Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-13 10:58:30 (7948): vboxwrapper version 26210
2026-05-13 10:58:30 (7948): BOINC client version: 8.2.9
2026-05-13 10:58:33 (7948): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-05-13 10:58:33 (7948): Successfully copied 'init_data.xml' to the shared directory.
2026-05-13 10:58:33 (7948): Create VM. (boinc_688720e216590696, slot#0)
2026-05-13 10:58:34 (7948): Setting Memory Size for VM. (4200MB)
2026-05-13 10:58:35 (7948): Setting CPU Count for VM. (2)
2026-05-13 10:58:35 (7948): Setting Chipset Options for VM.
2026-05-13 10:58:35 (7948): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-13 10:58:35 (7948): Setting Boot Options for VM.
2026-05-13 10:58:36 (7948): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-13 10:58:36 (7948): Enabling VM Network Access.
2026-05-13 10:58:37 (7948): Disabling USB Support for VM.
2026-05-13 10:58:37 (7948): Disabling COM Port Support for VM.
2026-05-13 10:58:37 (7948): Disabling LPT Port Support for VM.
2026-05-13 10:58:37 (7948): Disabling Audio Support for VM.
2026-05-13 10:58:38 (7948): Disabling Clipboard Support for VM.
2026-05-13 10:58:38 (7948): Disabling Drag and Drop Support for VM.
2026-05-13 10:58:38 (7948): Adding storage controller(s) to VM.
2026-05-13 10:58:38 (7948): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-13 10:58:41 (7948): Adding VirtualBox Guest Additions to VM.
2026-05-13 10:58:41 (7948): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-13 10:58:42 (7948): forwarding host port 55667 to guest port 80
2026-05-13 10:58:42 (7948): Enabling remote desktop for VM.
2026-05-13 10:58:42 (7948): Enabling shared directory for VM.
2026-05-13 10:58:43 (7948): Starting VM using VBoxManage interface. (boinc_688720e216590696, slot#0)
2026-05-13 10:58:52 (7948): Successfully started VM. (PID = '12872')
2026-05-13 10:58:52 (7948): Reporting VM Process ID to BOINC.
2026-05-13 10:58:52 (7948): Guest Log: BIOS: VirtualBox 7.0.6
2026-05-13 10:58:52 (7948): Guest Log: CPUID EDX: 0x178bfbff
2026-05-13 10:58:52 (7948): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-13 10:58:52 (7948): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-13 10:58:52 (7948): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-13 10:58:52 (7948): Detected: Web Application Enabled (http://localhost:55667)
2026-05-13 10:58:52 (7948): Detected: Remote Desktop Enabled (localhost:55673)
2026-05-13 10:58:52 (7948): Preference change detected
2026-05-13 10:58:52 (7948): Setting CPU throttle for VM. (100%)
2026-05-13 10:58:52 (7948): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 420 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-13 10:58:54 (7948): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-13 10:58:54 (7948): Guest Log: BIOS: Booting from Hard Disk...
2026-05-13 10:58:58 (7948): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-13 10:58:58 (7948): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-13 10:58:58 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-13 10:59:10 (7948): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-13 10:59:10 (7948): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-13 10:59:54 (7948): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-13 10:59:54 (7948): Guest Log: 00:00:00.000992 main     Log opened 2026-05-13T10:59:52.707144000Z
2026-05-13 10:59:54 (7948): Guest Log: 00:00:00.001399 main     OS Product: Linux
2026-05-13 10:59:54 (7948): Guest Log: 00:00:00.001578 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-13 10:59:54 (7948): Guest Log: 00:00:00.001826 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-13 10:59:54 (7948): Guest Log: 00:00:00.001966 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-13 10:59:54 (7948): Guest Log: 00:00:00.001970 main     Process ID: 1268
2026-05-13 10:59:54 (7948): Guest Log: 00:00:00.001973 main     Package type: LINUX_64BITS_GENERIC
2026-05-13 10:59:54 (7948): Guest Log: 00:00:00.006612 main     5.2.32 r132073 started. Verbose level = 0
2026-05-13 10:59:55 (7948): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-13 10:59:55 (7948): Guest Log: [INFO] Mounting shared directory
2026-05-13 10:59:55 (7948): Guest Log: [INFO] Checking for init_data.xml
2026-05-13 11:00:04 (7948): Guest Log: 00:00:10.028372 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 136 318 000ns (GuestNow=1 778 684 403 859 731 000 ns GuestLast=1 778 669 992 723 413 000 ns fSetTimeLastLoop=true )
2026-05-13 11:01:37 (7948): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-13 11:01:37 (7948): Guest Log: [INFO] Detected branch: prod
2026-05-13 11:01:37 (7948): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-13 11:01:37 (7948): Guest Log: Copying input files
2026-05-13 11:01:38 (7948): Guest Log: Copied input files into RunAtlas.
2026-05-13 11:01:38 (7948): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-13 11:01:38 (7948): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-13 11:01:38 (7948): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-13 11:01:38 (7948): Guest Log: Further information can be found at the LHC@home message board.
2026-05-13 11:02:50 (7948): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-13 11:02:50 (7948): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-13 11:02:50 (7948): Guest Log: 2.6.3.0 1593 1 30120 159488 4 1 3117650 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-13 11:02:54 (7948): Guest Log: copied the webapp to /var/www
2026-05-13 11:02:54 (7948): Guest Log: ATHENA_PROC_NUMBER=2
2026-05-13 11:02:54 (7948): Guest Log: ATHENA_CORE_NUMBER=2
2026-05-13 11:02:55 (7948): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-13 11:02:55 (7948): Guest Log:  *** Starting ATLAS job. (PandaID=7138069073 taskID=50250192) ***
2026-05-13 11:09:43 (7948): Guest Log:  *** Job finished ***
2026-05-13 11:09:43 (7948): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:17,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:17,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:37,529 | INFO     | [monitor] cgroup control has ended
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:37,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140634018613056)>', '<ExcThread(monitor, started 140633570260736)>']
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:38,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:38,832 | INFO     | [monitor] control thread has ended
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:42,969 | INFO     | all workflow threads have been joined
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:42,969 | INFO     | end of generic workflow (traces error code: 0)
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:42,969 | INFO     | traces error code: 0
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:42,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:43,119 [wrapper] ==== pilot stdout END ====
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:43,130 [wrapper] ==== wrapper stdout RESUME ====
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:43,144 [wrapper] pilotpid: 5960
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:43,151 [wrapper] Pilot exit status: 0
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:43,275 [wrapper] pandaids: 7138069073
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:43,334 [wrapper] cleanup supervisor_pilot  5966 5961
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:43,342 [wrapper] Test setup, not cleaning
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:43,349 [wrapper] apfmon messages muted
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:43,356 [wrapper] ==== wrapper stdout END ====
2026-05-13 11:09:43 (7948): Guest Log: 2026-05-13 15:09:43,370 [wrapper] ==== wrapper stderr END ====
2026-05-13 11:09:43 (7948): Guest Log:  *** Error codes and diagnostics ***
2026-05-13 11:09:43 (7948): Guest Log:     "exeErrorCode": 65,
2026-05-13 11:09:43 (7948): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2026-05-13 11:09:43 (7948): Guest Log:     "pilotErrorCode": 1305,
2026-05-13 11:09:43 (7948): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2026-05-13 11:09:43 (7948): Guest Log:  *** Listing of results directory ***
2026-05-13 11:09:43 (7948): Guest Log: total 4156
2026-05-13 11:09:43 (7948): Guest Log: -rw-r--r--. 1 atlas atlas  683926 May 13 10:02 pilot3.tar.gz
2026-05-13 11:09:43 (7948): Guest Log: -rwx------. 1 atlas atlas   36281 May 13 10:15 runpilot2-wrapper.sh
2026-05-13 11:09:43 (7948): Guest Log: -rw-r--r--. 1 atlas atlas    5631 May 13 10:16 queuedata.json
2026-05-13 11:09:43 (7948): Guest Log: -rwxr-xr-x. 1 atlas atlas    8065 May 13 15:01 init_data.xml
2026-05-13 11:09:43 (7948): Guest Log: -rwxr-xr-x. 1 atlas atlas  697435 May 13 15:01 input.tar.gz
2026-05-13 11:09:43 (7948): Guest Log: -rwxr-xr-x. 1 atlas atlas   15667 May 13 15:01 start_atlas.sh
2026-05-13 11:09:43 (7948): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 13 15:01 EVNT.50238157._000272.pool.root.1 -> /data/./ATLAS.root_0
2026-05-13 11:09:43 (7948): Guest Log: -rw-r--r--. 1 atlas atlas    2560 May 13 15:02 pandaJob.out
2026-05-13 11:09:43 (7948): Guest Log: -rw-------. 1 atlas atlas  997866 May 13 15:04 agis_schedconf.cvmfs.json
2026-05-13 11:09:43 (7948): Guest Log: -rw-------. 1 atlas atlas 1502367 May 13 15:04 agis_ddmendpoints.agis.ALL.json
2026-05-13 11:09:43 (7948): Guest Log: -rw-------. 1 atlas atlas     427 May 13 15:04 workernode_map.json
2026-05-13 11:09:43 (7948): Guest Log: drwx------. 5 atlas atlas    4096 May 13 15:04 pilot3
2026-05-13 11:09:43 (7948): Guest Log: -rw-------. 1 atlas atlas    1005 May 13 15:06 memory_monitor_summary.json
2026-05-13 11:09:43 (7948): Guest Log: -rw-------. 1 atlas atlas   21267 May 13 15:06 log.50250192._006787.job.log.tgz.1
2026-05-13 11:09:43 (7948): Guest Log: -rw-------. 1 atlas atlas    7116 May 13 15:08 heartbeat_new.json
2026-05-13 11:09:43 (7948): Guest Log: -rw-------. 1 atlas atlas    7078 May 13 15:08 heartbeat.json
2026-05-13 11:09:43 (7948): Guest Log: -rw-------. 1 atlas atlas      95 May 13 15:09 pilot_heartbeat.json
2026-05-13 11:09:43 (7948): Guest Log: -rw-------. 1 atlas atlas    4804 May 13 15:09 pilotlog.txt
2026-05-13 11:09:44 (7948): Guest Log: -rw-------. 1 atlas atlas   79588 May 13 15:09 log.50250192._006787.job.log.1
2026-05-13 11:09:44 (7948): Guest Log: -rw-------. 1 atlas atlas     188 May 13 15:09 output.list
2026-05-13 11:09:44 (7948): Guest Log: -rw-r--r--. 1 atlas atlas     410 May 13 15:09 runtime_log
2026-05-13 11:09:44 (7948): Guest Log: -rw-------. 1 atlas atlas  122880 May 13 15:09 result.tar.gz
2026-05-13 11:09:44 (7948): Guest Log: -rw-------. 1 atlas atlas     654 May 13 15:09 4f48f7ccfe8e.diag
2026-05-13 11:09:44 (7948): Guest Log: -rw-r--r--. 1 atlas atlas    8254 May 13 15:09 runtime_log.err
2026-05-13 11:09:44 (7948): Guest Log: Looking for outputfile HITS.50250192._006787.pool.root.1
2026-05-13 11:09:44 (7948): Guest Log: No HITS file was produced
2026-05-13 11:09:44 (7948): Guest Log: Successfully finished the ATLAS job!
2026-05-13 11:09:44 (7948): Guest Log: Copying the results back to the shared directory!
2026-05-13 11:09:44 (7948): Guest Log:  *** Contents of shared directory: ***
2026-05-13 11:09:44 (7948): Guest Log: total 102552
2026-05-13 11:09:44 (7948): Guest Log: -rwxrwxrwx. 1 root root 104163368 May 13 14:58 ATLAS.root_0
2026-05-13 11:09:44 (7948): Guest Log: -rwxrwxrwx. 1 root root      8065 May 13 14:58 init_data.xml
2026-05-13 11:09:44 (7948): Guest Log: -rwxrwxrwx. 1 root root    697435 May 13 14:58 input.tar.gz
2026-05-13 11:09:44 (7948): Guest Log: -rwxrwxrwx. 1 root root    122880 May 13 15:09 result.tar.gz
2026-05-13 11:09:44 (7948): Guest Log: -rwxrwxrwx. 1 root root     15667 May 13 14:58 start_atlas.sh
2026-05-13 11:09:44 (7948): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-13 11:09:44 (7948): VM Completion File Detected.
2026-05-13 11:09:44 (7948): Powering off VM.
2026-05-13 11:09:44 (7948): Successfully stopped VM.
2026-05-13 11:09:44 (7948): Deregistering VM. (boinc_688720e216590696, slot#0)
2026-05-13 11:09:44 (7948): Removing network bandwidth throttle group from VM.
2026-05-13 11:09:45 (7948): Removing VM from VirtualBox.
2026-05-13 11:09:50 (7948): called boinc_finish(0)

</stderr_txt>
]]>

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