Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
13:44:55 (21290): wrapper (7.7.26015): starting
13:44:55 (21290): wrapper: running run_atlas (--nthreads 8)
[2026-05-13 13:44:55] Arguments: --nthreads 8
[2026-05-13 13:44:55] Threads: 8
[2026-05-13 13:44:55] Checking for CVMFS
[2026-05-13 13:44:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 13:44:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 13:44:55] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 13:44:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 13:44:55] 2.11.0.0 4196 1712 47956 159479 3 186 1161168 4096001 0 130560 0 144250 98.752 404931 1307 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-05-13 13:44:55] CVMFS is ok
[2026-05-13 13:44:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 13:44:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 13:44:55] Further information can be found at the LHC@home message board.
[2026-05-13 13:44:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 13:44:55] Checking for apptainer binary...
[2026-05-13 13:44:55] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-05-13 13:44:55] apptainer is not installed, using version from CVMFS
[2026-05-13 13:44:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 13:44:56] WARNING: Environment variable TMPDIR already has value [/tmp/job_11604247/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node418
[2026-05-13 13:44:56] apptainer works
[2026-05-13 13:44:56] Set ATHENA_PROC_NUMBER=8
[2026-05-13 13:44:56] Set ATHENA_CORE_NUMBER=8
[2026-05-13 13:44:56] Starting ATLAS job with PandaID=7138064966
[2026-05-13 13:44:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11604247/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 13:48:09]  *** The last 200 lines of the pilot log: ***
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | WARNING  | found no stored workdir sizes
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | WARNING  | wrong length of table data, x=[1778672719.0], y=[2372.0] (must be same and length>=4)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | could have reported an average CPU frequency of 2521 MHz (4 samples)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | ..............................
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . Timing measurements:
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . get job = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . initial setup = 2 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . payload setup = 3 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . stage-in = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . payload execution = 13 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . stage-out = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . log creation = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | ..............................
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | executing command: tail -n 20 /tmp/job_11604247/atlas/pilot/slots/0/PanDA_Pilot-7138064966/pilotlog.txt
[2026-05-13 13:48:09] 2026-05-13 11:47:33,327 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-13 13:48:09] - Log from pilotlog.txt -
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | INFO     | extracted standard info from prmon json
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | WARNING  | found no stored workdir sizes
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | WARNING  | wrong length of table data, x=[1778672719.0], y=[2372.0] (must be same and length>=4)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | could have reported an average CPU frequency of 2521 MHz (4 samples)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | ..............................
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . Timing measurements:
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . get job = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . initial setup = 2 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . payload setup = 3 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . stage-in = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . payload execution = 13 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . stage-out = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . log creation = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | ..............................
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | executing command: tail -n 20 /tmp/job_11604247/atlas/pilot/slots/0/PanDA_Pilot-7138064966/pilotlog.txt
[2026-05-13 13:48:09] 2026-05-13 11:47:33,328 | WARNING  | 
[2026-05-13 13:48:09] [begin log extracts]
[2026-05-13 13:48:09] - Log from pilotlog.txt -
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | INFO     | extracted standard info from prmon json
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | WARNING  | found no stored workdir sizes
[2026-05-13 13:48:09] 2026-05-13 11:47:33,320 | INFO     | will not add max space = 0 B to job metrics
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | WARNING  | wrong length of table data, x=[1778672719.0], y=[2372.0] (must be same and length>=4)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | could have reported an average CPU frequency of 2521 MHz (4 samples)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | ..............................
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . Timing measurements:
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . get job = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . initial setup = 2 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . payload setup = 3 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . stage-in = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . payload execution = 13 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . stage-out = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | . log creation = 0 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | ..............................
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-13 13:48:09] 2026-05-13 11:47:33,321 | INFO     | executing command: tail -n 20 /tmp/job_11604247/atlas/pilot/slots/0/PanDA_Pilot-7138064966/pilotlog.txt
[2026-05-13 13:48:09] [end log extracts]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,328 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,328 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | 
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | job summary report
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | --------------------------------------------------
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | PanDA job id: 7138064966
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | task id: 50250192
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-13 13:45:26,669 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | pilot state: failed 
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | transexitcode: 65
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | exeerrorcode: 65
[2026-05-13 13:48:09] 2026-05-13 11:47:33,376 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | exitcode: 65
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | cpuconsumptiontime: 10 s
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | nevents: 0
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | neventsw: 0
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | pid: 7031
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | pgrp: 7031
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | corecount: 8
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | event service: False
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | sizes: {0: 2265997, 1: 2267655, 11: 2267655, 20: 2295203, 23: 2295203, 140: 2295369}
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | --------------------------------------------------
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | 
[2026-05-13 13:48:09] 2026-05-13 11:47:33,377 | INFO     | executing command: ls -lF /tmp/job_11604247/atlas/pilot/slots/0
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,387 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,387 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 13:48:09] 2026-05-13 11:47:33,387 | INFO     | job 7138064966 has completed (purged errors)
[2026-05-13 13:48:09] 2026-05-13 11:47:33,387 | INFO     | overall cleanup function is called
[2026-05-13 13:48:09] 2026-05-13 11:47:34,388 | INFO     | --- collectZombieJob: --- 10, [7031]
[2026-05-13 13:48:09] 2026-05-13 11:47:34,388 | INFO     | zombie collector waiting for pid 7031
[2026-05-13 13:48:09] 2026-05-13 11:47:34,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 13:48:09] 2026-05-13 11:47:34,388 | INFO     | collected zombie processes
[2026-05-13 13:48:09] 2026-05-13 11:47:34,388 | INFO     | will attempt to kill all subprocesses of pid=7031
[2026-05-13 13:48:09] 2026-05-13 11:47:34,468 | INFO     | process IDs to be killed: [7031] (in reverse order)
[2026-05-13 13:48:09] 2026-05-13 11:47:34,502 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 13:48:09] 2026-05-13 11:47:34,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 13:48:09] 2026-05-13 11:47:34,506 | INFO     | did not find any defunct processes belonging to 7031
[2026-05-13 13:48:09] 2026-05-13 11:47:34,509 | INFO     | did not find any defunct processes belonging to 7031
[2026-05-13 13:48:09] 2026-05-13 11:47:34,509 | INFO     | Ready for new job
[2026-05-13 13:48:09] 2026-05-13 11:47:34,509 | INFO     | ***************************************
[2026-05-13 13:48:09] 2026-05-13 11:47:34,509 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 13:48:09] 2026-05-13 11:47:34,509 | INFO     | ***************************************
[2026-05-13 13:48:09] 2026-05-13 11:47:34,509 | INFO     | 
[2026-05-13 13:48:09] 2026-05-13 11:47:34,523 | INFO     | architecture information:
[2026-05-13 13:48:09] 2026-05-13 11:47:34,523 | INFO     | executing command: cat /etc/os-release
[2026-05-13 13:48:09] 2026-05-13 11:47:34,529 | INFO     | cat /etc/os-release:
[2026-05-13 13:48:09] NAME="CentOS Linux"
[2026-05-13 13:48:09] VERSION="7 (Core)"
[2026-05-13 13:48:09] ID="centos"
[2026-05-13 13:48:09] ID_LIKE="rhel fedora"
[2026-05-13 13:48:09] VERSION_ID="7"
[2026-05-13 13:48:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 13:48:09] ANSI_COLOR="0;31"
[2026-05-13 13:48:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 13:48:09] HOME_URL="https://www.centos.org/"
[2026-05-13 13:48:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 13:48:09] 
[2026-05-13 13:48:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 13:48:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 13:48:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 13:48:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 13:48:09] 
[2026-05-13 13:48:09] 2026-05-13 11:47:34,529 | INFO     | ***************************************
[2026-05-13 13:48:09] 2026-05-13 11:47:35,032 | INFO     | executing command: df -mP /tmp/job_11604247/atlas/pilot/slots/0
[2026-05-13 13:48:09] 2026-05-13 11:47:35,039 | INFO     | sufficient remaining disk space (229739855872 B)
[2026-05-13 13:48:09] 2026-05-13 11:47:35,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 13:48:09] 2026-05-13 11:47:35,039 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 13:48:09] 2026-05-13 11:47:35,039 | INFO     | update_server=False
[2026-05-13 13:48:09] 2026-05-13 11:47:35,039 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 13:48:09] 2026-05-13 11:47:35,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 13:48:09] 2026-05-13 11:47:35,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 13:48:09] 2026-05-13 11:47:35,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 13:48:09] 2026-05-13 11:47:35,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 13:48:09] 2026-05-13 11:47:35,318 | INFO     | aborting loop
[2026-05-13 13:48:09] 2026-05-13 11:47:35,810 | INFO     | all data control threads have been joined
[2026-05-13 13:48:09] 2026-05-13 11:47:35,893 | INFO     | all payload control threads have been joined
[2026-05-13 13:48:09] 2026-05-13 11:47:35,922 | INFO     | all job control threads have been joined
[2026-05-13 13:48:09] 2026-05-13 11:47:36,044 | INFO     | [job] retrieve thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:36,045 | INFO     | [job] queue monitor thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:36,105 | INFO     | [data] copytool_in thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:36,323 | INFO     | [job] job monitor thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:36,406 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:36,540 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:36,579 | INFO     | [payload] failed_post thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:36,815 | INFO     | [data] control thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:36,898 | INFO     | [payload] control thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:36,928 | INFO     | [job] control thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:37,045 | INFO     | [data] copytool_out thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:37,212 | INFO     | [payload] validate_post thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:37,238 | INFO     | [job] validate thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:37,377 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:37,458 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:47:39,045 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 13:48:09] 2026-05-13 11:48:02,486 | INFO     | [monitor] cgroup control has ended
[2026-05-13 13:48:09] 2026-05-13 11:48:03,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061138688)>']
[2026-05-13 13:48:09] 2026-05-13 11:48:05,650 | INFO     | PID=26181 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-13 13:48:09] 2026-05-13 11:48:05,650 | INFO     | .. there are 3 such processes running
[2026-05-13 13:48:09] 2026-05-13 11:48:05,651 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 13:48:09] 2026-05-13 11:48:05,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 13:48:09] 2026-05-13 11:48:05,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 13:48:09] 2026-05-13 11:48:05,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 13:48:09] 2026-05-13 11:48:05,651 | INFO     | [monitor] control thread has ended
[2026-05-13 13:48:09] 2026-05-13 11:48:08,517 | INFO     | all workflow threads have been joined
[2026-05-13 13:48:09] 2026-05-13 11:48:08,517 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 13:48:09] 2026-05-13 11:48:08,517 | INFO     | traces error code: 0
[2026-05-13 13:48:09] 2026-05-13 11:48:08,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 13:48:09] 2026-05-13 11:48:09,323 [wrapper] ==== pilot stdout END ====
[2026-05-13 13:48:09] 2026-05-13 11:48:09,324 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 13:48:09] 2026-05-13 11:48:09,326 [wrapper] pilotpid: 26181
[2026-05-13 13:48:09] 2026-05-13 11:48:09,327 [wrapper] Pilot exit status: 0
[2026-05-13 13:48:09] 2026-05-13 11:48:09,331 [wrapper] pandaids: 7138064966
[2026-05-13 13:48:09] 2026-05-13 11:48:09,358 [wrapper] cleanup supervisor_pilot 26188 26182
[2026-05-13 13:48:09] 2026-05-13 11:48:09,360 [wrapper] Test setup, not cleaning
[2026-05-13 13:48:09] 2026-05-13 11:48:09,361 [wrapper] apfmon messages muted
[2026-05-13 13:48:09] 2026-05-13 11:48:09,362 [wrapper] ==== wrapper stdout END ====
[2026-05-13 13:48:09] 2026-05-13 11:48:09,363 [wrapper] ==== wrapper stderr END ====
[2026-05-13 13:48:09]  *** Error codes and diagnostics ***
[2026-05-13 13:48:09]     "exeErrorCode": 65,
[2026-05-13 13:48:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 13:48:09]     "pilotErrorCode": 1305,
[2026-05-13 13:48:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-13 13:48:09]  *** Listing of results directory ***
[2026-05-13 13:48:09] total 103732
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user    683926 May 13 12:02 pilot3.tar.gz
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user      5631 May 13 12:09 queuedata.json
[2026-05-13 13:48:09] -rwx------ 1 mf493845 unix-user     36281 May 13 12:11 runpilot2-wrapper.sh
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user       100 May 13 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 13:48:09] -rwxr-xr-x 1 mf493845 unix-user      7986 May 13 13:18 run_atlas
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user       105 May 13 13:18 job.xml
[2026-05-13 13:48:09] -rw-r--r-- 2 mf493845 unix-user 101914010 May 13 13:44 EVNT.50238157._000201.pool.root.1
[2026-05-13 13:48:09] -rw-r--r-- 2 mf493845 unix-user     15667 May 13 13:44 start_atlas.sh
[2026-05-13 13:48:09] drwxrwx--x 2 mf493845 unix-user       100 May 13 13:44 shared
[2026-05-13 13:48:09] -rw-r--r-- 2 mf493845 unix-user    697433 May 13 13:44 input.tar.gz
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user      6308 May 13 13:44 init_data.xml
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user         0 May 13 13:44 boinc_setup_complete
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user      8192 May 13 13:44 boinc_mmap_file
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user         0 May 13 13:44 boinc_lockfile
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user      2560 May 13 13:44 pandaJob.out
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user    998466 May 13 13:45 agis_schedconf.cvmfs.json
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user   1502367 May 13 13:45 agis_ddmendpoints.agis.ALL.json
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user       419 May 13 13:45 workernode_map.json
[2026-05-13 13:48:09] drwx------ 5 mf493845 unix-user       520 May 13 13:45 pilot3
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user       936 May 13 13:45 memory_monitor_summary.json
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user     22475 May 13 13:45 log.50250192._005013.job.log.tgz.1
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user      6996 May 13 13:47 heartbeat_new.json
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user      6957 May 13 13:47 heartbeat.json
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user        95 May 13 13:48 pilot_heartbeat.json
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user      4834 May 13 13:48 pilotlog.txt
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user     82085 May 13 13:48 log.50250192._005013.job.log.1
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user       188 May 13 13:48 output.list
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user       410 May 13 13:48 runtime_log
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user    122880 May 13 13:48 result.tar.gz
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user      8689 May 13 13:48 runtime_log.err
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user       632 May 13 13:48 4e65d022d6dc.diag
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user     22091 May 13 13:48 stderr.txt
[2026-05-13 13:48:09] No HITS result produced
[2026-05-13 13:48:09]  *** Contents of shared directory: ***
[2026-05-13 13:48:09] total 100348
[2026-05-13 13:48:09] -rw-r--r-- 2 mf493845 unix-user 101914010 May 13 13:44 ATLAS.root_0
[2026-05-13 13:48:09] -rw-r--r-- 2 mf493845 unix-user     15667 May 13 13:44 start_atlas.sh
[2026-05-13 13:48:09] -rw-r--r-- 2 mf493845 unix-user    697433 May 13 13:44 input.tar.gz
[2026-05-13 13:48:09] -rw------- 1 mf493845 unix-user    122880 May 13 13:48 result.tar.gz
13:48:10 (21290): run_atlas exited; CPU time 12.028130
13:48:10 (21290): called boinc_finish(0)

</stderr_txt>
]]>

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