Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:25:24 (3877211): wrapper (7.7.26015): starting
02:25:24 (3877211): wrapper: running run_atlas (--nthreads 12)
[2026-05-14 02:25:24] Arguments: --nthreads 12
[2026-05-14 02:25:24] Threads: 12
[2026-05-14 02:25:24] Checking for CVMFS
[2026-05-14 02:25:24] No cvmfs_config command found, will try listing directly
[2026-05-14 02:25:24] CVMFS is ok
[2026-05-14 02:25:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 02:25:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 02:25:24] Further information can be found at the LHC@home message board.
[2026-05-14 02:25:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 02:25:24] Checking for apptainer binary...
[2026-05-14 02:25:24] which: no apptainer in ((null))
[2026-05-14 02:25:24] apptainer is not installed, using version from CVMFS
[2026-05-14 02:25:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 02:25:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-05-14 02:25:24] apptainer works
[2026-05-14 02:25:24] Set ATHENA_PROC_NUMBER=12
[2026-05-14 02:25:24] Set ATHENA_CORE_NUMBER=12
[2026-05-14 02:25:24] Starting ATLAS job with PandaID=7138081482
[2026-05-14 02:25:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 02:28:35]  *** The last 200 lines of the pilot log: ***
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | found no stored workdir sizes
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | wrong length of table data, x=[1778718346.0], y=[13223.0] (must be same and length>=4)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | could have reported an average CPU frequency of 3423 MHz (4 samples)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | ..............................
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . Timing measurements:
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . get job = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . initial setup = 2 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . payload setup = 3 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . stage-in = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . payload execution = 11 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . stage-out = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . log creation = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | ..............................
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7138081482/pilotlog.txt
[2026-05-14 02:28:35] 2026-05-14 00:27:55,944 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 02:28:35] - Log from pilotlog.txt -
[2026-05-14 02:28:35] 2026-05-14 00:27:55,935 | INFO     | extracted standard info from prmon json
[2026-05-14 02:28:35] 2026-05-14 00:27:55,935 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | found no stored workdir sizes
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | wrong length of table data, x=[1778718346.0], y=[13223.0] (must be same and length>=4)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | could have reported an average CPU frequency of 3423 MHz (4 samples)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | ..............................
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . Timing measurements:
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . get job = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . initial setup = 2 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . payload setup = 3 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . stage-in = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . payload execution = 11 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . stage-out = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . log creation = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | ..............................
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7138081482/pilotlog.txt
[2026-05-14 02:28:35] 2026-05-14 00:27:55,944 | WARNING  | 
[2026-05-14 02:28:35] [begin log extracts]
[2026-05-14 02:28:35] - Log from pilotlog.txt -
[2026-05-14 02:28:35] 2026-05-14 00:27:55,935 | INFO     | extracted standard info from prmon json
[2026-05-14 02:28:35] 2026-05-14 00:27:55,935 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | found no stored workdir sizes
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | WARNING  | wrong length of table data, x=[1778718346.0], y=[13223.0] (must be same and length>=4)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | could have reported an average CPU frequency of 3423 MHz (4 samples)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | ..............................
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . Timing measurements:
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . get job = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . initial setup = 2 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . payload setup = 3 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . stage-in = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . payload execution = 11 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . stage-out = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | . log creation = 0 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | ..............................
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 02:28:35] 2026-05-14 00:27:55,936 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7138081482/pilotlog.txt
[2026-05-14 02:28:35] [end log extracts]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,944 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,945 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | 
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | job summary report
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | --------------------------------------------------
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | PanDA job id: 7138081482
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | task id: 50250204
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-14 02:25:51,137 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | pilot state: failed 
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | transexitcode: 65
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | exeerrorcode: 65
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | exitcode: 65
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | cpuconsumptiontime: 9 s
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | nevents: 0
[2026-05-14 02:28:35] 2026-05-14 00:27:55,972 | INFO     | neventsw: 0
[2026-05-14 02:28:35] 2026-05-14 00:27:55,973 | INFO     | pid: 3895675
[2026-05-14 02:28:35] 2026-05-14 00:27:55,973 | INFO     | pgrp: 3895675
[2026-05-14 02:28:35] 2026-05-14 00:27:55,973 | INFO     | corecount: 12
[2026-05-14 02:28:35] 2026-05-14 00:27:55,973 | INFO     | event service: False
[2026-05-14 02:28:35] 2026-05-14 00:27:55,973 | INFO     | sizes: {0: 2267502, 10: 2267502, 18: 2295091, 136: 2295229}
[2026-05-14 02:28:35] 2026-05-14 00:27:55,973 | INFO     | --------------------------------------------------
[2026-05-14 02:28:35] 2026-05-14 00:27:55,973 | INFO     | 
[2026-05-14 02:28:35] 2026-05-14 00:27:55,973 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/0
[2026-05-14 02:28:35] 2026-05-14 00:27:55,984 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | job 7138081482 has completed (purged errors)
[2026-05-14 02:28:35] 2026-05-14 00:27:55,985 | INFO     | overall cleanup function is called
[2026-05-14 02:28:35] 2026-05-14 00:27:56,991 | INFO     | --- collectZombieJob: --- 10, [3895675]
[2026-05-14 02:28:35] 2026-05-14 00:27:56,991 | INFO     | zombie collector waiting for pid 3895675
[2026-05-14 02:28:35] 2026-05-14 00:27:56,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 02:28:35] 2026-05-14 00:27:56,992 | INFO     | collected zombie processes
[2026-05-14 02:28:35] 2026-05-14 00:27:56,992 | INFO     | will attempt to kill all subprocesses of pid=3895675
[2026-05-14 02:28:35] 2026-05-14 00:27:57,099 | INFO     | process IDs to be killed: [3895675] (in reverse order)
[2026-05-14 02:28:35] 2026-05-14 00:27:57,161 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 02:28:35] 2026-05-14 00:27:57,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 02:28:35] 2026-05-14 00:27:57,171 | INFO     | did not find any defunct processes belonging to 3895675
[2026-05-14 02:28:35] 2026-05-14 00:27:57,176 | INFO     | did not find any defunct processes belonging to 3895675
[2026-05-14 02:28:35] 2026-05-14 00:27:57,176 | INFO     | Ready for new job
[2026-05-14 02:28:35] 2026-05-14 00:27:57,176 | INFO     | ***************************************
[2026-05-14 02:28:35] 2026-05-14 00:27:57,176 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 02:28:35] 2026-05-14 00:27:57,177 | INFO     | ***************************************
[2026-05-14 02:28:35] 2026-05-14 00:27:57,177 | INFO     | 
[2026-05-14 02:28:35] 2026-05-14 00:27:57,179 | INFO     | architecture information:
[2026-05-14 02:28:35] 2026-05-14 00:27:57,179 | INFO     | executing command: cat /etc/os-release
[2026-05-14 02:28:35] 2026-05-14 00:27:57,187 | INFO     | cat /etc/os-release:
[2026-05-14 02:28:35] NAME="CentOS Linux"
[2026-05-14 02:28:35] VERSION="7 (Core)"
[2026-05-14 02:28:35] ID="centos"
[2026-05-14 02:28:35] ID_LIKE="rhel fedora"
[2026-05-14 02:28:35] VERSION_ID="7"
[2026-05-14 02:28:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 02:28:35] ANSI_COLOR="0;31"
[2026-05-14 02:28:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 02:28:35] HOME_URL="https://www.centos.org/"
[2026-05-14 02:28:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 02:28:35] 
[2026-05-14 02:28:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 02:28:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 02:28:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 02:28:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 02:28:35] 
[2026-05-14 02:28:35] 2026-05-14 00:27:57,188 | INFO     | ***************************************
[2026-05-14 02:28:35] 2026-05-14 00:27:57,690 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/0
[2026-05-14 02:28:35] 2026-05-14 00:27:57,700 | INFO     | sufficient remaining disk space (181463416832 B)
[2026-05-14 02:28:35] 2026-05-14 00:27:57,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 02:28:35] 2026-05-14 00:27:57,701 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 02:28:35] 2026-05-14 00:27:57,701 | INFO     | update_server=False
[2026-05-14 02:28:35] 2026-05-14 00:27:57,701 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 02:28:35] 2026-05-14 00:27:57,701 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 02:28:35] 2026-05-14 00:27:57,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 02:28:35] 2026-05-14 00:27:57,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 02:28:35] 2026-05-14 00:27:57,701 | INFO     | aborting loop
[2026-05-14 02:28:35] 2026-05-14 00:27:58,266 | INFO     | all payload control threads have been joined
[2026-05-14 02:28:35] 2026-05-14 00:27:58,299 | INFO     | all data control threads have been joined
[2026-05-14 02:28:35] 2026-05-14 00:27:58,706 | INFO     | [job] retrieve thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:58,707 | INFO     | [job] queue monitor thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:58,707 | INFO     | [job] job monitor thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:58,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 02:28:35] 2026-05-14 00:27:59,022 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:59,068 | INFO     | [payload] failed_post thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:59,228 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:59,271 | INFO     | [payload] control thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:59,296 | INFO     | [payload] validate_post thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:59,305 | INFO     | [data] control thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:59,390 | INFO     | all job control threads have been joined
[2026-05-14 02:28:35] 2026-05-14 00:27:59,554 | INFO     | [job] validate thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:59,598 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:59,636 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:27:59,713 | INFO     | [data] copytool_in thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:28:00,396 | INFO     | [job] control thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:28:00,997 | INFO     | [data] copytool_out thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:28:01,707 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 02:28:35] 2026-05-14 00:28:28,705 | INFO     | PID=3881691 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 02:28:35] 2026-05-14 00:28:28,705 | INFO     | .. there are 8 such processes running
[2026-05-14 02:28:35] 2026-05-14 00:28:28,707 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 02:28:35] 2026-05-14 00:28:28,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 02:28:35] 2026-05-14 00:28:28,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 02:28:35] 2026-05-14 00:28:29,504 | INFO     | [monitor] cgroup control has ended
[2026-05-14 02:28:35] 2026-05-14 00:28:29,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22724203358016)>', '<ExcThread(monitor, started 22723968648960)>']
[2026-05-14 02:28:35] 2026-05-14 00:28:30,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 02:28:35] 2026-05-14 00:28:30,717 | INFO     | [monitor] control thread has ended
[2026-05-14 02:28:35] 2026-05-14 00:28:34,902 | INFO     | all workflow threads have been joined
[2026-05-14 02:28:35] 2026-05-14 00:28:34,902 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 02:28:35] 2026-05-14 00:28:34,902 | INFO     | traces error code: 0
[2026-05-14 02:28:35] 2026-05-14 00:28:34,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 02:28:35] 2026-05-14 00:28:34,956 [wrapper] ==== pilot stdout END ====
[2026-05-14 02:28:35] 2026-05-14 00:28:34,958 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 02:28:35] 2026-05-14 00:28:34,960 [wrapper] pilotpid: 3881691
[2026-05-14 02:28:35] 2026-05-14 00:28:34,961 [wrapper] Pilot exit status: 0
[2026-05-14 02:28:35] 2026-05-14 00:28:34,966 [wrapper] pandaids: 7138081482
[2026-05-14 02:28:35] 2026-05-14 00:28:35,007 [wrapper] cleanup supervisor_pilot 3881697 3881692
[2026-05-14 02:28:35] 2026-05-14 00:28:35,009 [wrapper] Test setup, not cleaning
[2026-05-14 02:28:35] 2026-05-14 00:28:35,011 [wrapper] apfmon messages muted
[2026-05-14 02:28:35] 2026-05-14 00:28:35,013 [wrapper] ==== wrapper stdout END ====
[2026-05-14 02:28:35] 2026-05-14 00:28:35,014 [wrapper] ==== wrapper stderr END ====
[2026-05-14 02:28:35]  *** Error codes and diagnostics ***
[2026-05-14 02:28:35]     "exeErrorCode": 65,
[2026-05-14 02:28:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 02:28:35]     "pilotErrorCode": 1305,
[2026-05-14 02:28:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 02:28:35]  *** Listing of results directory ***
[2026-05-14 02:28:35] total 263804
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc    683926 May 13 16:49 pilot3.tar.gz
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc      5631 May 13 16:51 queuedata.json
[2026-05-14 02:28:35] -rwx------. 1 boinc boinc     36281 May 13 16:51 runpilot2-wrapper.sh
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc       100 May 14 02:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 02:28:35] -rwxr-xr-x. 1 boinc boinc      7986 May 14 02:25 run_atlas
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc       105 May 14 02:25 job.xml
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc      6630 May 14 02:25 init_data.xml
[2026-05-14 02:28:35] -rw-r--r--. 2 boinc boinc 265821987 May 14 02:25 EVNT.50238180._000001.pool.root.1
[2026-05-14 02:28:35] -rw-r--r--. 2 boinc boinc     15667 May 14 02:25 start_atlas.sh
[2026-05-14 02:28:35] drwxrwx--x. 2 boinc boinc      4096 May 14 02:25 shared
[2026-05-14 02:28:35] -rw-r--r--. 2 boinc boinc    697433 May 14 02:25 input.tar.gz
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc         0 May 14 02:25 boinc_lockfile
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc      2556 May 14 02:25 pandaJob.out
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc    997597 May 14 02:25 agis_schedconf.cvmfs.json
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc   1502367 May 14 02:25 agis_ddmendpoints.agis.ALL.json
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc       439 May 14 02:25 workernode_map.json
[2026-05-14 02:28:35] drwx------. 5 boinc boinc      4096 May 14 02:25 pilot3
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc       479 May 14 02:25 boinc_task_state.xml
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc       969 May 14 02:25 memory_monitor_summary.json
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc     21017 May 14 02:25 log.50250204._000013.job.log.tgz.1
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc      7039 May 14 02:27 heartbeat_new.json
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc      7001 May 14 02:27 heartbeat.json
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc        95 May 14 02:28 pilot_heartbeat.json
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc      8192 May 14 02:28 boinc_mmap_file
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc        22 May 14 02:28 wrapper_checkpoint.txt
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc      4833 May 14 02:28 pilotlog.txt
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc     76165 May 14 02:28 log.50250204._000013.job.log.1
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc       188 May 14 02:28 output.list
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc       410 May 14 02:28 runtime_log
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc    112640 May 14 02:28 result.tar.gz
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc      8693 May 14 02:28 runtime_log.err
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc       645 May 14 02:28 900878a2f4f2.diag
[2026-05-14 02:28:35] -rw-r--r--. 1 boinc boinc     21411 May 14 02:28 stderr.txt
[2026-05-14 02:28:35] No HITS result produced
[2026-05-14 02:28:35]  *** Contents of shared directory: ***
[2026-05-14 02:28:35] total 260408
[2026-05-14 02:28:35] -rw-r--r--. 2 boinc boinc 265821987 May 14 02:25 ATLAS.root_0
[2026-05-14 02:28:35] -rw-r--r--. 2 boinc boinc     15667 May 14 02:25 start_atlas.sh
[2026-05-14 02:28:35] -rw-r--r--. 2 boinc boinc    697433 May 14 02:25 input.tar.gz
[2026-05-14 02:28:35] -rw-------. 1 boinc boinc    112640 May 14 02:28 result.tar.gz
02:28:36 (3877211): run_atlas exited; CPU time 8.447348
02:28:36 (3877211): called boinc_finish(0)

</stderr_txt>
]]>

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