Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:29:31 (12295): wrapper (7.7.26015): starting
18:29:31 (12295): wrapper: running run_atlas (--nthreads 8)
[2026-05-11 18:29:31] Arguments: --nthreads 8
[2026-05-11 18:29:31] Threads: 8
[2026-05-11 18:29:31] Checking for CVMFS
[2026-05-11 18:29:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-11 18:29:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-11 18:29:35] Running cvmfs_config stat atlas.cern.ch
[2026-05-11 18:29:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-11 18:29:36] 2.11.2.0 24528 37390 109860 159443 3 432 13596988 25165825 967 130560 0 23032901 99.968 6873465 7896 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-11 18:29:36] CVMFS is ok
[2026-05-11 18:29:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-11 18:29:36] Checking for apptainer binary...
[2026-05-11 18:29:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-11 18:29:36] Running /usr/bin/apptainer --version
[2026-05-11 18:29:36] apptainer version 1.3.2-1.el7
[2026-05-11 18:29:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-11 18:29:55] cg-vwn413.simple-grid.lan
[2026-05-11 18:29:55] apptainer works
[2026-05-11 18:29:55] Set ATHENA_PROC_NUMBER=8
[2026-05-11 18:29:55] Set ATHENA_CORE_NUMBER=8
[2026-05-11 18:29:55] Starting ATLAS job with PandaID=7136357855
[2026-05-11 18:29:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-11 22:04:20]  *** The last 200 lines of the pilot log: ***
[2026-05-11 22:04:20] 2026-05-11 20:03:13,310 | INFO     | mean x (centered): 0.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,310 | INFO     | mean y: 2756025.652849741
[2026-05-11 22:04:20] 2026-05-11 20:03:13,310 | INFO     | intersect: 2756025.652849741
[2026-05-11 22:04:20] 2026-05-11 20:03:13,310 | INFO     | chi2: 2.37170664041785
[2026-05-11 22:04:20] 2026-05-11 20:03:13,311 | INFO     | current chi2=2.37170664041785 (change=68.64566334848658 %)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,311 | INFO     | sum of square deviations: 2060343747.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,312 | INFO     | sum of deviations: 20894791007.500004
[2026-05-11 22:04:20] 2026-05-11 20:03:13,312 | INFO     | mean x (centered): 0.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,313 | INFO     | mean y: 2802455.111702128
[2026-05-11 22:04:20] 2026-05-11 20:03:13,313 | INFO     | intersect: 2802455.111702128
[2026-05-11 22:04:20] 2026-05-11 20:03:13,313 | INFO     | chi2: 0.1320022757445141
[2026-05-11 22:04:20] 2026-05-11 20:03:13,313 | INFO     | current chi2=0.1320022757445141 (change=94.43429159850655 %)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,314 | INFO     | sum of square deviations: 1900284932.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,315 | INFO     | sum of deviations: 7606655165.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,315 | INFO     | mean x (centered): 0.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,315 | INFO     | mean y: 2815075.9781420766
[2026-05-11 22:04:20] 2026-05-11 20:03:13,315 | INFO     | intersect: 2815075.9781420766
[2026-05-11 22:04:20] 2026-05-11 20:03:13,316 | INFO     | chi2: 0.001719656320389469
[2026-05-11 22:04:20] 2026-05-11 20:03:13,316 | INFO     | current chi2=0.001719656320389469 (change=98.69725252031427 %)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,316 | INFO     | sum of square deviations: 1748737904.5
[2026-05-11 22:04:20] 2026-05-11 20:03:13,318 | INFO     | sum of deviations: 5949848896.5
[2026-05-11 22:04:20] 2026-05-11 20:03:13,318 | INFO     | mean x (centered): 0.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,318 | INFO     | mean y: 2816736.061797753
[2026-05-11 22:04:20] 2026-05-11 20:03:13,318 | INFO     | intersect: 2816736.061797753
[2026-05-11 22:04:20] 2026-05-11 20:03:13,318 | INFO     | chi2: 0.0005271552588171268
[2026-05-11 22:04:20] 2026-05-11 20:03:13,319 | INFO     | current chi2=0.0005271552588171268 (change=69.34531321364629 %)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,319 | INFO     | sum of square deviations: 1605470102.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,320 | INFO     | sum of deviations: 5074120300.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,320 | INFO     | mean x (centered): 0.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,320 | INFO     | mean y: 2817666.3005780345
[2026-05-11 22:04:20] 2026-05-11 20:03:13,321 | INFO     | intersect: 2817666.3005780345
[2026-05-11 22:04:20] 2026-05-11 20:03:13,321 | INFO     | chi2: 0.00036908319029209234
[2026-05-11 22:04:20] 2026-05-11 20:03:13,321 | INFO     | current chi2=0.00036908319029209234 (change=29.985865811095046 %)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,321 | INFO     | sum of square deviations: 1470248962.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,323 | INFO     | sum of deviations: 4379198448.499999
[2026-05-11 22:04:20] 2026-05-11 20:03:13,323 | INFO     | mean x (centered): 0.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,323 | INFO     | mean y: 2818449.994047619
[2026-05-11 22:04:20] 2026-05-11 20:03:13,323 | INFO     | intersect: 2818449.994047619
[2026-05-11 22:04:20] 2026-05-11 20:03:13,323 | INFO     | chi2: 0.00029566441625985905
[2026-05-11 22:04:20] 2026-05-11 20:03:13,324 | INFO     | current chi2=0.00029566441625985905 (change=19.892202073502638 %)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,324 | INFO     | left removable region: 30
[2026-05-11 22:04:20] 2026-05-11 20:03:13,324 | INFO     | sum of square deviations: 1318277740.5
[2026-05-11 22:04:20] 2026-05-11 20:03:13,325 | INFO     | sum of deviations: 3973530087.5000005
[2026-05-11 22:04:20] 2026-05-11 20:03:13,325 | INFO     | mean x (centered): 0.0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,325 | INFO     | mean y: 2817961.141975309
[2026-05-11 22:04:20] 2026-05-11 20:03:13,326 | INFO     | intersect: 2817961.141975309
[2026-05-11 22:04:20] 2026-05-11 20:03:13,326 | INFO     | chi2: 0.0002934005688799616
[2026-05-11 22:04:20] 2026-05-11 20:03:13,326 | INFO     | current memory leak: 3.01 B/s (using 162 data points, chi2=0.00)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,327 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,327 | INFO     | ..............................
[2026-05-11 22:04:20] 2026-05-11 20:03:13,327 | INFO     | . Timing measurements:
[2026-05-11 22:04:20] 2026-05-11 20:03:13,327 | INFO     | . get job = 0 s
[2026-05-11 22:04:20] 2026-05-11 20:03:13,328 | INFO     | . initial setup = 117 s
[2026-05-11 22:04:20] 2026-05-11 20:03:13,328 | INFO     | . payload setup = 245 s
[2026-05-11 22:04:20] 2026-05-11 20:03:13,328 | INFO     | . stage-in = 0 s
[2026-05-11 22:04:20] 2026-05-11 20:03:13,328 | INFO     | . payload execution = 12174 s
[2026-05-11 22:04:20] 2026-05-11 20:03:13,328 | INFO     | . stage-out = 1 s
[2026-05-11 22:04:20] 2026-05-11 20:03:13,328 | INFO     | . log creation = 0 s
[2026-05-11 22:04:20] 2026-05-11 20:03:13,328 | INFO     | ..............................
[2026-05-11 22:04:20] 2026-05-11 20:03:13,505 | WARNING  | process 20854 can no longer be monitored (due to stat problems) - aborting
[2026-05-11 22:04:20] 2026-05-11 20:03:13,509 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7136357855/memory_monitor_summary.json (trf name=prmon)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,564 | INFO     | number of running child processes to parent process 20854: 1
[2026-05-11 22:04:20] 2026-05-11 20:03:13,564 | INFO     | maximum number of monitored processes: 10
[2026-05-11 22:04:20] 2026-05-11 20:03:13,564 | INFO     | aborting job monitoring since job object (job id=7136357855) has expired
[2026-05-11 22:04:20] 2026-05-11 20:03:13,829 | INFO     | 
[2026-05-11 22:04:20] 2026-05-11 20:03:13,830 | INFO     | job summary report
[2026-05-11 22:04:20] 2026-05-11 20:03:13,830 | INFO     | --------------------------------------------------
[2026-05-11 22:04:20] 2026-05-11 20:03:13,830 | INFO     | PanDA job id: 7136357855
[2026-05-11 22:04:20] 2026-05-11 20:03:13,830 | INFO     | task id: 50010673
[2026-05-11 22:04:20] 2026-05-11 20:03:13,830 | INFO     | errors: (none)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,830 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-11 22:04:20] 2026-05-11 20:03:13,831 | INFO     | pilot state: finished 
[2026-05-11 22:04:20] 2026-05-11 20:03:13,831 | INFO     | transexitcode: 0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,831 | INFO     | exeerrorcode: 0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,831 | INFO     | exeerrordiag: 
[2026-05-11 22:04:20] 2026-05-11 20:03:13,831 | INFO     | exitcode: 0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,831 | INFO     | exitmsg: OK
[2026-05-11 22:04:20] 2026-05-11 20:03:13,831 | INFO     | cpuconsumptiontime: 48902 s
[2026-05-11 22:04:20] 2026-05-11 20:03:13,831 | INFO     | nevents: 400
[2026-05-11 22:04:20] 2026-05-11 20:03:13,831 | INFO     | neventsw: 0
[2026-05-11 22:04:20] 2026-05-11 20:03:13,831 | INFO     | pid: 20854
[2026-05-11 22:04:20] 2026-05-11 20:03:13,832 | INFO     | pgrp: 20854
[2026-05-11 22:04:20] 2026-05-11 20:03:13,832 | INFO     | corecount: 8
[2026-05-11 22:04:20] 2026-05-11 20:03:13,832 | INFO     | event service: False
[2026-05-11 22:04:20] 2026-05-11 20:03:13,832 | INFO     | sizes: {0: 2264946, 1: 2266005, 2: 2267461, 13: 2267461, 12422: 2297389, 12423: 2297388, 12424: 2306572, 12425: 2306628, 12427: 2306822}
[2026-05-11 22:04:20] 2026-05-11 20:03:13,832 | INFO     | --------------------------------------------------
[2026-05-11 22:04:20] 2026-05-11 20:03:13,832 | INFO     | 
[2026-05-11 22:04:20] 2026-05-11 20:03:13,832 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-05-11 22:04:20] 2026-05-11 20:03:13,863 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,864 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,864 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,864 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,866 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,866 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-11 22:04:20] 2026-05-11 20:03:13,866 | INFO     | job 7136357855 has completed (purged errors)
[2026-05-11 22:04:20] 2026-05-11 20:03:13,866 | INFO     | overall cleanup function is called
[2026-05-11 22:04:20] 2026-05-11 20:03:14,874 | INFO     | --- collectZombieJob: --- 10, [20854]
[2026-05-11 22:04:20] 2026-05-11 20:03:14,875 | INFO     | zombie collector waiting for pid 20854
[2026-05-11 22:04:20] 2026-05-11 20:03:14,875 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-11 22:04:20] 2026-05-11 20:03:14,875 | INFO     | collected zombie processes
[2026-05-11 22:04:20] 2026-05-11 20:03:14,875 | INFO     | will attempt to kill all subprocesses of pid=20854
[2026-05-11 22:04:20] 2026-05-11 20:03:14,930 | INFO     | process IDs to be killed: [20854] (in reverse order)
[2026-05-11 22:04:20] 2026-05-11 20:03:14,990 | WARNING  | found no corresponding commands to process id(s)
[2026-05-11 22:04:20] 2026-05-11 20:03:14,990 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-11 22:04:20] 2026-05-11 20:03:14,993 | INFO     | did not find any defunct processes belonging to 20854
[2026-05-11 22:04:20] 2026-05-11 20:03:14,994 | INFO     | did not find any defunct processes belonging to 20854
[2026-05-11 22:04:20] 2026-05-11 20:03:14,995 | INFO     | Ready for new job
[2026-05-11 22:04:20] 2026-05-11 20:03:14,997 | INFO     | ***************************************
[2026-05-11 22:04:20] 2026-05-11 20:03:14,997 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-11 22:04:20] 2026-05-11 20:03:14,997 | INFO     | ***************************************
[2026-05-11 22:04:20] 2026-05-11 20:03:14,997 | INFO     | 
[2026-05-11 22:04:20] 2026-05-11 20:03:14,998 | INFO     | pilot is running in a VM
[2026-05-11 22:04:20] 2026-05-11 20:03:14,998 | INFO     | architecture information:
[2026-05-11 22:04:20] 2026-05-11 20:03:14,998 | INFO     | executing command: cat /etc/os-release
[2026-05-11 22:04:20] 2026-05-11 20:03:15,021 | INFO     | cat /etc/os-release:
[2026-05-11 22:04:20] NAME="CentOS Linux"
[2026-05-11 22:04:20] VERSION="7 (Core)"
[2026-05-11 22:04:20] ID="centos"
[2026-05-11 22:04:20] ID_LIKE="rhel fedora"
[2026-05-11 22:04:20] VERSION_ID="7"
[2026-05-11 22:04:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-11 22:04:20] ANSI_COLOR="0;31"
[2026-05-11 22:04:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-11 22:04:20] HOME_URL="https://www.centos.org/"
[2026-05-11 22:04:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-11 22:04:20] 
[2026-05-11 22:04:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-11 22:04:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-11 22:04:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-11 22:04:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-11 22:04:20] 
[2026-05-11 22:04:20] 2026-05-11 20:03:15,022 | INFO     | ***************************************
[2026-05-11 22:04:20] 2026-05-11 20:03:15,525 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-05-11 22:04:20] 2026-05-11 20:03:15,558 | INFO     | sufficient remaining disk space (498097717248 B)
[2026-05-11 22:04:20] 2026-05-11 20:03:15,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-11 22:04:20] 2026-05-11 20:03:15,559 | INFO     | current server update state: UPDATING_FINAL
[2026-05-11 22:04:20] 2026-05-11 20:03:15,559 | INFO     | update_server=False
[2026-05-11 22:04:20] 2026-05-11 20:03:15,560 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-11 22:04:20] 2026-05-11 20:03:15,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-11 22:04:20] 2026-05-11 20:03:15,560 | INFO     | aborting loop
[2026-05-11 22:04:20] 2026-05-11 20:03:16,001 | INFO     | all job control threads have been joined
[2026-05-11 22:04:20] 2026-05-11 20:03:16,435 | INFO     | all payload control threads have been joined
[2026-05-11 22:04:20] 2026-05-11 20:03:16,508 | INFO     | all data control threads have been joined
[2026-05-11 22:04:20] 2026-05-11 20:03:16,566 | INFO     | [job] retrieve thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:16,566 | INFO     | [job] job monitor thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:16,752 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-11 22:04:20] 2026-05-11 20:03:17,007 | INFO     | [job] control thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:17,099 | INFO     | [job] validate thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:17,154 | INFO     | [payload] validate_post thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:17,183 | INFO     | [data] copytool_in thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:17,189 | INFO     | [payload] validate_pre thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:17,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-11 22:04:20] 2026-05-11 20:03:17,441 | INFO     | [payload] control thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:17,514 | INFO     | [data] control thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:17,518 | INFO     | [payload] failed_post thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:17,609 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:17,678 | INFO     | [payload] execute_payloads thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:17,946 | INFO     | [job] create_data_payload thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:18,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-11 22:04:20] 2026-05-11 20:03:18,758 | INFO     | [data] copytool_out thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:19,474 | INFO     | [job] queue monitor thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:21,367 | INFO     | [data] queue_monitor thread has finished
[2026-05-11 22:04:20] 2026-05-11 20:03:45,551 | INFO     | PID=16379 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-11 22:04:20] 2026-05-11 20:03:45,551 | INFO     | .. there are 2 such processes running
[2026-05-11 22:04:20] 2026-05-11 20:03:45,552 | INFO     | found 0 job(s) in 20 queues
[2026-05-11 22:04:20] 2026-05-11 20:03:45,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-11 22:04:20] 2026-05-11 20:03:45,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-11 22:04:20] 2026-05-11 20:03:52,929 [wrapper] supervise_pilot (15 min periods counter: 15)
[2026-05-11 22:04:20] 2026-05-11 20:04:13,767 | INFO     | [monitor] cgroup control has ended
[2026-05-11 22:04:20] 2026-05-11 20:04:15,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428821956416)>', '<ExcThread(monitor, started 140428158420736)>']
[2026-05-11 22:04:20] 2026-05-11 20:04:15,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-11 22:04:20] 2026-05-11 20:04:15,699 | INFO     | [monitor] control thread has ended
[2026-05-11 22:04:20] 2026-05-11 20:04:20,237 | INFO     | all workflow threads have been joined
[2026-05-11 22:04:20] 2026-05-11 20:04:20,238 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-11 22:04:20] 2026-05-11 20:04:20,238 | INFO     | traces error code: 0
[2026-05-11 22:04:20] 2026-05-11 20:04:20,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-11 22:04:20] 2026-05-11 20:04:20,376 [wrapper] ==== pilot stdout END ====
[2026-05-11 22:04:20] 2026-05-11 20:04:20,381 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-11 22:04:20] 2026-05-11 20:04:20,388 [wrapper] pilotpid: 16379
[2026-05-11 22:04:20] 2026-05-11 20:04:20,397 [wrapper] Pilot exit status: 0
[2026-05-11 22:04:20] 2026-05-11 20:04:20,448 [wrapper] pandaids: 7136357855
[2026-05-11 22:04:20] 2026-05-11 20:04:20,510 [wrapper] cleanup supervisor_pilot 10524 16380
[2026-05-11 22:04:20] 2026-05-11 20:04:20,515 [wrapper] Test setup, not cleaning
[2026-05-11 22:04:20] 2026-05-11 20:04:20,521 [wrapper] apfmon messages muted
[2026-05-11 22:04:20] 2026-05-11 20:04:20,526 [wrapper] ==== wrapper stdout END ====
[2026-05-11 22:04:20] 2026-05-11 20:04:20,530 [wrapper] ==== wrapper stderr END ====
[2026-05-11 22:04:20]  *** Error codes and diagnostics ***
[2026-05-11 22:04:20]     "exeErrorCode": 0,
[2026-05-11 22:04:20]     "pilotErrorCode": 0,
[2026-05-11 22:04:20]  *** Listing of results directory ***
[2026-05-11 22:04:20] total 409040
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc    683926 May 11 10:12 pilot3.tar.gz
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc      5631 May 11 10:39 queuedata.json
[2026-05-11 22:04:20] -rwx------. 1 boinc boinc     36281 May 11 10:40 runpilot2-wrapper.sh
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc       100 May 11 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-11 22:04:20] -rwxr-xr-x. 1 boinc boinc      7986 May 11 18:29 run_atlas
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc       105 May 11 18:29 job.xml
[2026-05-11 22:04:20] -rw-r--r--. 2 boinc boinc 244424271 May 11 18:29 EVNT.50010670._000110.pool.root.1
[2026-05-11 22:04:20] -rw-r--r--. 2 boinc boinc    697407 May 11 18:29 input.tar.gz
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc      6307 May 11 18:29 init_data.xml
[2026-05-11 22:04:20] -rw-r--r--. 2 boinc boinc     15667 May 11 18:29 start_atlas.sh
[2026-05-11 22:04:20] drwxrwx--x. 2 boinc boinc        68 May 11 18:29 shared
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc         0 May 11 18:29 boinc_lockfile
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc      2508 May 11 18:29 pandaJob.out
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc       415 May 11 18:35 workernode_map.json
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc    995511 May 11 18:35 agis_schedconf.cvmfs.json
[2026-05-11 22:04:20] drwx------. 5 boinc boinc      4096 May 11 18:35 pilot3
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc 167244555 May 11 22:02 HITS.50010673._002350.pool.root.1
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc       489 May 11 22:02 boinc_task_state.xml
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc        95 May 11 22:02 pilot_heartbeat.json
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc      1017 May 11 22:03 memory_monitor_summary.json
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc   1502367 May 11 22:03 agis_ddmendpoints.agis.ALL.json
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc    369352 May 11 22:03 log.50010673._002350.job.log.tgz.1
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc      6336 May 11 22:03 heartbeat_new.json
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc      6227 May 11 22:03 heartbeat.json
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc        28 May 11 22:03 wrapper_checkpoint.txt
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc      8192 May 11 22:03 boinc_mmap_file
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc      4884 May 11 22:04 pilotlog.txt
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc   1168611 May 11 22:04 log.50010673._002350.job.log.1
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc       357 May 11 22:04 output.list
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc       410 May 11 22:04 runtime_log
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc   1556480 May 11 22:04 result.tar.gz
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc      8455 May 11 22:04 runtime_log.err
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc       655 May 11 22:04 96186d3df2e5.diag
[2026-05-11 22:04:20] -rw-r--r--. 1 boinc boinc     20709 May 11 22:04 stderr.txt
[2026-05-11 22:04:20] HITS file was successfully produced:
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc 167244555 May 11 22:02 shared/HITS.pool.root.1
[2026-05-11 22:04:20]  *** Contents of shared directory: ***
[2026-05-11 22:04:20] total 404244
[2026-05-11 22:04:20] -rw-r--r--. 2 boinc boinc 244424271 May 11 18:29 ATLAS.root_0
[2026-05-11 22:04:20] -rw-r--r--. 2 boinc boinc    697407 May 11 18:29 input.tar.gz
[2026-05-11 22:04:20] -rw-r--r--. 2 boinc boinc     15667 May 11 18:29 start_atlas.sh
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc 167244555 May 11 22:02 HITS.pool.root.1
[2026-05-11 22:04:20] -rw-------. 1 boinc boinc   1556480 May 11 22:04 result.tar.gz
22:04:22 (12295): run_atlas exited; CPU time 49006.373369
22:04:22 (12295): called boinc_finish(0)

</stderr_txt>
]]>

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