Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:41:48 (27010): wrapper (7.7.26015): starting
15:41:48 (27010): wrapper: running run_atlas (--nthreads 8)
[2026-05-13 15:41:48] Arguments: --nthreads 8
[2026-05-13 15:41:48] Threads: 8
[2026-05-13 15:41:48] Checking for CVMFS
[2026-05-13 15:41:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 15:41:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 15:41:48] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 15:41:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 15:41:48] 2.11.2.0 19098 40132 104320 159484 2 241 23015230 25165825 410 130560 0 16335122 99.924 5291598 6546 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-13 15:41:48] CVMFS is ok
[2026-05-13 15:41:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 15:41:48] Checking for apptainer binary...
[2026-05-13 15:41:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-13 15:41:48] Running /usr/bin/apptainer --version
[2026-05-13 15:41:48] apptainer version 1.3.2-1.el7
[2026-05-13 15:41:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 15:41:50] cg-vwn407.simple-grid.lan
[2026-05-13 15:41:50] apptainer works
[2026-05-13 15:41:50] Set ATHENA_PROC_NUMBER=8
[2026-05-13 15:41:50] Set ATHENA_CORE_NUMBER=8
[2026-05-13 15:41:50] Starting ATLAS job with PandaID=7138065286
[2026-05-13 15:41:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 15:46:17]  *** The last 200 lines of the pilot log: ***
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | WARNING  | found no stored workdir sizes
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | WARNING  | wrong length of table data, x=[1778679767.0], y=[1480.0] (must be same and length>=4)
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | ..............................
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | . Timing measurements:
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | . get job = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . initial setup = 6 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . payload setup = 16 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . stage-in = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . payload execution = 37 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . stage-out = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . log creation = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | ..............................
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/6/PanDA_Pilot-7138065286/pilotlog.txt
[2026-05-13 15:46:17] 2026-05-13 13:45:18,887 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 15:46:17] - Log from pilotlog.txt -
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | INFO     | extracted standard info from prmon json
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | WARNING  | found no stored workdir sizes
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | WARNING  | wrong length of table data, x=[1778679767.0], y=[1480.0] (must be same and length>=4)
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | ..............................
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | . Timing measurements:
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | . get job = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . initial setup = 6 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . payload setup = 16 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . stage-in = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . payload execution = 37 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . stage-out = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . log creation = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | ..............................
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/6/PanDA_Pilot-7138065286/pilotlog.txt
[2026-05-13 15:46:17] 2026-05-13 13:45:18,887 | WARNING  | 
[2026-05-13 15:46:17] [begin log extracts]
[2026-05-13 15:46:17] - Log from pilotlog.txt -
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | INFO     | extracted standard info from prmon json
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | WARNING  | found no stored workdir sizes
[2026-05-13 15:46:17] 2026-05-13 13:45:18,853 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | WARNING  | wrong length of table data, x=[1778679767.0], y=[1480.0] (must be same and length>=4)
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | ..............................
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | . Timing measurements:
[2026-05-13 15:46:17] 2026-05-13 13:45:18,854 | INFO     | . get job = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . initial setup = 6 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . payload setup = 16 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . stage-in = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . payload execution = 37 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . stage-out = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | . log creation = 0 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | ..............................
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 15:46:17] 2026-05-13 13:45:18,855 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/6/PanDA_Pilot-7138065286/pilotlog.txt
[2026-05-13 15:46:17] [end log extracts]
[2026-05-13 15:46:17] 2026-05-13 13:45:18,888 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 15:46:17] 2026-05-13 13:45:18,888 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 15:46:17] 2026-05-13 13:45:18,998 | INFO     | 
[2026-05-13 15:46:17] 2026-05-13 13:45:18,998 | INFO     | job summary report
[2026-05-13 15:46:17] 2026-05-13 13:45:18,998 | INFO     | --------------------------------------------------
[2026-05-13 15:46:17] 2026-05-13 13:45:18,998 | INFO     | PanDA job id: 7138065286
[2026-05-13 15:46:17] 2026-05-13 13:45:18,998 | INFO     | task id: 50250192
[2026-05-13 15:46:17] 2026-05-13 13:45:18,998 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-13 13:43:13,293 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 15:46:17] 2026-05-13 13:45:18,998 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 15:46:17] 2026-05-13 13:45:18,999 | INFO     | pilot state: failed 
[2026-05-13 15:46:17] 2026-05-13 13:45:18,999 | INFO     | transexitcode: 65
[2026-05-13 15:46:17] 2026-05-13 13:45:18,999 | INFO     | exeerrorcode: 65
[2026-05-13 15:46:17] 2026-05-13 13:45:18,999 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 15:46:17] 2026-05-13 13:45:18,999 | INFO     | exitcode: 65
[2026-05-13 15:46:17] 2026-05-13 13:45:18,999 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 15:46:17] 2026-05-13 13:45:18,999 | INFO     | cpuconsumptiontime: 28 s
[2026-05-13 15:46:17] 2026-05-13 13:45:18,999 | INFO     | nevents: 0
[2026-05-13 15:46:17] 2026-05-13 13:45:18,999 | INFO     | neventsw: 0
[2026-05-13 15:46:17] 2026-05-13 13:45:19,000 | INFO     | pid: 2817
[2026-05-13 15:46:17] 2026-05-13 13:45:19,000 | INFO     | pgrp: 2817
[2026-05-13 15:46:17] 2026-05-13 13:45:19,000 | INFO     | corecount: 8
[2026-05-13 15:46:17] 2026-05-13 13:45:19,000 | INFO     | event service: False
[2026-05-13 15:46:17] 2026-05-13 13:45:19,000 | INFO     | sizes: {0: 2265700, 1: 2267529, 11: 2267529, 58: 2295238, 176: 2295376}
[2026-05-13 15:46:17] 2026-05-13 13:45:19,000 | INFO     | --------------------------------------------------
[2026-05-13 15:46:17] 2026-05-13 13:45:19,000 | INFO     | 
[2026-05-13 15:46:17] 2026-05-13 13:45:19,000 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-13 15:46:17] 2026-05-13 13:45:19,032 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,032 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,032 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,032 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,032 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,032 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,032 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,034 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 15:46:17] 2026-05-13 13:45:19,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,034 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 15:46:17] 2026-05-13 13:45:19,034 | INFO     | job 7138065286 has completed (purged errors)
[2026-05-13 15:46:17] 2026-05-13 13:45:19,034 | INFO     | overall cleanup function is called
[2026-05-13 15:46:17] 2026-05-13 13:45:20,040 | INFO     | --- collectZombieJob: --- 10, [2817]
[2026-05-13 15:46:17] 2026-05-13 13:45:20,041 | INFO     | zombie collector waiting for pid 2817
[2026-05-13 15:46:17] 2026-05-13 13:45:20,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 15:46:17] 2026-05-13 13:45:20,041 | INFO     | collected zombie processes
[2026-05-13 15:46:17] 2026-05-13 13:45:20,041 | INFO     | will attempt to kill all subprocesses of pid=2817
[2026-05-13 15:46:17] 2026-05-13 13:45:20,092 | INFO     | process IDs to be killed: [2817] (in reverse order)
[2026-05-13 15:46:17] 2026-05-13 13:45:20,148 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 15:46:17] 2026-05-13 13:45:20,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 15:46:17] 2026-05-13 13:45:20,151 | INFO     | did not find any defunct processes belonging to 2817
[2026-05-13 15:46:17] 2026-05-13 13:45:20,152 | INFO     | did not find any defunct processes belonging to 2817
[2026-05-13 15:46:17] 2026-05-13 13:45:20,152 | INFO     | Ready for new job
[2026-05-13 15:46:17] 2026-05-13 13:45:20,153 | INFO     | ***************************************
[2026-05-13 15:46:17] 2026-05-13 13:45:20,154 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 15:46:17] 2026-05-13 13:45:20,154 | INFO     | ***************************************
[2026-05-13 15:46:17] 2026-05-13 13:45:20,154 | INFO     | 
[2026-05-13 15:46:17] 2026-05-13 13:45:20,154 | INFO     | pilot is running in a VM
[2026-05-13 15:46:17] 2026-05-13 13:45:20,154 | INFO     | architecture information:
[2026-05-13 15:46:17] 2026-05-13 13:45:20,155 | INFO     | executing command: cat /etc/os-release
[2026-05-13 15:46:17] 2026-05-13 13:45:20,175 | INFO     | cat /etc/os-release:
[2026-05-13 15:46:17] NAME="CentOS Linux"
[2026-05-13 15:46:17] VERSION="7 (Core)"
[2026-05-13 15:46:17] ID="centos"
[2026-05-13 15:46:17] ID_LIKE="rhel fedora"
[2026-05-13 15:46:17] VERSION_ID="7"
[2026-05-13 15:46:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 15:46:17] ANSI_COLOR="0;31"
[2026-05-13 15:46:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 15:46:17] HOME_URL="https://www.centos.org/"
[2026-05-13 15:46:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 15:46:17] 
[2026-05-13 15:46:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 15:46:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 15:46:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 15:46:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 15:46:17] 
[2026-05-13 15:46:17] 2026-05-13 13:45:20,176 | INFO     | ***************************************
[2026-05-13 15:46:17] 2026-05-13 13:45:20,679 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-13 15:46:17] 2026-05-13 13:45:20,706 | INFO     | sufficient remaining disk space (497675141120 B)
[2026-05-13 15:46:17] 2026-05-13 13:45:20,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 15:46:17] 2026-05-13 13:45:20,707 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 15:46:17] 2026-05-13 13:45:20,707 | INFO     | update_server=False
[2026-05-13 15:46:17] 2026-05-13 13:45:20,707 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 15:46:17] 2026-05-13 13:45:20,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 15:46:17] 2026-05-13 13:45:20,708 | INFO     | aborting loop
[2026-05-13 15:46:17] 2026-05-13 13:45:20,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 15:46:17] 2026-05-13 13:45:20,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 15:46:17] 2026-05-13 13:45:20,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 15:46:17] 2026-05-13 13:45:20,712 | INFO     | all data control threads have been joined
[2026-05-13 15:46:17] 2026-05-13 13:45:21,294 | INFO     | all job control threads have been joined
[2026-05-13 15:46:17] 2026-05-13 13:45:21,576 | INFO     | all payload control threads have been joined
[2026-05-13 15:46:17] 2026-05-13 13:45:21,709 | INFO     | [job] job monitor thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:21,713 | INFO     | [job] retrieve thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:21,714 | INFO     | [job] queue monitor thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:21,718 | INFO     | [data] control thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:21,722 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:21,882 | INFO     | [payload] validate_post thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:21,953 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:22,282 | INFO     | [data] copytool_in thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:22,299 | INFO     | [job] control thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:22,310 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:22,488 | INFO     | [payload] failed_post thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:22,515 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:22,582 | INFO     | [payload] control thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:22,714 | INFO     | [data] copytool_out thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:22,924 | INFO     | [job] validate thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:24,716 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 15:46:17] 2026-05-13 13:45:51,205 | INFO     | PID=30752 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-13 15:46:17] 2026-05-13 13:45:51,205 | INFO     | .. there are 2 such processes running
[2026-05-13 15:46:17] 2026-05-13 13:45:51,205 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 15:46:17] 2026-05-13 13:45:51,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 15:46:17] 2026-05-13 13:45:51,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 15:46:17] 2026-05-13 13:46:11,968 | INFO     | [monitor] cgroup control has ended
[2026-05-13 15:46:17] 2026-05-13 13:46:12,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627652917056)>', '<ExcThread(monitor, started 139627214128896)>']
[2026-05-13 15:46:17] 2026-05-13 13:46:13,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 15:46:17] 2026-05-13 13:46:13,282 | INFO     | [monitor] control thread has ended
[2026-05-13 15:46:17] 2026-05-13 13:46:17,452 | INFO     | all workflow threads have been joined
[2026-05-13 15:46:17] 2026-05-13 13:46:17,452 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 15:46:17] 2026-05-13 13:46:17,452 | INFO     | traces error code: 0
[2026-05-13 15:46:17] 2026-05-13 13:46:17,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 15:46:17] 2026-05-13 13:46:17,576 [wrapper] ==== pilot stdout END ====
[2026-05-13 15:46:17] 2026-05-13 13:46:17,580 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 15:46:17] 2026-05-13 13:46:17,585 [wrapper] pilotpid: 30752
[2026-05-13 15:46:17] 2026-05-13 13:46:17,590 [wrapper] Pilot exit status: 0
[2026-05-13 15:46:17] 2026-05-13 13:46:17,610 [wrapper] pandaids: 7138065286
[2026-05-13 15:46:17] 2026-05-13 13:46:17,641 [wrapper] cleanup supervisor_pilot 30758 30753
[2026-05-13 15:46:17] 2026-05-13 13:46:17,650 [wrapper] Test setup, not cleaning
[2026-05-13 15:46:17] 2026-05-13 13:46:17,656 [wrapper] apfmon messages muted
[2026-05-13 15:46:17] 2026-05-13 13:46:17,659 [wrapper] ==== wrapper stdout END ====
[2026-05-13 15:46:17] 2026-05-13 13:46:17,662 [wrapper] ==== wrapper stderr END ====
[2026-05-13 15:46:17]  *** Error codes and diagnostics ***
[2026-05-13 15:46:17]     "exeErrorCode": 65,
[2026-05-13 15:46:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 15:46:17]     "pilotErrorCode": 1305,
[2026-05-13 15:46:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 15:46:17]  *** Listing of results directory ***
[2026-05-13 15:46:17] total 105864
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc    683926 May 13 12:02 pilot3.tar.gz
[2026-05-13 15:46:17] -rwx------. 1 boinc boinc     36281 May 13 12:12 runpilot2-wrapper.sh
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc      5631 May 13 12:12 queuedata.json
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc       100 May 13 15:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 15:46:17] -rwxr-xr-x. 1 boinc boinc      7986 May 13 15:41 run_atlas
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc       105 May 13 15:41 job.xml
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc      6305 May 13 15:41 init_data.xml
[2026-05-13 15:46:17] -rw-r--r--. 2 boinc boinc 104104896 May 13 15:41 EVNT.50238157._000211.pool.root.1
[2026-05-13 15:46:17] -rw-r--r--. 2 boinc boinc     15667 May 13 15:41 start_atlas.sh
[2026-05-13 15:46:17] drwxrwx--x. 2 boinc boinc        68 May 13 15:41 shared
[2026-05-13 15:46:17] -rw-r--r--. 2 boinc boinc    697439 May 13 15:41 input.tar.gz
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc         0 May 13 15:41 boinc_lockfile
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc      2560 May 13 15:41 pandaJob.out
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc    997866 May 13 15:42 agis_schedconf.cvmfs.json
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc   1502367 May 13 15:42 agis_ddmendpoints.agis.ALL.json
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc       415 May 13 15:42 workernode_map.json
[2026-05-13 15:46:17] drwx------. 5 boinc boinc      4096 May 13 15:42 pilot3
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc       482 May 13 15:43 boinc_task_state.xml
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc       955 May 13 15:43 memory_monitor_summary.json
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc     20480 May 13 15:43 log.50250192._005258.job.log.tgz.1
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc        95 May 13 15:45 pilot_heartbeat.json
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc      7005 May 13 15:45 heartbeat_new.json
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc      6967 May 13 15:45 heartbeat.json
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc        23 May 13 15:45 wrapper_checkpoint.txt
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc      8192 May 13 15:45 boinc_mmap_file
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc      4883 May 13 15:46 pilotlog.txt
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc     75568 May 13 15:46 log.50250192._005258.job.log.1
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc       188 May 13 15:46 output.list
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc       410 May 13 15:46 runtime_log
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc    112640 May 13 15:46 result.tar.gz
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc      8285 May 13 15:46 runtime_log.err
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc       637 May 13 15:46 4e72d94f51c1.diag
[2026-05-13 15:46:17] -rw-r--r--. 1 boinc boinc     21255 May 13 15:46 stderr.txt
[2026-05-13 15:46:17] No HITS result produced
[2026-05-13 15:46:17]  *** Contents of shared directory: ***
[2026-05-13 15:46:17] total 102480
[2026-05-13 15:46:17] -rw-r--r--. 2 boinc boinc 104104896 May 13 15:41 ATLAS.root_0
[2026-05-13 15:46:17] -rw-r--r--. 2 boinc boinc     15667 May 13 15:41 start_atlas.sh
[2026-05-13 15:46:17] -rw-r--r--. 2 boinc boinc    697439 May 13 15:41 input.tar.gz
[2026-05-13 15:46:17] -rw-------. 1 boinc boinc    112640 May 13 15:46 result.tar.gz
15:46:19 (27010): run_atlas exited; CPU time 28.516738
15:46:19 (27010): called boinc_finish(0)

</stderr_txt>
]]>

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