Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:00 (4054233): wrapper (7.7.26015): starting
18:02:00 (4054233): wrapper: running run_atlas (--nthreads 8)
[2026-05-13 18:02:00] Arguments: --nthreads 8
[2026-05-13 18:02:00] Threads: 8
[2026-05-13 18:02:00] Checking for CVMFS
[2026-05-13 18:02:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 18:02:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 18:02:01] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 18:02:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 18:02:02] 2.13.3.0 8216 19133 157104 159500 3 678 36555519 40960001 25259 16776704 0 208896395 99.605 208791662 46720 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-13 18:02:02] CVMFS is ok
[2026-05-13 18:02:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 18:02:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 18:02:02] Further information can be found at the LHC@home message board.
[2026-05-13 18:02:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 18:02:02] Checking for apptainer binary...
[2026-05-13 18:02:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-13 18:02:02] Running /usr/bin/apptainer --version
[2026-05-13 18:02:02] apptainer version 1.4.5-3.el9
[2026-05-13 18:02:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 18:02:03] c-208-36.aglt2.org
[2026-05-13 18:02:03] apptainer works
[2026-05-13 18:02:03] Set ATHENA_PROC_NUMBER=8
[2026-05-13 18:02:03] Set ATHENA_CORE_NUMBER=8
[2026-05-13 18:02:03] Starting ATLAS job with PandaID=7138547048
[2026-05-13 18:02:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 18:12:10]  *** The last 200 lines of the pilot log: ***
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | INFO     | extracted standard info from prmon json
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | WARNING  | wrong length of table data, x=[1778709984.0, 1778710045.0, 1778710106.0], y=[1979.0, 16143.0, 419029.0] (must be same and length>=4)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | could have reported an average CPU frequency of 3799 MHz (4 samples)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | ..............................
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . Timing measurements:
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . get job = 0 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . initial setup = 34 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . payload setup = 113 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . stage-in = 0 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . payload execution = 192 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . stage-out = 1 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . log creation = 0 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | ..............................
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 18:12:10] 2026-05-13 22:11:12,242 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-7138547048/pilotlog.txt
[2026-05-13 18:12:10] 2026-05-13 22:11:12,363 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 18:12:10] - Log from pilotlog.txt -
[2026-05-13 18:12:10] 2026-05-13 22:11:12,170 | INFO     | payload/TRF did not report the number of read events
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7138547048/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | INFO     | extracted standard info from prmon json
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | WARNING  | wrong length of table data, x=[1778709984.0, 1778710045.0, 1778710106.0], y=[1979.0, 16143.0, 419029.0] (must be same and length>=4)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | could have reported an average CPU frequency of 3799 MHz (4 samples)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | ..............................
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . Timing measurements:
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . get job = 0 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . initial setup = 34 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . payload setup = 113 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . stage-in = 0 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . payload execution = 192 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . stage-out = 1 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . log creation = 0 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | ..............................
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 18:12:10] 2026-05-13 22:11:12,242 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-7138547048/pilotlog.txt
[2026-05-13 18:12:10] 2026-05-13 22:11:12,363 | WARNING  | 
[2026-05-13 18:12:10] [begin log extracts]
[2026-05-13 18:12:10] - Log from pilotlog.txt -
[2026-05-13 18:12:10] 2026-05-13 22:11:12,170 | INFO     | payload/TRF did not report the number of read events
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7138547048/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | INFO     | extracted standard info from prmon json
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 18:12:10] 2026-05-13 22:11:12,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | WARNING  | wrong length of table data, x=[1778709984.0, 1778710045.0, 1778710106.0], y=[1979.0, 16143.0, 419029.0] (must be same and length>=4)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | could have reported an average CPU frequency of 3799 MHz (4 samples)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | ..............................
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . Timing measurements:
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . get job = 0 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . initial setup = 34 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . payload setup = 113 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . stage-in = 0 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . payload execution = 192 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . stage-out = 1 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | . log creation = 0 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | ..............................
[2026-05-13 18:12:10] 2026-05-13 22:11:12,228 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 18:12:10] 2026-05-13 22:11:12,242 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-7138547048/pilotlog.txt
[2026-05-13 18:12:10] [end log extracts]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,364 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,364 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | 
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | job summary report
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | --------------------------------------------------
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | PanDA job id: 7138547048
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | task id: 50250192
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-13 22:08:57,876 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | pilot state: failed 
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | transexitcode: 65
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | exeerrorcode: 65
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,472 | INFO     | exitcode: 65
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | cpuconsumptiontime: 23 s
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | nevents: 0
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | neventsw: 0
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | pid: 4085240
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | pgrp: 4085240
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | corecount: 8
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | event service: False
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | sizes: {0: 2265650, 1: 2267479, 310: 2291005, 312: 2295356, 428: 2295494}
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | --------------------------------------------------
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | 
[2026-05-13 18:12:10] 2026-05-13 22:11:12,473 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-05-13 18:12:10] 2026-05-13 22:11:12,499 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,499 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,501 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,501 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 18:12:10] 2026-05-13 22:11:12,501 | INFO     | job 7138547048 has completed (purged errors)
[2026-05-13 18:12:10] 2026-05-13 22:11:12,501 | INFO     | overall cleanup function is called
[2026-05-13 18:12:10] 2026-05-13 22:11:13,508 | INFO     | --- collectZombieJob: --- 10, [4085240]
[2026-05-13 18:12:10] 2026-05-13 22:11:13,508 | INFO     | zombie collector waiting for pid 4085240
[2026-05-13 18:12:10] 2026-05-13 22:11:13,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 18:12:10] 2026-05-13 22:11:13,508 | INFO     | collected zombie processes
[2026-05-13 18:12:10] 2026-05-13 22:11:13,508 | INFO     | will attempt to kill all subprocesses of pid=4085240
[2026-05-13 18:12:10] 2026-05-13 22:11:14,297 | INFO     | process IDs to be killed: [4085240] (in reverse order)
[2026-05-13 18:12:10] 2026-05-13 22:11:14,713 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 18:12:10] 2026-05-13 22:11:14,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 18:12:10] 2026-05-13 22:11:14,752 | INFO     | did not find any defunct processes belonging to 4085240
[2026-05-13 18:12:10] 2026-05-13 22:11:14,821 | INFO     | did not find any defunct processes belonging to 4085240
[2026-05-13 18:12:10] 2026-05-13 22:11:14,821 | INFO     | Ready for new job
[2026-05-13 18:12:10] 2026-05-13 22:11:14,837 | INFO     | ***************************************
[2026-05-13 18:12:10] 2026-05-13 22:11:14,837 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 18:12:10] 2026-05-13 22:11:14,838 | INFO     | ***************************************
[2026-05-13 18:12:10] 2026-05-13 22:11:14,838 | INFO     | 
[2026-05-13 18:12:10] 2026-05-13 22:11:14,842 | INFO     | architecture information:
[2026-05-13 18:12:10] 2026-05-13 22:11:14,842 | INFO     | executing command: cat /etc/os-release
[2026-05-13 18:12:10] 2026-05-13 22:11:14,890 | INFO     | cat /etc/os-release:
[2026-05-13 18:12:10] NAME="CentOS Linux"
[2026-05-13 18:12:10] VERSION="7 (Core)"
[2026-05-13 18:12:10] ID="centos"
[2026-05-13 18:12:10] ID_LIKE="rhel fedora"
[2026-05-13 18:12:10] VERSION_ID="7"
[2026-05-13 18:12:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 18:12:10] ANSI_COLOR="0;31"
[2026-05-13 18:12:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 18:12:10] HOME_URL="https://www.centos.org/"
[2026-05-13 18:12:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 18:12:10] 
[2026-05-13 18:12:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 18:12:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 18:12:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 18:12:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 18:12:10] 
[2026-05-13 18:12:10] 2026-05-13 22:11:14,890 | INFO     | ***************************************
[2026-05-13 18:12:10] 2026-05-13 22:11:15,412 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-05-13 18:12:10] 2026-05-13 22:11:15,471 | INFO     | sufficient remaining disk space (165774622720 B)
[2026-05-13 18:12:10] 2026-05-13 22:11:15,471 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 18:12:10] 2026-05-13 22:11:15,472 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 18:12:10] 2026-05-13 22:11:15,472 | INFO     | update_server=False
[2026-05-13 18:12:10] 2026-05-13 22:11:15,472 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 18:12:10] 2026-05-13 22:11:15,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 18:12:10] 2026-05-13 22:11:15,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 18:12:10] 2026-05-13 22:11:15,477 | INFO     | aborting loop
[2026-05-13 18:12:10] 2026-05-13 22:11:16,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 18:12:10] 2026-05-13 22:11:16,179 | INFO     | all data control threads have been joined
[2026-05-13 18:12:10] 2026-05-13 22:11:16,478 | INFO     | [job] retrieve thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:16,482 | INFO     | [job] job monitor thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:16,777 | INFO     | all payload control threads have been joined
[2026-05-13 18:12:10] 2026-05-13 22:11:16,787 | INFO     | all job control threads have been joined
[2026-05-13 18:12:10] 2026-05-13 22:11:16,862 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,017 | INFO     | [data] copytool_in thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,151 | INFO     | [payload] validate_post thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,185 | INFO     | [data] control thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,461 | INFO     | [job] validate thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,486 | INFO     | [data] copytool_out thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 18:12:10] 2026-05-13 22:11:17,619 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,714 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,743 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,790 | INFO     | [payload] control thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,793 | INFO     | [job] control thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:17,914 | INFO     | [payload] failed_post thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:18,494 | INFO     | [job] queue monitor thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:20,016 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 18:12:10] 2026-05-13 22:11:47,662 | INFO     | PID=4069214 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-13 18:12:10] 2026-05-13 22:11:47,662 | INFO     | .. there are 29 such processes running
[2026-05-13 18:12:10] 2026-05-13 22:11:47,677 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 18:12:10] 2026-05-13 22:11:47,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 18:12:10] 2026-05-13 22:11:47,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 18:12:10] 2026-05-13 22:12:03,178 | INFO     | [monitor] cgroup control has ended
[2026-05-13 18:12:10] 2026-05-13 22:12:03,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140207596382016)>', '<ExcThread(monitor, started 140207244433152)>']
[2026-05-13 18:12:10] 2026-05-13 22:12:03,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 18:12:10] 2026-05-13 22:12:03,799 | INFO     | [monitor] control thread has ended
[2026-05-13 18:12:10] 2026-05-13 22:12:08,714 | INFO     | all workflow threads have been joined
[2026-05-13 18:12:10] 2026-05-13 22:12:08,714 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 18:12:10] 2026-05-13 22:12:08,714 | INFO     | traces error code: 0
[2026-05-13 18:12:10] 2026-05-13 22:12:08,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 18:12:10] 2026-05-13 22:12:09,148 [wrapper] ==== pilot stdout END ====
[2026-05-13 18:12:10] 2026-05-13 22:12:09,169 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 18:12:10] 2026-05-13 22:12:09,188 [wrapper] pilotpid: 4069214
[2026-05-13 18:12:10] 2026-05-13 22:12:09,220 [wrapper] Pilot exit status: 0
[2026-05-13 18:12:10] 2026-05-13 22:12:09,297 [wrapper] pandaids: 7138547048
[2026-05-13 18:12:10] 2026-05-13 22:12:09,568 [wrapper] cleanup supervisor_pilot 4069248 4069215
[2026-05-13 18:12:10] 2026-05-13 22:12:09,609 [wrapper] Test setup, not cleaning
[2026-05-13 18:12:10] 2026-05-13 22:12:09,656 [wrapper] apfmon messages muted
[2026-05-13 18:12:10] 2026-05-13 22:12:09,680 [wrapper] ==== wrapper stdout END ====
[2026-05-13 18:12:10] 2026-05-13 22:12:09,706 [wrapper] ==== wrapper stderr END ====
[2026-05-13 18:12:10]  *** Error codes and diagnostics ***
[2026-05-13 18:12:10]     "exeErrorCode": 65,
[2026-05-13 18:12:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 18:12:10]     "pilotErrorCode": 1305,
[2026-05-13 18:12:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 18:12:10]  *** Listing of results directory ***
[2026-05-13 18:12:10] total 102224
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas    683926 May 13 16:27 pilot3.tar.gz
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas      5631 May 13 16:27 queuedata.json
[2026-05-13 18:12:10] -rwx------. 1 boincer umatlas     36281 May 13 16:27 runpilot2-wrapper.sh
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas       100 May 13 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 18:12:10] -rwxr-xr-x. 1 boincer umatlas      7986 May 13 18:02 run_atlas
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas       105 May 13 18:02 job.xml
[2026-05-13 18:12:10] -rw-r--r--. 2 boincer umatlas 100307120 May 13 18:02 EVNT.50238157._000124.pool.root.1
[2026-05-13 18:12:10] -rw-r--r--. 2 boincer umatlas     15667 May 13 18:02 start_atlas.sh
[2026-05-13 18:12:10] drwxrwx--x. 2 boincer umatlas      4096 May 13 18:02 shared
[2026-05-13 18:12:10] -rw-r--r--. 2 boincer umatlas    697441 May 13 18:02 input.tar.gz
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas         0 May 13 18:02 boinc_lockfile
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas      2560 May 13 18:02 pandaJob.out
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas        57 May 13 18:02 setup.sh.local
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas    997331 May 13 18:03 agis_schedconf.cvmfs.json
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas   1502367 May 13 18:03 agis_ddmendpoints.agis.ALL.json
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas       432 May 13 18:03 workernode_map.json
[2026-05-13 18:12:10] drwx------. 5 boincer umatlas      4096 May 13 18:04 pilot3
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas       482 May 13 18:08 boinc_task_state.xml
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas      1004 May 13 18:09 memory_monitor_summary.json
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas     23345 May 13 18:09 log.50250192._014015.job.log.tgz.1
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas      7093 May 13 18:10 init_data.xml
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas      7097 May 13 18:11 heartbeat_new.json
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas      7059 May 13 18:11 heartbeat.json
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas        95 May 13 18:11 pilot_heartbeat.json
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas        23 May 13 18:12 wrapper_checkpoint.txt
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas      4824 May 13 18:12 pilotlog.txt
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas     99249 May 13 18:12 log.50250192._014015.job.log.1
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas      8192 May 13 18:12 boinc_mmap_file
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas       188 May 13 18:12 output.list
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas       410 May 13 18:12 runtime_log
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas    143360 May 13 18:12 result.tar.gz
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas      8811 May 13 18:12 runtime_log.err
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas       639 May 13 18:12 dec9e67f382c.diag
[2026-05-13 18:12:10] -rw-r--r--. 1 boincer umatlas     21940 May 13 18:12 stderr.txt
[2026-05-13 18:12:10] No HITS result produced
[2026-05-13 18:12:10]  *** Contents of shared directory: ***
[2026-05-13 18:12:10] total 98800
[2026-05-13 18:12:10] -rw-r--r--. 2 boincer umatlas 100307120 May 13 18:02 ATLAS.root_0
[2026-05-13 18:12:10] -rw-r--r--. 2 boincer umatlas     15667 May 13 18:02 start_atlas.sh
[2026-05-13 18:12:10] -rw-r--r--. 2 boincer umatlas    697441 May 13 18:02 input.tar.gz
[2026-05-13 18:12:10] -rw-------. 1 boincer umatlas    143360 May 13 18:12 result.tar.gz
18:12:12 (4054233): run_atlas exited; CPU time 34.637368
18:12:12 (4054233): called boinc_finish(0)

</stderr_txt>
]]>

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