Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:34:59 (4114825): wrapper (7.7.26015): starting
08:34:59 (4114825): wrapper: running run_atlas (--nthreads 9)
[2026-05-13 08:34:59] Arguments: --nthreads 9
[2026-05-13 08:34:59] Threads: 9
[2026-05-13 08:34:59] Checking for CVMFS
[2026-05-13 08:35:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 08:35:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 08:35:00] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 08:35:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 08:35:00] 2.13.3.0 18549 18639 275908 159483 3 516 16728834 32947201 22160 16776704 0 72021664 99.458 98222233 29137 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-13 08:35:00] CVMFS is ok
[2026-05-13 08:35:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 08:35:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 08:35:00] Further information can be found at the LHC@home message board.
[2026-05-13 08:35:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 08:35:00] Checking for apptainer binary...
[2026-05-13 08:35:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-13 08:35:00] Running /usr/bin/apptainer --version
[2026-05-13 08:35:00] apptainer version 1.4.5-3.el9
[2026-05-13 08:35:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 08:35:01] c6-6-8-2.aglt2.org
[2026-05-13 08:35:01] apptainer works
[2026-05-13 08:35:01] Set ATHENA_PROC_NUMBER=9
[2026-05-13 08:35:01] Set ATHENA_CORE_NUMBER=9
[2026-05-13 08:35:01] Starting ATLAS job with PandaID=7138064921
[2026-05-13 08:35:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 08:39:54]  *** The last 200 lines of the pilot log: ***
[2026-05-13 08:39:54] 2026-05-13 12:39:36,361 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | WARNING  | wrong length of table data, x=[1778675808.0], y=[1602.0] (must be same and length>=4)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | INFO     | could have reported an average CPU frequency of 2471 MHz (4 samples)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | ..............................
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . Timing measurements:
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . get job = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . initial setup = 19 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . payload setup = 31 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . stage-in = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . payload execution = 59 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . stage-out = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . log creation = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | ..............................
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 08:39:54] 2026-05-13 12:39:36,364 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138064921/pilotlog.txt
[2026-05-13 08:39:54] 2026-05-13 12:39:36,475 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 08:39:54] - Log from pilotlog.txt -
[2026-05-13 08:39:54] 2026-05-13 12:39:36,342 | INFO     | payload/TRF did not report the number of read events
[2026-05-13 08:39:54] 2026-05-13 12:39:36,360 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7138064921/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,361 | INFO     | extracted standard info from prmon json
[2026-05-13 08:39:54] 2026-05-13 12:39:36,361 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | WARNING  | wrong length of table data, x=[1778675808.0], y=[1602.0] (must be same and length>=4)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | INFO     | could have reported an average CPU frequency of 2471 MHz (4 samples)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | ..............................
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . Timing measurements:
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . get job = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . initial setup = 19 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . payload setup = 31 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . stage-in = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . payload execution = 59 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . stage-out = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . log creation = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | ..............................
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 08:39:54] 2026-05-13 12:39:36,364 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138064921/pilotlog.txt
[2026-05-13 08:39:54] 2026-05-13 12:39:36,476 | WARNING  | 
[2026-05-13 08:39:54] [begin log extracts]
[2026-05-13 08:39:54] - Log from pilotlog.txt -
[2026-05-13 08:39:54] 2026-05-13 12:39:36,342 | INFO     | payload/TRF did not report the number of read events
[2026-05-13 08:39:54] 2026-05-13 12:39:36,360 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7138064921/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,361 | INFO     | extracted standard info from prmon json
[2026-05-13 08:39:54] 2026-05-13 12:39:36,361 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | WARNING  | wrong length of table data, x=[1778675808.0], y=[1602.0] (must be same and length>=4)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,362 | INFO     | could have reported an average CPU frequency of 2471 MHz (4 samples)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | ..............................
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . Timing measurements:
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . get job = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . initial setup = 19 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . payload setup = 31 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . stage-in = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . payload execution = 59 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . stage-out = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | . log creation = 0 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | ..............................
[2026-05-13 08:39:54] 2026-05-13 12:39:36,363 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 08:39:54] 2026-05-13 12:39:36,364 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7138064921/pilotlog.txt
[2026-05-13 08:39:54] [end log extracts]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,476 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,477 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 08:39:54] 2026-05-13 12:39:36,587 | INFO     | 
[2026-05-13 08:39:54] 2026-05-13 12:39:36,587 | INFO     | job summary report
[2026-05-13 08:39:54] 2026-05-13 12:39:36,587 | INFO     | --------------------------------------------------
[2026-05-13 08:39:54] 2026-05-13 12:39:36,587 | INFO     | PanDA job id: 7138064921
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | task id: 50250192
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-13 12:37:27,132 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | pilot state: failed 
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | transexitcode: 65
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | exeerrorcode: 65
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | exitcode: 65
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | cpuconsumptiontime: 27 s
[2026-05-13 08:39:54] 2026-05-13 12:39:36,588 | INFO     | nevents: 0
[2026-05-13 08:39:54] 2026-05-13 12:39:36,589 | INFO     | neventsw: 0
[2026-05-13 08:39:54] 2026-05-13 12:39:36,589 | INFO     | pid: 4138138
[2026-05-13 08:39:54] 2026-05-13 12:39:36,589 | INFO     | pgrp: 4138138
[2026-05-13 08:39:54] 2026-05-13 12:39:36,589 | INFO     | corecount: 9
[2026-05-13 08:39:54] 2026-05-13 12:39:36,589 | INFO     | event service: False
[2026-05-13 08:39:54] 2026-05-13 12:39:36,589 | INFO     | sizes: {0: 2265043, 1: 2265955, 2: 2267529, 12: 2267557, 95: 2295335, 99: 2295335, 216: 2295629}
[2026-05-13 08:39:54] 2026-05-13 12:39:36,589 | INFO     | --------------------------------------------------
[2026-05-13 08:39:54] 2026-05-13 12:39:36,589 | INFO     | 
[2026-05-13 08:39:54] 2026-05-13 12:39:36,589 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-13 08:39:54] 2026-05-13 12:39:36,634 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,634 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,636 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,636 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,636 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,636 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,636 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 08:39:54] 2026-05-13 12:39:36,636 | INFO     | job 7138064921 has completed (purged errors)
[2026-05-13 08:39:54] 2026-05-13 12:39:36,636 | INFO     | overall cleanup function is called
[2026-05-13 08:39:54] 2026-05-13 12:39:37,643 | INFO     | --- collectZombieJob: --- 10, [4138138]
[2026-05-13 08:39:54] 2026-05-13 12:39:37,643 | INFO     | zombie collector waiting for pid 4138138
[2026-05-13 08:39:54] 2026-05-13 12:39:37,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 08:39:54] 2026-05-13 12:39:37,644 | INFO     | collected zombie processes
[2026-05-13 08:39:54] 2026-05-13 12:39:37,644 | INFO     | will attempt to kill all subprocesses of pid=4138138
[2026-05-13 08:39:54] 2026-05-13 12:39:38,578 | INFO     | PID=4119436 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-13 08:39:54] 2026-05-13 12:39:38,578 | INFO     | .. there are 22 such processes running
[2026-05-13 08:39:54] 2026-05-13 12:39:38,595 | INFO     | process IDs to be killed: [4138138] (in reverse order)
[2026-05-13 08:39:54] 2026-05-13 12:39:38,776 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 08:39:54] 2026-05-13 12:39:38,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 08:39:54] 2026-05-13 12:39:38,794 | INFO     | did not find any defunct processes belonging to 4138138
[2026-05-13 08:39:54] 2026-05-13 12:39:38,812 | INFO     | did not find any defunct processes belonging to 4138138
[2026-05-13 08:39:54] 2026-05-13 12:39:38,812 | INFO     | Ready for new job
[2026-05-13 08:39:54] 2026-05-13 12:39:38,813 | INFO     | ***************************************
[2026-05-13 08:39:54] 2026-05-13 12:39:38,814 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 08:39:54] 2026-05-13 12:39:38,814 | INFO     | ***************************************
[2026-05-13 08:39:54] 2026-05-13 12:39:38,814 | INFO     | 
[2026-05-13 08:39:54] 2026-05-13 12:39:38,819 | INFO     | architecture information:
[2026-05-13 08:39:54] 2026-05-13 12:39:38,820 | INFO     | executing command: cat /etc/os-release
[2026-05-13 08:39:54] 2026-05-13 12:39:38,846 | INFO     | cat /etc/os-release:
[2026-05-13 08:39:54] NAME="CentOS Linux"
[2026-05-13 08:39:54] VERSION="7 (Core)"
[2026-05-13 08:39:54] ID="centos"
[2026-05-13 08:39:54] ID_LIKE="rhel fedora"
[2026-05-13 08:39:54] VERSION_ID="7"
[2026-05-13 08:39:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 08:39:54] ANSI_COLOR="0;31"
[2026-05-13 08:39:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 08:39:54] HOME_URL="https://www.centos.org/"
[2026-05-13 08:39:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 08:39:54] 
[2026-05-13 08:39:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 08:39:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 08:39:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 08:39:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 08:39:54] 
[2026-05-13 08:39:54] 2026-05-13 12:39:38,846 | INFO     | ***************************************
[2026-05-13 08:39:54] 2026-05-13 12:39:39,349 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-13 08:39:54] 2026-05-13 12:39:39,374 | INFO     | sufficient remaining disk space (76373032960 B)
[2026-05-13 08:39:54] 2026-05-13 12:39:39,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 08:39:54] 2026-05-13 12:39:39,375 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 08:39:54] 2026-05-13 12:39:39,375 | INFO     | update_server=False
[2026-05-13 08:39:54] 2026-05-13 12:39:39,375 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 08:39:54] 2026-05-13 12:39:39,375 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-13 08:39:54] 2026-05-13 12:39:39,376 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 08:39:54] 2026-05-13 12:39:39,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 08:39:54] 2026-05-13 12:39:39,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 08:39:54] 2026-05-13 12:39:39,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 08:39:54] 2026-05-13 12:39:39,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 08:39:54] 2026-05-13 12:39:39,379 | INFO     | aborting loop
[2026-05-13 08:39:54] 2026-05-13 12:39:39,667 | INFO     | all job control threads have been joined
[2026-05-13 08:39:54] 2026-05-13 12:39:39,949 | INFO     | all payload control threads have been joined
[2026-05-13 08:39:54] 2026-05-13 12:39:40,381 | INFO     | [job] retrieve thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:40,385 | INFO     | [job] job monitor thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:40,466 | INFO     | all data control threads have been joined
[2026-05-13 08:39:54] 2026-05-13 12:39:40,588 | INFO     | [job] validate thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:40,673 | INFO     | [job] control thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:40,859 | INFO     | [payload] validate_post thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:40,891 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:40,955 | INFO     | [payload] control thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:41,236 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:41,263 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:41,384 | INFO     | [data] copytool_out thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:41,472 | INFO     | [data] control thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:41,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 08:39:54] 2026-05-13 12:39:41,704 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:41,730 | INFO     | [data] copytool_in thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:41,772 | INFO     | [payload] failed_post thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:42,609 | INFO     | [job] queue monitor thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:42,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 08:39:54] 2026-05-13 12:39:46,665 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 08:39:54] 2026-05-13 12:39:48,521 | INFO     | [monitor] cgroup control has ended
[2026-05-13 08:39:54] 2026-05-13 12:39:48,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967987423040)>', '<ExcThread(monitor, started 139967632217856)>']
[2026-05-13 08:39:54] 2026-05-13 12:39:49,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 08:39:54] 2026-05-13 12:39:49,442 | INFO     | [monitor] control thread has ended
[2026-05-13 08:39:54] 2026-05-13 12:39:53,571 | INFO     | all workflow threads have been joined
[2026-05-13 08:39:54] 2026-05-13 12:39:53,571 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 08:39:54] 2026-05-13 12:39:53,572 | INFO     | traces error code: 0
[2026-05-13 08:39:54] 2026-05-13 12:39:53,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 08:39:54] 2026-05-13 12:39:53,784 [wrapper] ==== pilot stdout END ====
[2026-05-13 08:39:54] 2026-05-13 12:39:53,789 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 08:39:54] 2026-05-13 12:39:53,794 [wrapper] pilotpid: 4119436
[2026-05-13 08:39:54] 2026-05-13 12:39:53,799 [wrapper] Pilot exit status: 0
[2026-05-13 08:39:54] 2026-05-13 12:39:53,884 [wrapper] pandaids: 7138064921
[2026-05-13 08:39:54] 2026-05-13 12:39:54,131 [wrapper] cleanup supervisor_pilot 4119444 4119437
[2026-05-13 08:39:54] 2026-05-13 12:39:54,136 [wrapper] Test setup, not cleaning
[2026-05-13 08:39:54] 2026-05-13 12:39:54,139 [wrapper] apfmon messages muted
[2026-05-13 08:39:54] 2026-05-13 12:39:54,142 [wrapper] ==== wrapper stdout END ====
[2026-05-13 08:39:54] 2026-05-13 12:39:54,144 [wrapper] ==== wrapper stderr END ====
[2026-05-13 08:39:54]  *** Error codes and diagnostics ***
[2026-05-13 08:39:54]     "exeErrorCode": 65,
[2026-05-13 08:39:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 08:39:54]     "pilotErrorCode": 1305,
[2026-05-13 08:39:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 08:39:54]  *** Listing of results directory ***
[2026-05-13 08:39:54] total 105572
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas    683926 May 13 06:02 pilot3.tar.gz
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas      5631 May 13 06:09 queuedata.json
[2026-05-13 08:39:54] -rwx------ 1 boincer umatlas     36281 May 13 06:11 runpilot2-wrapper.sh
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas       100 May 13 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 08:39:54] -rwxr-xr-x 1 boincer umatlas      7986 May 13 08:34 run_atlas
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas       105 May 13 08:34 job.xml
[2026-05-13 08:39:54] -rw-r--r-- 2 boincer umatlas 103773683 May 13 08:34 EVNT.50238157._000199.pool.root.1
[2026-05-13 08:39:54] -rw-r--r-- 2 boincer umatlas     15667 May 13 08:34 start_atlas.sh
[2026-05-13 08:39:54] drwxrwx--x 2 boincer umatlas      4096 May 13 08:34 shared
[2026-05-13 08:39:54] -rw-r--r-- 2 boincer umatlas    697437 May 13 08:34 input.tar.gz
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas         0 May 13 08:34 boinc_lockfile
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas      2560 May 13 08:35 pandaJob.out
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas        57 May 13 08:35 setup.sh.local
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas    997866 May 13 08:35 agis_schedconf.cvmfs.json
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas   1502367 May 13 08:35 agis_ddmendpoints.agis.ALL.json
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas       441 May 13 08:35 workernode_map.json
[2026-05-13 08:39:54] drwx------ 5 boincer umatlas      4096 May 13 08:35 pilot3
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas       482 May 13 08:37 boinc_task_state.xml
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas       974 May 13 08:37 memory_monitor_summary.json
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas     21345 May 13 08:37 log.50250192._004968.job.log.tgz.1
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas      6768 May 13 08:39 init_data.xml
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas        95 May 13 08:39 pilot_heartbeat.json
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas      7114 May 13 08:39 heartbeat_new.json
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas      7076 May 13 08:39 heartbeat.json
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas      8192 May 13 08:39 boinc_mmap_file
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas        23 May 13 08:39 wrapper_checkpoint.txt
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas      4551 May 13 08:39 pilotlog.txt
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas     85287 May 13 08:39 log.50250192._004968.job.log.1
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas       188 May 13 08:39 output.list
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas       410 May 13 08:39 runtime_log
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas    122880 May 13 08:39 result.tar.gz
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas      8811 May 13 08:39 runtime_log.err
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas       638 May 13 08:39 4e65888d6a91.diag
[2026-05-13 08:39:54] -rw-r--r-- 1 boincer umatlas     21860 May 13 08:39 stderr.txt
[2026-05-13 08:39:54] No HITS result produced
[2026-05-13 08:39:54]  *** Contents of shared directory: ***
[2026-05-13 08:39:54] total 102164
[2026-05-13 08:39:54] -rw-r--r-- 2 boincer umatlas 103773683 May 13 08:34 ATLAS.root_0
[2026-05-13 08:39:54] -rw-r--r-- 2 boincer umatlas     15667 May 13 08:34 start_atlas.sh
[2026-05-13 08:39:54] -rw-r--r-- 2 boincer umatlas    697437 May 13 08:34 input.tar.gz
[2026-05-13 08:39:54] -rw------- 1 boincer umatlas    122880 May 13 08:39 result.tar.gz
08:39:56 (4114825): run_atlas exited; CPU time 35.852640
08:39:56 (4114825): called boinc_finish(0)

</stderr_txt>
]]>

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