Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:25:29 (2998273): wrapper (7.7.26015): starting
09:25:29 (2998273): wrapper: running run_atlas (--nthreads 11)
[2026-05-13 09:25:29] Arguments: --nthreads 11
[2026-05-13 09:25:29] Threads: 11
[2026-05-13 09:25:29] Checking for CVMFS
[2026-05-13 09:25:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 09:25:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 09:25:30] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 09:25:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 09:25:30] 2.13.3.0 12079 18690 233652 159484 3 427 27395231 32935936 10362 16776704 0 45077341 99.533 85028640 37573 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-13 09:25:30] CVMFS is ok
[2026-05-13 09:25:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 09:25:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 09:25:30] Further information can be found at the LHC@home message board.
[2026-05-13 09:25:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 09:25:30] Checking for apptainer binary...
[2026-05-13 09:25:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-13 09:25:30] Running /usr/bin/apptainer --version
[2026-05-13 09:25:30] apptainer version 1.4.5-3.el9
[2026-05-13 09:25:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 09:25:30] c6-5-7-3.aglt2.org
[2026-05-13 09:25:30] apptainer works
[2026-05-13 09:25:30] Set ATHENA_PROC_NUMBER=11
[2026-05-13 09:25:30] Set ATHENA_CORE_NUMBER=11
[2026-05-13 09:25:30] Starting ATLAS job with PandaID=7138067849
[2026-05-13 09:25:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 09:30:22]  *** The last 200 lines of the pilot log: ***
[2026-05-13 09:30:22] 2026-05-13 13:29:49,901 | INFO     | extracted standard info from prmon json
[2026-05-13 09:30:22] 2026-05-13 13:29:49,901 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 09:30:22] 2026-05-13 13:29:49,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 09:30:22] 2026-05-13 13:29:49,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 09:30:22] 2026-05-13 13:29:49,903 | WARNING  | wrong length of table data, x=[1778678824.0], y=[1395.0] (must be same and length>=4)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,903 | INFO     | could have reported an average CPU frequency of 2777 MHz (4 samples)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,903 | INFO     | ..............................
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . Timing measurements:
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . get job = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . initial setup = 18 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . payload setup = 26 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . stage-in = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . payload execution = 57 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . stage-out = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . log creation = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | ..............................
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 09:30:22] 2026-05-13 13:29:49,905 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138067849/pilotlog.txt
[2026-05-13 09:30:22] 2026-05-13 13:29:49,922 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 09:30:22] - Log from pilotlog.txt -
[2026-05-13 09:30:22] 2026-05-13 13:29:49,888 | INFO     | payload/TRF did not report the number of read events
[2026-05-13 09:30:22] 2026-05-13 13:29:49,900 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7138067849/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,901 | INFO     | extracted standard info from prmon json
[2026-05-13 09:30:22] 2026-05-13 13:29:49,901 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 09:30:22] 2026-05-13 13:29:49,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 09:30:22] 2026-05-13 13:29:49,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 09:30:22] 2026-05-13 13:29:49,903 | WARNING  | wrong length of table data, x=[1778678824.0], y=[1395.0] (must be same and length>=4)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,903 | INFO     | could have reported an average CPU frequency of 2777 MHz (4 samples)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,903 | INFO     | ..............................
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . Timing measurements:
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . get job = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . initial setup = 18 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . payload setup = 26 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . stage-in = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . payload execution = 57 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . stage-out = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . log creation = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | ..............................
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 09:30:22] 2026-05-13 13:29:49,905 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138067849/pilotlog.txt
[2026-05-13 09:30:22] 2026-05-13 13:29:49,922 | WARNING  | 
[2026-05-13 09:30:22] [begin log extracts]
[2026-05-13 09:30:22] - Log from pilotlog.txt -
[2026-05-13 09:30:22] 2026-05-13 13:29:49,888 | INFO     | payload/TRF did not report the number of read events
[2026-05-13 09:30:22] 2026-05-13 13:29:49,900 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7138067849/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,901 | INFO     | extracted standard info from prmon json
[2026-05-13 09:30:22] 2026-05-13 13:29:49,901 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 09:30:22] 2026-05-13 13:29:49,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 09:30:22] 2026-05-13 13:29:49,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 09:30:22] 2026-05-13 13:29:49,903 | WARNING  | wrong length of table data, x=[1778678824.0], y=[1395.0] (must be same and length>=4)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,903 | INFO     | could have reported an average CPU frequency of 2777 MHz (4 samples)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,903 | INFO     | ..............................
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . Timing measurements:
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . get job = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . initial setup = 18 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . payload setup = 26 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . stage-in = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . payload execution = 57 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . stage-out = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | . log creation = 0 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | ..............................
[2026-05-13 09:30:22] 2026-05-13 13:29:49,904 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 09:30:22] 2026-05-13 13:29:49,905 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138067849/pilotlog.txt
[2026-05-13 09:30:22] [end log extracts]
[2026-05-13 09:30:22] 2026-05-13 13:29:49,922 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,923 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 09:30:22] 2026-05-13 13:29:49,995 | INFO     | 
[2026-05-13 09:30:22] 2026-05-13 13:29:49,995 | INFO     | job summary report
[2026-05-13 09:30:22] 2026-05-13 13:29:49,996 | INFO     | --------------------------------------------------
[2026-05-13 09:30:22] 2026-05-13 13:29:49,996 | INFO     | PanDA job id: 7138067849
[2026-05-13 09:30:22] 2026-05-13 13:29:49,996 | INFO     | task id: 50250192
[2026-05-13 09:30:22] 2026-05-13 13:29:49,996 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-13 13:27:42,264 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 09:30:22] 2026-05-13 13:29:49,996 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 09:30:22] 2026-05-13 13:29:49,996 | INFO     | pilot state: failed 
[2026-05-13 09:30:22] 2026-05-13 13:29:49,996 | INFO     | transexitcode: 65
[2026-05-13 09:30:22] 2026-05-13 13:29:49,996 | INFO     | exeerrorcode: 65
[2026-05-13 09:30:22] 2026-05-13 13:29:49,996 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,997 | INFO     | exitcode: 65
[2026-05-13 09:30:22] 2026-05-13 13:29:49,997 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 09:30:22] 2026-05-13 13:29:49,997 | INFO     | cpuconsumptiontime: 28 s
[2026-05-13 09:30:22] 2026-05-13 13:29:49,997 | INFO     | nevents: 0
[2026-05-13 09:30:22] 2026-05-13 13:29:49,997 | INFO     | neventsw: 0
[2026-05-13 09:30:22] 2026-05-13 13:29:49,997 | INFO     | pid: 3016248
[2026-05-13 09:30:22] 2026-05-13 13:29:49,997 | INFO     | pgrp: 3016248
[2026-05-13 09:30:22] 2026-05-13 13:29:49,997 | INFO     | corecount: 11
[2026-05-13 09:30:22] 2026-05-13 13:29:49,998 | INFO     | event service: False
[2026-05-13 09:30:22] 2026-05-13 13:29:49,998 | INFO     | sizes: {0: 2265043, 1: 2267529, 12: 2267529, 88: 2290912, 90: 2295235, 207: 2295373}
[2026-05-13 09:30:22] 2026-05-13 13:29:49,998 | INFO     | --------------------------------------------------
[2026-05-13 09:30:22] 2026-05-13 13:29:49,998 | INFO     | 
[2026-05-13 09:30:22] 2026-05-13 13:29:49,998 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-13 09:30:22] 2026-05-13 13:29:50,019 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,020 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,020 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,020 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,020 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,021 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,021 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,021 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,021 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | job 7138067849 has completed (purged errors)
[2026-05-13 09:30:22] 2026-05-13 13:29:50,022 | INFO     | overall cleanup function is called
[2026-05-13 09:30:22] 2026-05-13 13:29:51,028 | INFO     | --- collectZombieJob: --- 10, [3016248]
[2026-05-13 09:30:22] 2026-05-13 13:29:51,029 | INFO     | zombie collector waiting for pid 3016248
[2026-05-13 09:30:22] 2026-05-13 13:29:51,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 09:30:22] 2026-05-13 13:29:51,029 | INFO     | collected zombie processes
[2026-05-13 09:30:22] 2026-05-13 13:29:51,029 | INFO     | will attempt to kill all subprocesses of pid=3016248
[2026-05-13 09:30:22] 2026-05-13 13:29:51,178 | INFO     | process IDs to be killed: [3016248] (in reverse order)
[2026-05-13 09:30:22] 2026-05-13 13:29:51,245 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 09:30:22] 2026-05-13 13:29:51,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 09:30:22] 2026-05-13 13:29:51,255 | INFO     | did not find any defunct processes belonging to 3016248
[2026-05-13 09:30:22] 2026-05-13 13:29:51,263 | INFO     | did not find any defunct processes belonging to 3016248
[2026-05-13 09:30:22] 2026-05-13 13:29:51,263 | INFO     | Ready for new job
[2026-05-13 09:30:22] 2026-05-13 13:29:51,265 | INFO     | ***************************************
[2026-05-13 09:30:22] 2026-05-13 13:29:51,265 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 09:30:22] 2026-05-13 13:29:51,265 | INFO     | ***************************************
[2026-05-13 09:30:22] 2026-05-13 13:29:51,265 | INFO     | 
[2026-05-13 09:30:22] 2026-05-13 13:29:51,267 | INFO     | architecture information:
[2026-05-13 09:30:22] 2026-05-13 13:29:51,268 | INFO     | executing command: cat /etc/os-release
[2026-05-13 09:30:22] 2026-05-13 13:29:51,286 | INFO     | cat /etc/os-release:
[2026-05-13 09:30:22] NAME="CentOS Linux"
[2026-05-13 09:30:22] VERSION="7 (Core)"
[2026-05-13 09:30:22] ID="centos"
[2026-05-13 09:30:22] ID_LIKE="rhel fedora"
[2026-05-13 09:30:22] VERSION_ID="7"
[2026-05-13 09:30:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 09:30:22] ANSI_COLOR="0;31"
[2026-05-13 09:30:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 09:30:22] HOME_URL="https://www.centos.org/"
[2026-05-13 09:30:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 09:30:22] 
[2026-05-13 09:30:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 09:30:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 09:30:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 09:30:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 09:30:22] 
[2026-05-13 09:30:22] 2026-05-13 13:29:51,286 | INFO     | ***************************************
[2026-05-13 09:30:22] 2026-05-13 13:29:51,788 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-13 09:30:22] 2026-05-13 13:29:51,803 | INFO     | sufficient remaining disk space (76612108288 B)
[2026-05-13 09:30:22] 2026-05-13 13:29:51,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 09:30:22] 2026-05-13 13:29:51,804 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 09:30:22] 2026-05-13 13:29:51,804 | INFO     | update_server=False
[2026-05-13 09:30:22] 2026-05-13 13:29:51,804 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 09:30:22] 2026-05-13 13:29:51,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 09:30:22] 2026-05-13 13:29:51,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 09:30:22] 2026-05-13 13:29:52,159 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 09:30:22] 2026-05-13 13:29:52,160 | INFO     | aborting loop
[2026-05-13 09:30:22] 2026-05-13 13:29:52,206 | INFO     | all data control threads have been joined
[2026-05-13 09:30:22] 2026-05-13 13:29:52,809 | INFO     | [job] retrieve thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:52,810 | INFO     | [job] queue monitor thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:52,824 | INFO     | [payload] validate_post thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:52,896 | INFO     | all payload control threads have been joined
[2026-05-13 09:30:22] 2026-05-13 13:29:53,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 09:30:22] 2026-05-13 13:29:53,164 | INFO     | [job] job monitor thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:53,170 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:53,209 | INFO     | [data] control thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:53,301 | INFO     | [job] validate thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:53,493 | INFO     | [payload] failed_post thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:53,499 | INFO     | all job control threads have been joined
[2026-05-13 09:30:22] 2026-05-13 13:29:53,530 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:53,743 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:53,900 | INFO     | [payload] control thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:54,120 | INFO     | [data] copytool_in thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:54,290 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:54,504 | INFO     | [job] control thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:55,111 | INFO     | [data] copytool_out thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:29:55,810 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 09:30:22] 2026-05-13 13:30:10,591 | INFO     | [monitor] cgroup control has ended
[2026-05-13 09:30:22] 2026-05-13 13:30:11,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139654509635392)>', '<ExcThread(monitor, started 139654162519808)>']
[2026-05-13 09:30:22] 2026-05-13 13:30:16,046 | INFO     | all workflow threads have been joined
[2026-05-13 09:30:22] 2026-05-13 13:30:16,047 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 09:30:22] 2026-05-13 13:30:16,047 | INFO     | traces error code: 0
[2026-05-13 09:30:22] 2026-05-13 13:30:16,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 09:30:22] 2026-05-13 13:30:21,692 | INFO     | PID=3003318 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-13 09:30:22] 2026-05-13 13:30:21,693 | INFO     | .. there are 9 such processes running
[2026-05-13 09:30:22] 2026-05-13 13:30:21,694 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 09:30:22] 2026-05-13 13:30:21,694 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 09:30:22] 2026-05-13 13:30:21,694 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 09:30:22] 2026-05-13 13:30:21,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 09:30:22] 2026-05-13 13:30:21,694 | INFO     | [monitor] control thread has ended
[2026-05-13 09:30:22] 2026-05-13 13:30:21,851 [wrapper] ==== pilot stdout END ====
[2026-05-13 09:30:22] 2026-05-13 13:30:21,856 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 09:30:22] 2026-05-13 13:30:21,862 [wrapper] pilotpid: 3003318
[2026-05-13 09:30:22] 2026-05-13 13:30:21,865 [wrapper] Pilot exit status: 0
[2026-05-13 09:30:22] 2026-05-13 13:30:21,877 [wrapper] pandaids: 7138067849
[2026-05-13 09:30:22] 2026-05-13 13:30:21,940 [wrapper] cleanup supervisor_pilot 3003329 3003319
[2026-05-13 09:30:22] 2026-05-13 13:30:21,943 [wrapper] Test setup, not cleaning
[2026-05-13 09:30:22] 2026-05-13 13:30:21,947 [wrapper] apfmon messages muted
[2026-05-13 09:30:22] 2026-05-13 13:30:21,950 [wrapper] ==== wrapper stdout END ====
[2026-05-13 09:30:22] 2026-05-13 13:30:21,954 [wrapper] ==== wrapper stderr END ====
[2026-05-13 09:30:22]  *** Error codes and diagnostics ***
[2026-05-13 09:30:22]     "exeErrorCode": 65,
[2026-05-13 09:30:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 09:30:22]     "pilotErrorCode": 1305,
[2026-05-13 09:30:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 09:30:22]  *** Listing of results directory ***
[2026-05-13 09:30:22] total 106140
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas    683926 May 13 06:02 pilot3.tar.gz
[2026-05-13 09:30:22] -rwx------. 1 boincer umatlas     36281 May 13 06:12 runpilot2-wrapper.sh
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas      5631 May 13 06:12 queuedata.json
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas       100 May 13 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 09:30:22] -rwxr-xr-x. 1 boincer umatlas      7986 May 13 09:25 run_atlas
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas       105 May 13 09:25 job.xml
[2026-05-13 09:30:22] -rw-r--r--. 2 boincer umatlas 104356296 May 13 09:25 EVNT.50238157._000250.pool.root.1
[2026-05-13 09:30:22] -rw-r--r--. 2 boincer umatlas     15667 May 13 09:25 start_atlas.sh
[2026-05-13 09:30:22] drwxrwx--x. 2 boincer umatlas      4096 May 13 09:25 shared
[2026-05-13 09:30:22] -rw-r--r--. 2 boincer umatlas    697436 May 13 09:25 input.tar.gz
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas         0 May 13 09:25 boinc_lockfile
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas      2560 May 13 09:25 pandaJob.out
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas        57 May 13 09:25 setup.sh.local
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas    997866 May 13 09:25 agis_schedconf.cvmfs.json
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas   1502367 May 13 09:25 agis_ddmendpoints.agis.ALL.json
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas       441 May 13 09:26 workernode_map.json
[2026-05-13 09:30:22] drwx------. 5 boincer umatlas      4096 May 13 09:26 pilot3
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas       483 May 13 09:27 boinc_task_state.xml
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas       975 May 13 09:27 memory_monitor_summary.json
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas     21721 May 13 09:27 log.50250192._006237.job.log.tgz.1
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas      7101 May 13 09:29 heartbeat_new.json
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas      7063 May 13 09:29 heartbeat.json
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas      6751 May 13 09:30 init_data.xml
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas      8192 May 13 09:30 boinc_mmap_file
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas        23 May 13 09:30 wrapper_checkpoint.txt
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas        95 May 13 09:30 pilot_heartbeat.json
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas       822 May 13 09:30 pilotlog.txt
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas     84101 May 13 09:30 log.50250192._006237.job.log.1
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas       188 May 13 09:30 output.list
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas       410 May 13 09:30 runtime_log
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas    122880 May 13 09:30 result.tar.gz
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas      8813 May 13 09:30 runtime_log.err
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas       638 May 13 09:30 4e82760fe3d6.diag
[2026-05-13 09:30:22] -rw-r--r--. 1 boincer umatlas     21807 May 13 09:30 stderr.txt
[2026-05-13 09:30:22] No HITS result produced
[2026-05-13 09:30:22]  *** Contents of shared directory: ***
[2026-05-13 09:30:22] total 102736
[2026-05-13 09:30:22] -rw-r--r--. 2 boincer umatlas 104356296 May 13 09:25 ATLAS.root_0
[2026-05-13 09:30:22] -rw-r--r--. 2 boincer umatlas     15667 May 13 09:25 start_atlas.sh
[2026-05-13 09:30:22] -rw-r--r--. 2 boincer umatlas    697436 May 13 09:25 input.tar.gz
[2026-05-13 09:30:22] -rw-------. 1 boincer umatlas    122880 May 13 09:30 result.tar.gz
09:30:23 (2998273): run_atlas exited; CPU time 31.305903
09:30:23 (2998273): called boinc_finish(0)

</stderr_txt>
]]>

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