Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
03:17:13 (4090): wrapper (7.7.26015): starting
03:17:13 (4090): wrapper: running run_atlas (--nthreads 4)
[2026-05-13 03:17:13] Arguments: --nthreads 4
[2026-05-13 03:17:13] Threads: 4
[2026-05-13 03:17:13] Checking for CVMFS
[2026-05-13 03:17:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-13 03:17:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-13 03:17:44] Running cvmfs_config stat atlas.cern.ch
[2026-05-13 03:17:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-13 03:17:44] 2.12.7.0 4311 0 25400 159469 3 1 3246390 4194305 0 130560 0 0 0.000 1282 1118 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-05-13 03:17:44] CVMFS is ok
[2026-05-13 03:17:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 03:17:44] Checking for apptainer binary...
[2026-05-13 03:17:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-13 03:17:44] Running /usr/bin/apptainer --version
[2026-05-13 03:17:44] apptainer version 1.0.3
[2026-05-13 03:17:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 03:17:47] TeeC38
[2026-05-13 03:17:47] apptainer works
[2026-05-13 03:17:47] Set ATHENA_PROC_NUMBER=4
[2026-05-13 03:17:47] Set ATHENA_CORE_NUMBER=4
[2026-05-13 03:17:47] Starting ATLAS job with PandaID=7136358437
[2026-05-13 03:17:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 05:42:59]  *** The last 200 lines of the pilot log: ***
[2026-05-13 05:42:59] 2026-05-13 04:42:08,263 | INFO     | stage-out finished correctly
[2026-05-13 05:42:59] 2026-05-13 04:42:08,814 | INFO     | monitor loop #657: job 0:7136358437 is in state 'finished'
[2026-05-13 05:42:59] 2026-05-13 04:42:08,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-13 05:42:59] 2026-05-13 04:42:09,321 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-13 05:42:59] 2026-05-13 04:42:10,446 | INFO     | job 7136358437 has state=finished
[2026-05-13 05:42:59] 2026-05-13 04:42:10,446 | INFO     | preparing for final server update for job 7136358437 in state='finished'
[2026-05-13 05:42:59] 2026-05-13 04:42:10,447 | INFO     | reading metadata from: /home/m/BOINC/slots/1/PanDA_Pilot-7136358437/jobReport.json
[2026-05-13 05:42:59] 2026-05-13 04:42:10,451 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/1/workernode_map.json
[2026-05-13 05:42:59] 2026-05-13 04:42:10,452 | INFO     | this job has now completed (state=finished)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,452 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,452 | INFO     | log transfer has been attempted: DONE
[2026-05-13 05:42:59] 2026-05-13 04:42:10,452 | INFO     | job 7136358437 has finished - writing final server update
[2026-05-13 05:42:59] 2026-05-13 04:42:10,452 | INFO     | total number of processed events: 400 (read)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,471 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-7136358437/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,472 | INFO     | extracted standard info from prmon json
[2026-05-13 05:42:59] 2026-05-13 04:42:10,472 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 05:42:59] 2026-05-13 04:42:10,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 05:42:59] 2026-05-13 04:42:10,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 05:42:59] 2026-05-13 04:42:10,474 | INFO     | fitting pss+swap vs Time
[2026-05-13 05:42:59] 2026-05-13 04:42:10,474 | INFO     | sum of square deviations: 869193148.9929086
[2026-05-13 05:42:59] 2026-05-13 04:42:10,475 | INFO     | sum of deviations: -37340281942.3617
[2026-05-13 05:42:59] 2026-05-13 04:42:10,475 | INFO     | mean x (centered): 0.0
[2026-05-13 05:42:59] 2026-05-13 04:42:10,475 | INFO     | mean y: 2504001.361702128
[2026-05-13 05:42:59] 2026-05-13 04:42:10,475 | INFO     | intersect: 2504001.361702128
[2026-05-13 05:42:59] 2026-05-13 04:42:10,475 | INFO     | chi2: 1.7842045791455445
[2026-05-13 05:42:59] 2026-05-13 04:42:10,475 | INFO     | sum of square deviations: 779963873.9926479
[2026-05-13 05:42:59] 2026-05-13 04:42:10,476 | INFO     | sum of deviations: -34800830969.39706
[2026-05-13 05:42:59] 2026-05-13 04:42:10,476 | INFO     | mean x (centered): 0.0
[2026-05-13 05:42:59] 2026-05-13 04:42:10,476 | INFO     | mean y: 2508343.3970588236
[2026-05-13 05:42:59] 2026-05-13 04:42:10,476 | INFO     | intersect: 2508343.3970588236
[2026-05-13 05:42:59] 2026-05-13 04:42:10,476 | INFO     | chi2: 1.7750896828151903
[2026-05-13 05:42:59] 2026-05-13 04:42:10,476 | INFO     | current chi2=1.7750896828151903 (change=0.510866098926803 %)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,476 | INFO     | right removable region: 135
[2026-05-13 05:42:59] 2026-05-13 04:42:10,477 | INFO     | sum of square deviations: 779963263.9926479
[2026-05-13 05:42:59] 2026-05-13 04:42:10,477 | INFO     | sum of deviations: -55653135530.68381
[2026-05-13 05:42:59] 2026-05-13 04:42:10,477 | INFO     | mean x (centered): 0.0
[2026-05-13 05:42:59] 2026-05-13 04:42:10,477 | INFO     | mean y: 2534627.1838235296
[2026-05-13 05:42:59] 2026-05-13 04:42:10,477 | INFO     | intersect: 2534627.1838235296
[2026-05-13 05:42:59] 2026-05-13 04:42:10,477 | INFO     | chi2: 0.2765856846424081
[2026-05-13 05:42:59] 2026-05-13 04:42:10,477 | INFO     | current chi2=0.2765856846424081 (change=84.49809579712742 %)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,478 | INFO     | sum of square deviations: 697059078.9923683
[2026-05-13 05:42:59] 2026-05-13 04:42:10,478 | INFO     | sum of deviations: -50910342052.137375
[2026-05-13 05:42:59] 2026-05-13 04:42:10,478 | INFO     | mean x (centered): 0.0
[2026-05-13 05:42:59] 2026-05-13 04:42:10,478 | INFO     | mean y: 2525888.13740458
[2026-05-13 05:42:59] 2026-05-13 04:42:10,478 | INFO     | intersect: 2525888.13740458
[2026-05-13 05:42:59] 2026-05-13 04:42:10,479 | INFO     | chi2: 0.2746439957238448
[2026-05-13 05:42:59] 2026-05-13 04:42:10,479 | INFO     | current chi2=0.2746439957238448 (change=0.7020207575362054 %)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,479 | INFO     | left removable region: 10
[2026-05-13 05:42:59] 2026-05-13 04:42:10,479 | INFO     | sum of square deviations: 605597264.9920013
[2026-05-13 05:42:59] 2026-05-13 04:42:10,479 | INFO     | sum of deviations: -47553489737.616005
[2026-05-13 05:42:59] 2026-05-13 04:42:10,479 | INFO     | mean x (centered): 0.0
[2026-05-13 05:42:59] 2026-05-13 04:42:10,480 | INFO     | mean y: 2532609.616
[2026-05-13 05:42:59] 2026-05-13 04:42:10,480 | INFO     | intersect: 2532609.616
[2026-05-13 05:42:59] 2026-05-13 04:42:10,480 | INFO     | chi2: 0.25208714750720845
[2026-05-13 05:42:59] 2026-05-13 04:42:10,480 | INFO     | current memory leak: -78.52 B/s (using 125 data points, chi2=0.25)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,480 | INFO     | could have reported an average CPU frequency of 3200 MHz (8 samples)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,480 | INFO     | ..............................
[2026-05-13 05:42:59] 2026-05-13 04:42:10,480 | INFO     | . Timing measurements:
[2026-05-13 05:42:59] 2026-05-13 04:42:10,481 | INFO     | . get job = 0 s
[2026-05-13 05:42:59] 2026-05-13 04:42:10,481 | INFO     | . initial setup = 17 s
[2026-05-13 05:42:59] 2026-05-13 04:42:10,481 | INFO     | . payload setup = 7 s
[2026-05-13 05:42:59] 2026-05-13 04:42:10,481 | INFO     | . stage-in = 0 s
[2026-05-13 05:42:59] 2026-05-13 04:42:10,481 | INFO     | . payload execution = 8587 s
[2026-05-13 05:42:59] 2026-05-13 04:42:10,481 | INFO     | . stage-out = 0 s
[2026-05-13 05:42:59] 2026-05-13 04:42:10,481 | INFO     | . log creation = 0 s
[2026-05-13 05:42:59] 2026-05-13 04:42:10,481 | INFO     | ..............................
[2026-05-13 05:42:59] 2026-05-13 04:42:10,564 | INFO     | PID=8389 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-13 05:42:59] 2026-05-13 04:42:10,783 | INFO     | 
[2026-05-13 05:42:59] 2026-05-13 04:42:10,784 | INFO     | job summary report
[2026-05-13 05:42:59] 2026-05-13 04:42:10,784 | INFO     | --------------------------------------------------
[2026-05-13 05:42:59] 2026-05-13 04:42:10,784 | INFO     | PanDA job id: 7136358437
[2026-05-13 05:42:59] 2026-05-13 04:42:10,784 | INFO     | task id: 50010673
[2026-05-13 05:42:59] 2026-05-13 04:42:10,784 | INFO     | errors: (none)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,785 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 05:42:59] 2026-05-13 04:42:10,785 | INFO     | pilot state: finished 
[2026-05-13 05:42:59] 2026-05-13 04:42:10,785 | INFO     | transexitcode: 0
[2026-05-13 05:42:59] 2026-05-13 04:42:10,785 | INFO     | exeerrorcode: 0
[2026-05-13 05:42:59] 2026-05-13 04:42:10,785 | INFO     | exeerrordiag: 
[2026-05-13 05:42:59] 2026-05-13 04:42:10,785 | INFO     | exitcode: 0
[2026-05-13 05:42:59] 2026-05-13 04:42:10,786 | INFO     | exitmsg: OK
[2026-05-13 05:42:59] 2026-05-13 04:42:10,786 | INFO     | cpuconsumptiontime: 33105 s
[2026-05-13 05:42:59] 2026-05-13 04:42:10,786 | INFO     | nevents: 400
[2026-05-13 05:42:59] 2026-05-13 04:42:10,786 | INFO     | neventsw: 0
[2026-05-13 05:42:59] 2026-05-13 04:42:10,786 | INFO     | pid: 12771
[2026-05-13 05:42:59] 2026-05-13 04:42:10,786 | INFO     | pgrp: 12771
[2026-05-13 05:42:59] 2026-05-13 04:42:10,787 | INFO     | corecount: 4
[2026-05-13 05:42:59] 2026-05-13 04:42:10,787 | INFO     | event service: False
[2026-05-13 05:42:59] 2026-05-13 04:42:10,787 | INFO     | sizes: {0: 2265773, 1: 2267403, 11: 2267431, 8598: 2295318, 8599: 2304314, 8600: 2304370, 8601: 2304692}
[2026-05-13 05:42:59] 2026-05-13 04:42:10,787 | INFO     | --------------------------------------------------
[2026-05-13 05:42:59] 2026-05-13 04:42:10,787 | INFO     | 
[2026-05-13 05:42:59] 2026-05-13 04:42:10,788 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2026-05-13 05:42:59] 2026-05-13 04:42:10,822 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,822 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,822 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,822 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | job 7136358437 has completed (purged errors)
[2026-05-13 05:42:59] 2026-05-13 04:42:10,823 | INFO     | overall cleanup function is called
[2026-05-13 05:42:59] 2026-05-13 04:42:11,830 | INFO     | --- collectZombieJob: --- 10, [12771]
[2026-05-13 05:42:59] 2026-05-13 04:42:11,832 | INFO     | zombie collector waiting for pid 12771
[2026-05-13 05:42:59] 2026-05-13 04:42:11,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 05:42:59] 2026-05-13 04:42:11,832 | INFO     | collected zombie processes
[2026-05-13 05:42:59] 2026-05-13 04:42:11,832 | INFO     | will attempt to kill all subprocesses of pid=12771
[2026-05-13 05:42:59] 2026-05-13 04:42:11,885 | INFO     | process IDs to be killed: [12771] (in reverse order)
[2026-05-13 05:42:59] 2026-05-13 04:42:11,915 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 05:42:59] 2026-05-13 04:42:11,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 05:42:59] 2026-05-13 04:42:11,917 | INFO     | did not find any defunct processes belonging to 12771
[2026-05-13 05:42:59] 2026-05-13 04:42:11,918 | INFO     | did not find any defunct processes belonging to 12771
[2026-05-13 05:42:59] 2026-05-13 04:42:11,918 | INFO     | Ready for new job
[2026-05-13 05:42:59] 2026-05-13 04:42:11,920 | INFO     | ***************************************
[2026-05-13 05:42:59] 2026-05-13 04:42:11,920 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 05:42:59] 2026-05-13 04:42:11,920 | INFO     | ***************************************
[2026-05-13 05:42:59] 2026-05-13 04:42:11,920 | INFO     | 
[2026-05-13 05:42:59] 2026-05-13 04:42:11,939 | INFO     | architecture information:
[2026-05-13 05:42:59] 2026-05-13 04:42:11,939 | INFO     | executing command: cat /etc/os-release
[2026-05-13 05:42:59] 2026-05-13 04:42:11,948 | INFO     | cat /etc/os-release:
[2026-05-13 05:42:59] NAME="CentOS Linux"
[2026-05-13 05:42:59] VERSION="7 (Core)"
[2026-05-13 05:42:59] ID="centos"
[2026-05-13 05:42:59] ID_LIKE="rhel fedora"
[2026-05-13 05:42:59] VERSION_ID="7"
[2026-05-13 05:42:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 05:42:59] ANSI_COLOR="0;31"
[2026-05-13 05:42:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 05:42:59] HOME_URL="https://www.centos.org/"
[2026-05-13 05:42:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 05:42:59] 
[2026-05-13 05:42:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 05:42:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 05:42:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 05:42:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 05:42:59] 
[2026-05-13 05:42:59] 2026-05-13 04:42:11,948 | INFO     | ***************************************
[2026-05-13 05:42:59] 2026-05-13 04:42:12,452 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2026-05-13 05:42:59] 2026-05-13 04:42:12,468 | INFO     | sufficient remaining disk space (429463175168 B)
[2026-05-13 05:42:59] 2026-05-13 04:42:12,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 05:42:59] 2026-05-13 04:42:12,468 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 05:42:59] 2026-05-13 04:42:12,468 | INFO     | update_server=False
[2026-05-13 05:42:59] 2026-05-13 04:42:12,468 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 05:42:59] 2026-05-13 04:42:12,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 05:42:59] 2026-05-13 04:42:12,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 05:42:59] 2026-05-13 04:42:12,469 | INFO     | aborting loop
[2026-05-13 05:42:59] 2026-05-13 04:42:12,500 | INFO     | all data control threads have been joined
[2026-05-13 05:42:59] 2026-05-13 04:42:13,358 | INFO     | all job control threads have been joined
[2026-05-13 05:42:59] 2026-05-13 04:42:13,474 | INFO     | [job] retrieve thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:13,475 | INFO     | [job] queue monitor thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:13,476 | INFO     | [job] job monitor thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:13,506 | INFO     | [data] control thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:13,592 | INFO     | all payload control threads have been joined
[2026-05-13 05:42:59] 2026-05-13 04:42:13,661 | INFO     | [payload] validate_post thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:13,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 05:42:59] 2026-05-13 04:42:13,863 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:13,925 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:13,925 | INFO     | [data] copytool_in thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:14,364 | INFO     | [job] control thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:14,598 | INFO     | [payload] control thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:14,635 | INFO     | [payload] failed_post thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:14,713 | INFO     | [job] validate thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:14,820 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:14,961 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:15,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 05:42:59] 2026-05-13 04:42:15,827 | INFO     | [data] copytool_out thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:19,382 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 05:42:59] 2026-05-13 04:42:42,671 | INFO     | PID=8389 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-13 05:42:59] 2026-05-13 04:42:42,672 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 05:42:59] 2026-05-13 04:42:42,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 05:42:59] 2026-05-13 04:42:42,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 05:42:59] 2026-05-13 04:42:52,215 | INFO     | [monitor] cgroup control has ended
[2026-05-13 05:42:59] 2026-05-13 04:42:54,153 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140487088908096)>', '<ExcThread(monitor, started 140486425700096)>']
[2026-05-13 05:42:59] 2026-05-13 04:42:54,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 05:42:59] 2026-05-13 04:42:54,734 | INFO     | [monitor] control thread has ended
[2026-05-13 05:42:59] 2026-05-13 04:42:59,179 | INFO     | all workflow threads have been joined
[2026-05-13 05:42:59] 2026-05-13 04:42:59,180 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 05:42:59] 2026-05-13 04:42:59,180 | INFO     | traces error code: 0
[2026-05-13 05:42:59] 2026-05-13 04:42:59,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 05:42:59] 2026-05-13 04:42:59,276 [wrapper] ==== pilot stdout END ====
[2026-05-13 05:42:59] 2026-05-13 04:42:59,278 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 05:42:59] 2026-05-13 04:42:59,280 [wrapper] pilotpid: 8389
[2026-05-13 05:42:59] 2026-05-13 04:42:59,281 [wrapper] Pilot exit status: 0
[2026-05-13 05:42:59] 2026-05-13 04:42:59,309 [wrapper] pandaids: 7136358437
[2026-05-13 05:42:59] 2026-05-13 04:42:59,325 [wrapper] cleanup supervisor_pilot   18644 8390
[2026-05-13 05:42:59] 2026-05-13 04:42:59,327 [wrapper] Test setup, not cleaning
[2026-05-13 05:42:59] 2026-05-13 04:42:59,329 [wrapper] apfmon messages muted
[2026-05-13 05:42:59] 2026-05-13 04:42:59,332 [wrapper] ==== wrapper stdout END ====
[2026-05-13 05:42:59] 2026-05-13 04:42:59,333 [wrapper] ==== wrapper stderr END ====
[2026-05-13 05:42:59]  *** Error codes and diagnostics ***
[2026-05-13 05:42:59]     "exeErrorCode": 0,
[2026-05-13 05:42:59]     "pilotErrorCode": 0,
[2026-05-13 05:42:59]  *** Listing of results directory ***
[2026-05-13 05:42:59] total 408304
[2026-05-13 05:42:59] -rw-r--r-- 1 m m    683926 May 11 09:12 pilot3.tar.gz
[2026-05-13 05:42:59] -rw-r--r-- 1 m m      5631 May 11 09:39 queuedata.json
[2026-05-13 05:42:59] -rwx------ 1 m m     36281 May 11 09:41 runpilot2-wrapper.sh
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m       100 May 13 03:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 05:42:59] -rwxr-xr-x 1 m m      7986 May 13 03:17 run_atlas
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m       105 May 13 03:17 job.xml
[2026-05-13 05:42:59] -rw-r--r-- 2 m m     15667 May 13 03:17 start_atlas.sh
[2026-05-13 05:42:59] drwxrwx--x 2 m m      4096 May 13 03:17 shared
[2026-05-13 05:42:59] -rw-r--r-- 2 m m    697408 May 13 03:17 input.tar.gz
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m      5872 May 13 03:17 init_data.xml
[2026-05-13 05:42:59] -rw-r--r-- 2 m m 242404562 May 13 03:17 EVNT.50010670._000069.pool.root.1
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m         0 May 13 03:17 boinc_lockfile
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m      2508 May 13 03:17 pandaJob.out
[2026-05-13 05:42:59] -rw------- 1 m m    998030 May 13 03:18 agis_schedconf.cvmfs.json
[2026-05-13 05:42:59] -rw------- 1 m m   1502367 May 13 03:18 agis_ddmendpoints.agis.ALL.json
[2026-05-13 05:42:59] -rw------- 1 m m       412 May 13 03:18 workernode_map.json
[2026-05-13 05:42:59] drwx------ 5 m m      4096 May 13 03:18 pilot3
[2026-05-13 05:42:59] -rw------- 1 m m 169394726 May 13 05:41 HITS.50010673._002784.pool.root.1
[2026-05-13 05:42:59] -rw------- 1 m m      1011 May 13 05:42 memory_monitor_summary.json
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m       487 May 13 05:42 boinc_task_state.xml
[2026-05-13 05:42:59] -rw------- 1 m m    284431 May 13 05:42 log.50010673._002784.job.log.tgz.1
[2026-05-13 05:42:59] -rw------- 1 m m      6306 May 13 05:42 heartbeat_new.json
[2026-05-13 05:42:59] -rw------- 1 m m      6197 May 13 05:42 heartbeat.json
[2026-05-13 05:42:59] -rw------- 1 m m        95 May 13 05:42 pilot_heartbeat.json
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m        27 May 13 05:42 wrapper_checkpoint.txt
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m      8192 May 13 05:42 boinc_mmap_file
[2026-05-13 05:42:59] -rw------- 1 m m      4744 May 13 05:42 pilotlog.txt
[2026-05-13 05:42:59] -rw------- 1 m m    803197 May 13 05:42 log.50010673._002784.job.log.1
[2026-05-13 05:42:59] -rw------- 1 m m       357 May 13 05:42 output.list
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m       410 May 13 05:42 runtime_log
[2026-05-13 05:42:59] -rw------- 1 m m   1105920 May 13 05:42 result.tar.gz
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m      8351 May 13 05:42 runtime_log.err
[2026-05-13 05:42:59] -rw------- 1 m m       636 May 13 05:42 963234dc0c6e.diag
[2026-05-13 05:42:59] -rw-rw-r-- 1 m m     20962 May 13 05:42 stderr.txt
[2026-05-13 05:42:59] HITS file was successfully produced:
[2026-05-13 05:42:59] -rw------- 1 m m 169394726 May 13 05:41 shared/HITS.pool.root.1
[2026-05-13 05:42:59]  *** Contents of shared directory: ***
[2026-05-13 05:42:59] total 403940
[2026-05-13 05:42:59] -rw-r--r-- 2 m m     15667 May 13 03:17 start_atlas.sh
[2026-05-13 05:42:59] -rw-r--r-- 2 m m    697408 May 13 03:17 input.tar.gz
[2026-05-13 05:42:59] -rw-r--r-- 2 m m 242404562 May 13 03:17 ATLAS.root_0
[2026-05-13 05:42:59] -rw------- 1 m m 169394726 May 13 05:41 HITS.pool.root.1
[2026-05-13 05:42:59] -rw------- 1 m m   1105920 May 13 05:42 result.tar.gz
05:43:01 (4090): run_atlas exited; CPU time 33178.865906
05:43:01 (4090): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN