03:04:52] -rw------- 1 m m    112640 May 14 03:04 result.tar.gz
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m      8198 May 14 03:04 runtime_log.err
[2026-05-14 03:04:52] -rw------- 1 m m       622 May 14 03:04 f57d7d5af39b.diag
[2026-05-14 03:04:52] -rw-rw-r-- 1 m m     21234 May 14 03:04 stderr.txt
[2026-05-14 03:04:52] No HITS result produced
[2026-05-14 03:04:52]  *** Contents of shared directory: ***
[2026-05-14 03:04:52] total 101568
[2026-05-14 03:04:52] -rw-r--r-- 2 m m     15667 May 14 02:59 start_atlas.sh
[2026-05-14 03:04:52] -rw-r--r-- 2 m m    697444 May 14 02:59 input.tar.gz
[2026-05-14 03:04:52] -rw-r--r-- 2 m m 103166455 May 14 02:59 ATLAS.root_0
[2026-05-14 03:04:52] -rw------- 1 m m    112640 May 14 03:04 result.tar.gz
03:04:54 (43507): run_atlas exited; CPU time 20.237750
03:04:54 (43507): called boinc_finish(0)

</stderr_txt>
]]>

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