Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
17:01:16 (20720): wrapper (7.7.26015): starting
17:01:16 (20720): wrapper: running run_atlas (--nthreads 8)
[2026-05-13 17:01:16] Arguments: --nthreads 8
[2026-05-13 17:01:16] Threads: 8
[2026-05-13 17:01:16] Checking for CVMFS
[2026-05-13 17:01:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 17:01:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 17:01:17] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 17:01:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 17:01:17] 2.11.0.0 6650 1652 54976 159488 0 186 1171979 4096001 476 130560 0 622425 99.704 408773 1189 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-05-13 17:01:17] CVMFS is ok
[2026-05-13 17:01:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 17:01:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 17:01:17] Further information can be found at the LHC@home message board.
[2026-05-13 17:01:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 17:01:17] Checking for apptainer binary...
[2026-05-13 17:01:17] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-05-13 17:01:17] apptainer is not installed, using version from CVMFS
[2026-05-13 17:01:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 17:01:17] WARNING: Environment variable TMPDIR already has value [/tmp/job_11605583/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node401
[2026-05-13 17:01:17] apptainer works
[2026-05-13 17:01:17] Set ATHENA_PROC_NUMBER=8
[2026-05-13 17:01:17] Set ATHENA_CORE_NUMBER=8
[2026-05-13 17:01:17] Starting ATLAS job with PandaID=7138060474
[2026-05-13 17:01:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11605583/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 17:04:30]  *** The last 200 lines of the pilot log: ***
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | found no stored workdir sizes
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | wrong length of table data, x=[1778684501.0], y=[7336.0] (must be same and length>=4)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | could have reported an average CPU frequency of 2426 MHz (4 samples)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | ..............................
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | . Timing measurements:
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . get job = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . initial setup = 2 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . payload setup = 3 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . stage-in = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . payload execution = 12 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . stage-out = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . log creation = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | ..............................
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | executing command: tail -n 20 /tmp/job_11605583/atlas/pilot/slots/0/PanDA_Pilot-7138060474/pilotlog.txt
[2026-05-13 17:04:30] 2026-05-13 15:03:54,838 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 17:04:30] - Log from pilotlog.txt -
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | extracted standard info from prmon json
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | found no stored workdir sizes
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | wrong length of table data, x=[1778684501.0], y=[7336.0] (must be same and length>=4)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | could have reported an average CPU frequency of 2426 MHz (4 samples)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | ..............................
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | . Timing measurements:
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . get job = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . initial setup = 2 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . payload setup = 3 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . stage-in = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . payload execution = 12 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . stage-out = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . log creation = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | ..............................
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | executing command: tail -n 20 /tmp/job_11605583/atlas/pilot/slots/0/PanDA_Pilot-7138060474/pilotlog.txt
[2026-05-13 17:04:30] 2026-05-13 15:03:54,838 | WARNING  | 
[2026-05-13 17:04:30] [begin log extracts]
[2026-05-13 17:04:30] - Log from pilotlog.txt -
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | extracted standard info from prmon json
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | found no stored workdir sizes
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | WARNING  | wrong length of table data, x=[1778684501.0], y=[7336.0] (must be same and length>=4)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | could have reported an average CPU frequency of 2426 MHz (4 samples)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | ..............................
[2026-05-13 17:04:30] 2026-05-13 15:03:54,830 | INFO     | . Timing measurements:
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . get job = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . initial setup = 2 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . payload setup = 3 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . stage-in = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . payload execution = 12 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . stage-out = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | . log creation = 0 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | ..............................
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 17:04:30] 2026-05-13 15:03:54,831 | INFO     | executing command: tail -n 20 /tmp/job_11605583/atlas/pilot/slots/0/PanDA_Pilot-7138060474/pilotlog.txt
[2026-05-13 17:04:30] [end log extracts]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,838 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,839 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | 
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | job summary report
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | --------------------------------------------------
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | PanDA job id: 7138060474
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | task id: 50250192
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-13 17:01:47,479 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | pilot state: failed 
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | transexitcode: 65
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | exeerrorcode: 65
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | exitcode: 65
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | cpuconsumptiontime: 9 s
[2026-05-13 17:04:30] 2026-05-13 15:03:54,887 | INFO     | nevents: 0
[2026-05-13 17:04:30] 2026-05-13 15:03:54,888 | INFO     | neventsw: 0
[2026-05-13 17:04:30] 2026-05-13 15:03:54,888 | INFO     | pid: 13058
[2026-05-13 17:04:30] 2026-05-13 15:03:54,888 | INFO     | pgrp: 13058
[2026-05-13 17:04:30] 2026-05-13 15:03:54,888 | INFO     | corecount: 8
[2026-05-13 17:04:30] 2026-05-13 15:03:54,888 | INFO     | event service: False
[2026-05-13 17:04:30] 2026-05-13 15:03:54,888 | INFO     | sizes: {0: 2267627, 11: 2267627, 18: 2290959, 20: 2295269, 22: 2295297, 139: 2295463}
[2026-05-13 17:04:30] 2026-05-13 15:03:54,888 | INFO     | --------------------------------------------------
[2026-05-13 17:04:30] 2026-05-13 15:03:54,888 | INFO     | 
[2026-05-13 17:04:30] 2026-05-13 15:03:54,888 | INFO     | executing command: ls -lF /tmp/job_11605583/atlas/pilot/slots/0
[2026-05-13 17:04:30] 2026-05-13 15:03:54,897 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,897 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,897 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,897 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | job 7138060474 has completed (purged errors)
[2026-05-13 17:04:30] 2026-05-13 15:03:54,898 | INFO     | overall cleanup function is called
[2026-05-13 17:04:30] 2026-05-13 15:03:55,903 | INFO     | --- collectZombieJob: --- 10, [13058]
[2026-05-13 17:04:30] 2026-05-13 15:03:55,904 | INFO     | zombie collector waiting for pid 13058
[2026-05-13 17:04:30] 2026-05-13 15:03:55,904 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 17:04:30] 2026-05-13 15:03:55,904 | INFO     | collected zombie processes
[2026-05-13 17:04:30] 2026-05-13 15:03:55,904 | INFO     | will attempt to kill all subprocesses of pid=13058
[2026-05-13 17:04:30] 2026-05-13 15:03:55,984 | INFO     | process IDs to be killed: [13058] (in reverse order)
[2026-05-13 17:04:30] 2026-05-13 15:03:56,020 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 17:04:30] 2026-05-13 15:03:56,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 17:04:30] 2026-05-13 15:03:56,024 | INFO     | did not find any defunct processes belonging to 13058
[2026-05-13 17:04:30] 2026-05-13 15:03:56,027 | INFO     | did not find any defunct processes belonging to 13058
[2026-05-13 17:04:30] 2026-05-13 15:03:56,027 | INFO     | Ready for new job
[2026-05-13 17:04:30] 2026-05-13 15:03:56,028 | INFO     | ***************************************
[2026-05-13 17:04:30] 2026-05-13 15:03:56,028 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 17:04:30] 2026-05-13 15:03:56,028 | INFO     | ***************************************
[2026-05-13 17:04:30] 2026-05-13 15:03:56,028 | INFO     | 
[2026-05-13 17:04:30] 2026-05-13 15:03:56,042 | INFO     | architecture information:
[2026-05-13 17:04:30] 2026-05-13 15:03:56,042 | INFO     | executing command: cat /etc/os-release
[2026-05-13 17:04:30] 2026-05-13 15:03:56,048 | INFO     | cat /etc/os-release:
[2026-05-13 17:04:30] NAME="CentOS Linux"
[2026-05-13 17:04:30] VERSION="7 (Core)"
[2026-05-13 17:04:30] ID="centos"
[2026-05-13 17:04:30] ID_LIKE="rhel fedora"
[2026-05-13 17:04:30] VERSION_ID="7"
[2026-05-13 17:04:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 17:04:30] ANSI_COLOR="0;31"
[2026-05-13 17:04:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 17:04:30] HOME_URL="https://www.centos.org/"
[2026-05-13 17:04:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 17:04:30] 
[2026-05-13 17:04:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 17:04:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 17:04:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 17:04:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 17:04:30] 
[2026-05-13 17:04:30] 2026-05-13 15:03:56,048 | INFO     | ***************************************
[2026-05-13 17:04:30] 2026-05-13 15:03:56,551 | INFO     | executing command: df -mP /tmp/job_11605583/atlas/pilot/slots/0
[2026-05-13 17:04:30] 2026-05-13 15:03:56,558 | INFO     | sufficient remaining disk space (227561963520 B)
[2026-05-13 17:04:30] 2026-05-13 15:03:56,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 17:04:30] 2026-05-13 15:03:56,558 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 17:04:30] 2026-05-13 15:03:56,558 | INFO     | update_server=False
[2026-05-13 17:04:30] 2026-05-13 15:03:56,559 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 17:04:30] 2026-05-13 15:03:56,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 17:04:30] 2026-05-13 15:03:56,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 17:04:30] 2026-05-13 15:03:56,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 17:04:30] 2026-05-13 15:03:56,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 17:04:30] 2026-05-13 15:03:56,842 | INFO     | aborting loop
[2026-05-13 17:04:30] 2026-05-13 15:03:57,354 | INFO     | all data control threads have been joined
[2026-05-13 17:04:30] 2026-05-13 15:03:57,445 | INFO     | all payload control threads have been joined
[2026-05-13 17:04:30] 2026-05-13 15:03:57,468 | INFO     | all job control threads have been joined
[2026-05-13 17:04:30] 2026-05-13 15:03:57,564 | INFO     | [job] retrieve thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:57,564 | INFO     | [job] queue monitor thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:57,663 | INFO     | [data] copytool_in thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:57,847 | INFO     | [job] job monitor thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:58,283 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:58,359 | INFO     | [data] control thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:58,450 | INFO     | [payload] control thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:58,473 | INFO     | [job] control thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:58,553 | INFO     | [payload] failed_post thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:58,564 | INFO     | [data] copytool_out thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:58,576 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:58,768 | INFO     | [payload] validate_post thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:58,789 | INFO     | [job] validate thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:58,924 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:03:59,010 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:04:00,564 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 17:04:30] 2026-05-13 15:04:24,069 | INFO     | [monitor] cgroup control has ended
[2026-05-13 17:04:30] 2026-05-13 15:04:25,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456069543680)>']
[2026-05-13 17:04:30] 2026-05-13 15:04:27,202 | INFO     | PID=32525 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-13 17:04:30] 2026-05-13 15:04:27,202 | INFO     | .. there are 2 such processes running
[2026-05-13 17:04:30] 2026-05-13 15:04:27,203 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 17:04:30] 2026-05-13 15:04:27,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 17:04:30] 2026-05-13 15:04:27,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 17:04:30] 2026-05-13 15:04:27,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 17:04:30] 2026-05-13 15:04:27,203 | INFO     | [monitor] control thread has ended
[2026-05-13 17:04:30] 2026-05-13 15:04:30,069 | INFO     | all workflow threads have been joined
[2026-05-13 17:04:30] 2026-05-13 15:04:30,069 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 17:04:30] 2026-05-13 15:04:30,069 | INFO     | traces error code: 0
[2026-05-13 17:04:30] 2026-05-13 15:04:30,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 17:04:30] 2026-05-13 15:04:30,120 [wrapper] ==== pilot stdout END ====
[2026-05-13 17:04:30] 2026-05-13 15:04:30,122 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 17:04:30] 2026-05-13 15:04:30,123 [wrapper] pilotpid: 32525
[2026-05-13 17:04:30] 2026-05-13 15:04:30,124 [wrapper] Pilot exit status: 0
[2026-05-13 17:04:30] 2026-05-13 15:04:30,128 [wrapper] pandaids: 7138060474
[2026-05-13 17:04:30] 2026-05-13 15:04:30,150 [wrapper] cleanup supervisor_pilot 32532 32526
[2026-05-13 17:04:30] 2026-05-13 15:04:30,151 [wrapper] Test setup, not cleaning
[2026-05-13 17:04:30] 2026-05-13 15:04:30,153 [wrapper] apfmon messages muted
[2026-05-13 17:04:30] 2026-05-13 15:04:30,154 [wrapper] ==== wrapper stdout END ====
[2026-05-13 17:04:30] 2026-05-13 15:04:30,155 [wrapper] ==== wrapper stderr END ====
[2026-05-13 17:04:30]  *** Error codes and diagnostics ***
[2026-05-13 17:04:30]     "exeErrorCode": 65,
[2026-05-13 17:04:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 17:04:30]     "pilotErrorCode": 1305,
[2026-05-13 17:04:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 17:04:30]  *** Listing of results directory ***
[2026-05-13 17:04:30] total 105256
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user    683926 May 13 12:02 pilot3.tar.gz
[2026-05-13 17:04:30] -rwx------ 1 mf493845 unix-user     36281 May 13 12:14 runpilot2-wrapper.sh
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user      5631 May 13 12:15 queuedata.json
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user       100 May 13 16:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 17:04:30] -rwxr-xr-x 1 mf493845 unix-user      7986 May 13 16:34 run_atlas
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user       105 May 13 16:34 job.xml
[2026-05-13 17:04:30] -rw-r--r-- 2 mf493845 unix-user 103476451 May 13 17:01 EVNT.50238157._000150.pool.root.1
[2026-05-13 17:04:30] -rw-r--r-- 2 mf493845 unix-user     15667 May 13 17:01 start_atlas.sh
[2026-05-13 17:04:30] drwxrwx--x 2 mf493845 unix-user       100 May 13 17:01 shared
[2026-05-13 17:04:30] -rw-r--r-- 2 mf493845 unix-user    697435 May 13 17:01 input.tar.gz
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user      6308 May 13 17:01 init_data.xml
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user         0 May 13 17:01 boinc_setup_complete
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user      8192 May 13 17:01 boinc_mmap_file
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user         0 May 13 17:01 boinc_lockfile
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user      2560 May 13 17:01 pandaJob.out
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user    997866 May 13 17:01 agis_schedconf.cvmfs.json
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user   1502367 May 13 17:01 agis_ddmendpoints.agis.ALL.json
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user       416 May 13 17:01 workernode_map.json
[2026-05-13 17:04:30] drwx------ 5 mf493845 unix-user       520 May 13 17:01 pilot3
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user       943 May 13 17:01 memory_monitor_summary.json
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user     22487 May 13 17:01 log.50250192._003730.job.log.tgz.1
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user      6995 May 13 17:03 heartbeat_new.json
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user      6956 May 13 17:03 heartbeat.json
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user        95 May 13 17:04 pilot_heartbeat.json
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user      4834 May 13 17:04 pilotlog.txt
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user     82061 May 13 17:04 log.50250192._003730.job.log.1
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user       188 May 13 17:04 output.list
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user       410 May 13 17:04 runtime_log
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user    122880 May 13 17:04 result.tar.gz
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user      8689 May 13 17:04 runtime_log.err
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user       625 May 13 17:04 4effe14d9a2c.diag
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user     22101 May 13 17:04 stderr.txt
[2026-05-13 17:04:30] No HITS result produced
[2026-05-13 17:04:30]  *** Contents of shared directory: ***
[2026-05-13 17:04:30] total 101872
[2026-05-13 17:04:30] -rw-r--r-- 2 mf493845 unix-user 103476451 May 13 17:01 ATLAS.root_0
[2026-05-13 17:04:30] -rw-r--r-- 2 mf493845 unix-user     15667 May 13 17:01 start_atlas.sh
[2026-05-13 17:04:30] -rw-r--r-- 2 mf493845 unix-user    697435 May 13 17:01 input.tar.gz
[2026-05-13 17:04:30] -rw------- 1 mf493845 unix-user    122880 May 13 17:04 result.tar.gz
17:04:32 (20720): run_atlas exited; CPU time 11.719712
17:04:32 (20720): called boinc_finish(0)

</stderr_txt>
]]>

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