Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:18:16 (3958020): wrapper (7.7.26015): starting
15:18:16 (3958020): wrapper: running run_atlas (--nthreads 9)
[2026-05-13 15:18:16] Arguments: --nthreads 9
[2026-05-13 15:18:16] Threads: 9
[2026-05-13 15:18:16] Checking for CVMFS
[2026-05-13 15:18:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 15:18:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 15:18:16] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 15:18:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 15:18:17] 2.13.3.0 5937 18973 133784 159497 3 23 26490521 40960001 16943 16776704 0 71079247 99.812 35899177 44601 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-13 15:18:17] CVMFS is ok
[2026-05-13 15:18:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 15:18:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 15:18:17] Further information can be found at the LHC@home message board.
[2026-05-13 15:18:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 15:18:17] Checking for apptainer binary...
[2026-05-13 15:18:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-13 15:18:17] Running /usr/bin/apptainer --version
[2026-05-13 15:18:17] apptainer version 1.4.5-3.el9
[2026-05-13 15:18:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 15:18:17] c-212-3.aglt2.org
[2026-05-13 15:18:17] apptainer works
[2026-05-13 15:18:17] Set ATHENA_PROC_NUMBER=9
[2026-05-13 15:18:17] Set ATHENA_CORE_NUMBER=9
[2026-05-13 15:18:17] Starting ATLAS job with PandaID=7138244450
[2026-05-13 15:18:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 15:22:42]  *** The last 200 lines of the pilot log: ***
[2026-05-13 15:22:42] 2026-05-13 19:21:43,188 | WARNING  | found no stored workdir sizes
[2026-05-13 15:22:42] 2026-05-13 19:21:43,188 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 15:22:42] 2026-05-13 19:21:43,188 | WARNING  | wrong length of table data, x=[1778699950.0], y=[868.0] (must be same and length>=4)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,196 | INFO     | could have reported an average CPU frequency of 2965 MHz (4 samples)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,196 | INFO     | ..............................
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . Timing measurements:
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . get job = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . initial setup = 7 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . payload setup = 14 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . stage-in = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . payload execution = 35 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . stage-out = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . log creation = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | ..............................
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 15:22:42] 2026-05-13 19:21:43,198 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138244450/pilotlog.txt
[2026-05-13 15:22:42] 2026-05-13 19:21:43,227 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 15:22:42] - Log from pilotlog.txt -
[2026-05-13 15:22:42] 2026-05-13 19:21:43,187 | INFO     | extracted standard info from prmon json
[2026-05-13 15:22:42] 2026-05-13 19:21:43,187 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 15:22:42] 2026-05-13 19:21:43,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 15:22:42] 2026-05-13 19:21:43,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 15:22:42] 2026-05-13 19:21:43,188 | WARNING  | found no stored workdir sizes
[2026-05-13 15:22:42] 2026-05-13 19:21:43,188 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 15:22:42] 2026-05-13 19:21:43,188 | WARNING  | wrong length of table data, x=[1778699950.0], y=[868.0] (must be same and length>=4)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,196 | INFO     | could have reported an average CPU frequency of 2965 MHz (4 samples)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,196 | INFO     | ..............................
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . Timing measurements:
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . get job = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . initial setup = 7 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . payload setup = 14 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . stage-in = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . payload execution = 35 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . stage-out = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . log creation = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | ..............................
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 15:22:42] 2026-05-13 19:21:43,198 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138244450/pilotlog.txt
[2026-05-13 15:22:42] 2026-05-13 19:21:43,227 | WARNING  | 
[2026-05-13 15:22:42] [begin log extracts]
[2026-05-13 15:22:42] - Log from pilotlog.txt -
[2026-05-13 15:22:42] 2026-05-13 19:21:43,187 | INFO     | extracted standard info from prmon json
[2026-05-13 15:22:42] 2026-05-13 19:21:43,187 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 15:22:42] 2026-05-13 19:21:43,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 15:22:42] 2026-05-13 19:21:43,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 15:22:42] 2026-05-13 19:21:43,188 | WARNING  | found no stored workdir sizes
[2026-05-13 15:22:42] 2026-05-13 19:21:43,188 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 15:22:42] 2026-05-13 19:21:43,188 | WARNING  | wrong length of table data, x=[1778699950.0], y=[868.0] (must be same and length>=4)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,196 | INFO     | could have reported an average CPU frequency of 2965 MHz (4 samples)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,196 | INFO     | ..............................
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . Timing measurements:
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . get job = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . initial setup = 7 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . payload setup = 14 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . stage-in = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . payload execution = 35 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . stage-out = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | . log creation = 0 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | ..............................
[2026-05-13 15:22:42] 2026-05-13 19:21:43,197 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 15:22:42] 2026-05-13 19:21:43,198 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7138244450/pilotlog.txt
[2026-05-13 15:22:42] [end log extracts]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,227 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,228 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 15:22:42] 2026-05-13 19:21:43,321 | INFO     | 
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | job summary report
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | --------------------------------------------------
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | PanDA job id: 7138244450
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | task id: 50250192
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-13 19:19:33,523 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | pilot state: failed 
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | transexitcode: 65
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | exeerrorcode: 65
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,322 | INFO     | exitcode: 65
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | cpuconsumptiontime: 26 s
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | nevents: 0
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | neventsw: 0
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | pid: 3992071
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | pgrp: 3992071
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | corecount: 9
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | event service: False
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | sizes: {0: 2267505, 11: 2267505, 53: 2290881, 55: 2295176, 58: 2295204, 176: 2295370}
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | --------------------------------------------------
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | 
[2026-05-13 15:22:42] 2026-05-13 19:21:43,323 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-05-13 15:22:42] 2026-05-13 19:21:43,347 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,347 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,347 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,347 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,347 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 15:22:42] 2026-05-13 19:21:43,348 | INFO     | job 7138244450 has completed (purged errors)
[2026-05-13 15:22:42] 2026-05-13 19:21:43,349 | INFO     | overall cleanup function is called
[2026-05-13 15:22:42] 2026-05-13 19:21:44,355 | INFO     | --- collectZombieJob: --- 10, [3992071]
[2026-05-13 15:22:42] 2026-05-13 19:21:44,356 | INFO     | zombie collector waiting for pid 3992071
[2026-05-13 15:22:42] 2026-05-13 19:21:44,356 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 15:22:42] 2026-05-13 19:21:44,356 | INFO     | collected zombie processes
[2026-05-13 15:22:42] 2026-05-13 19:21:44,356 | INFO     | will attempt to kill all subprocesses of pid=3992071
[2026-05-13 15:22:42] 2026-05-13 19:21:44,702 | INFO     | process IDs to be killed: [3992071] (in reverse order)
[2026-05-13 15:22:42] 2026-05-13 19:21:44,873 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 15:22:42] 2026-05-13 19:21:44,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 15:22:42] 2026-05-13 19:21:44,888 | INFO     | did not find any defunct processes belonging to 3992071
[2026-05-13 15:22:42] 2026-05-13 19:21:44,902 | INFO     | did not find any defunct processes belonging to 3992071
[2026-05-13 15:22:42] 2026-05-13 19:21:44,903 | INFO     | Ready for new job
[2026-05-13 15:22:42] 2026-05-13 19:21:44,905 | INFO     | ***************************************
[2026-05-13 15:22:42] 2026-05-13 19:21:44,905 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 15:22:42] 2026-05-13 19:21:44,905 | INFO     | ***************************************
[2026-05-13 15:22:42] 2026-05-13 19:21:44,905 | INFO     | 
[2026-05-13 15:22:42] 2026-05-13 19:21:44,910 | INFO     | architecture information:
[2026-05-13 15:22:42] 2026-05-13 19:21:44,910 | INFO     | executing command: cat /etc/os-release
[2026-05-13 15:22:42] 2026-05-13 19:21:44,935 | INFO     | cat /etc/os-release:
[2026-05-13 15:22:42] NAME="CentOS Linux"
[2026-05-13 15:22:42] VERSION="7 (Core)"
[2026-05-13 15:22:42] ID="centos"
[2026-05-13 15:22:42] ID_LIKE="rhel fedora"
[2026-05-13 15:22:42] VERSION_ID="7"
[2026-05-13 15:22:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 15:22:42] ANSI_COLOR="0;31"
[2026-05-13 15:22:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 15:22:42] HOME_URL="https://www.centos.org/"
[2026-05-13 15:22:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 15:22:42] 
[2026-05-13 15:22:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 15:22:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 15:22:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 15:22:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 15:22:42] 
[2026-05-13 15:22:42] 2026-05-13 19:21:44,935 | INFO     | ***************************************
[2026-05-13 15:22:42] 2026-05-13 19:21:45,439 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-05-13 15:22:42] 2026-05-13 19:21:45,466 | INFO     | sufficient remaining disk space (128115015680 B)
[2026-05-13 15:22:42] 2026-05-13 19:21:45,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 15:22:42] 2026-05-13 19:21:45,467 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 15:22:42] 2026-05-13 19:21:45,467 | INFO     | update_server=False
[2026-05-13 15:22:42] 2026-05-13 19:21:45,467 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 15:22:42] 2026-05-13 19:21:45,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 15:22:42] 2026-05-13 19:21:45,744 | INFO     | all data control threads have been joined
[2026-05-13 15:22:42] 2026-05-13 19:21:45,858 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-13 15:22:42] 2026-05-13 19:21:45,860 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-13 15:22:42] 2026-05-13 19:21:45,861 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 15:22:42] 2026-05-13 19:21:45,861 | INFO     | will abort loop
[2026-05-13 15:22:42] 2026-05-13 19:21:46,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 15:22:42] 2026-05-13 19:21:46,473 | INFO     | [job] retrieve thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:46,611 | INFO     | all job control threads have been joined
[2026-05-13 15:22:42] 2026-05-13 19:21:46,759 | INFO     | [data] control thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:46,866 | INFO     | [job] job monitor thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:46,911 | INFO     | all payload control threads have been joined
[2026-05-13 15:22:42] 2026-05-13 19:21:47,041 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:47,058 | INFO     | [job] validate thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:47,242 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:47,377 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:47,471 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:47,543 | INFO     | [payload] failed_post thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:47,616 | INFO     | [data] copytool_in thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:47,624 | INFO     | [job] control thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:47,790 | INFO     | [payload] validate_post thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:47,917 | INFO     | [payload] control thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:48,046 | INFO     | [data] copytool_out thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:48,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 15:22:42] 2026-05-13 19:21:49,344 | INFO     | [job] queue monitor thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:21:49,477 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 15:22:42] 2026-05-13 19:22:15,931 | INFO     | PID=3971008 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-13 15:22:42] 2026-05-13 19:22:15,931 | INFO     | .. there are 16 such processes running
[2026-05-13 15:22:42] 2026-05-13 19:22:15,932 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 15:22:42] 2026-05-13 19:22:15,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 15:22:42] 2026-05-13 19:22:15,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 15:22:42] 2026-05-13 19:22:36,106 | INFO     | [monitor] cgroup control has ended
[2026-05-13 15:22:42] 2026-05-13 19:22:37,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990713939776)>', '<ExcThread(monitor, started 139990281475840)>']
[2026-05-13 15:22:42] 2026-05-13 19:22:38,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 15:22:42] 2026-05-13 19:22:38,067 | INFO     | [monitor] control thread has ended
[2026-05-13 15:22:42] 2026-05-13 19:22:42,197 | INFO     | all workflow threads have been joined
[2026-05-13 15:22:42] 2026-05-13 19:22:42,198 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 15:22:42] 2026-05-13 19:22:42,198 | INFO     | traces error code: 0
[2026-05-13 15:22:42] 2026-05-13 19:22:42,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 15:22:42] 2026-05-13 19:22:42,357 [wrapper] ==== pilot stdout END ====
[2026-05-13 15:22:42] 2026-05-13 19:22:42,360 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 15:22:42] 2026-05-13 19:22:42,364 [wrapper] pilotpid: 3971008
[2026-05-13 15:22:42] 2026-05-13 19:22:42,366 [wrapper] Pilot exit status: 0
[2026-05-13 15:22:42] 2026-05-13 19:22:42,408 [wrapper] pandaids: 7138244450
[2026-05-13 15:22:42] 2026-05-13 19:22:42,498 [wrapper] cleanup supervisor_pilot 3971014 3971009
[2026-05-13 15:22:42] 2026-05-13 19:22:42,530 [wrapper] Test setup, not cleaning
[2026-05-13 15:22:42] 2026-05-13 19:22:42,542 [wrapper] apfmon messages muted
[2026-05-13 15:22:42] 2026-05-13 19:22:42,547 [wrapper] ==== wrapper stdout END ====
[2026-05-13 15:22:42] 2026-05-13 19:22:42,566 [wrapper] ==== wrapper stderr END ====
[2026-05-13 15:22:42]  *** Error codes and diagnostics ***
[2026-05-13 15:22:42]     "exeErrorCode": 65,
[2026-05-13 15:22:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 15:22:42]     "pilotErrorCode": 1305,
[2026-05-13 15:22:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 15:22:42]  *** Listing of results directory ***
[2026-05-13 15:22:42] total 103564
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas    683926 May 13 09:56 pilot3.tar.gz
[2026-05-13 15:22:42] -rwx------. 1 boincer umatlas     36281 May 13 10:01 runpilot2-wrapper.sh
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas      5631 May 13 10:02 queuedata.json
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas       100 May 13 15:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 15:22:42] -rwxr-xr-x. 1 boincer umatlas      7986 May 13 15:18 run_atlas
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas       105 May 13 15:18 job.xml
[2026-05-13 15:22:42] -rw-r--r--. 2 boincer umatlas 101738591 May 13 15:18 EVNT.50238157._000422.pool.root.1
[2026-05-13 15:22:42] -rw-r--r--. 2 boincer umatlas     15667 May 13 15:18 start_atlas.sh
[2026-05-13 15:22:42] drwxrwx--x. 2 boincer umatlas      4096 May 13 15:18 shared
[2026-05-13 15:22:42] -rw-r--r--. 2 boincer umatlas    697449 May 13 15:18 input.tar.gz
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas         0 May 13 15:18 boinc_lockfile
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas      2562 May 13 15:18 pandaJob.out
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas        57 May 13 15:18 setup.sh.local
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas    995201 May 13 15:18 agis_schedconf.cvmfs.json
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas   1502367 May 13 15:18 agis_ddmendpoints.agis.ALL.json
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas       428 May 13 15:18 workernode_map.json
[2026-05-13 15:22:42] drwx------. 5 boincer umatlas      4096 May 13 15:18 pilot3
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas       481 May 13 15:19 boinc_task_state.xml
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas       959 May 13 15:19 memory_monitor_summary.json
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas     20509 May 13 15:19 log.50250192._012370.job.log.tgz.1
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas      6866 May 13 15:21 init_data.xml
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas        95 May 13 15:21 pilot_heartbeat.json
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas      7023 May 13 15:21 heartbeat_new.json
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas      6985 May 13 15:21 heartbeat.json
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas        23 May 13 15:22 wrapper_checkpoint.txt
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas      8192 May 13 15:22 boinc_mmap_file
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas      5010 May 13 15:22 pilotlog.txt
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas     76662 May 13 15:22 log.50250192._012370.job.log.1
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas       188 May 13 15:22 output.list
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas       410 May 13 15:22 runtime_log
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas    112640 May 13 15:22 result.tar.gz
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas      8806 May 13 15:22 runtime_log.err
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas       638 May 13 15:22 84493ede433a.diag
[2026-05-13 15:22:42] -rw-r--r--. 1 boincer umatlas     21644 May 13 15:22 stderr.txt
[2026-05-13 15:22:42] No HITS result produced
[2026-05-13 15:22:42]  *** Contents of shared directory: ***
[2026-05-13 15:22:42] total 100168
[2026-05-13 15:22:42] -rw-r--r--. 2 boincer umatlas 101738591 May 13 15:18 ATLAS.root_0
[2026-05-13 15:22:42] -rw-r--r--. 2 boincer umatlas     15667 May 13 15:18 start_atlas.sh
[2026-05-13 15:22:42] -rw-r--r--. 2 boincer umatlas    697449 May 13 15:18 input.tar.gz
[2026-05-13 15:22:42] -rw-------. 1 boincer umatlas    112640 May 13 15:22 result.tar.gz
15:22:44 (3958020): run_atlas exited; CPU time 24.571292
15:22:44 (3958020): called boinc_finish(0)

</stderr_txt>
]]>

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