Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:13:55 (3026267): wrapper (7.7.26015): starting
17:13:55 (3026267): wrapper: running run_atlas (--nthreads 4)
[2026-05-11 17:13:55] Arguments: --nthreads 4
[2026-05-11 17:13:55] Threads: 4
[2026-05-11 17:13:55] Checking for CVMFS
[2026-05-11 17:13:55] No cvmfs_config command found, will try listing directly
[2026-05-11 17:13:55] CVMFS is ok
[2026-05-11 17:13:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-11 17:13:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-11 17:13:55] Further information can be found at the LHC@home message board.
[2026-05-11 17:13:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-11 17:13:55] Checking for apptainer binary...
[2026-05-11 17:13:55] which: no apptainer in ((null))
[2026-05-11 17:13:55] apptainer is not installed, using version from CVMFS
[2026-05-11 17:13:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-11 17:13:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-05-11 17:13:55] apptainer works
[2026-05-11 17:13:55] Set ATHENA_PROC_NUMBER=4
[2026-05-11 17:13:55] Set ATHENA_CORE_NUMBER=4
[2026-05-11 17:13:55] Starting ATLAS job with PandaID=7136355081
[2026-05-11 17:13:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-11 18:49:24]  *** The last 200 lines of the pilot log: ***
[2026-05-11 18:49:24]  status=None
[2026-05-11 18:49:24]  status_code=0
[2026-05-11 18:49:24]  storage_token=
[2026-05-11 18:49:24]  surl=/var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7136355081/log.50010673._001377.job.log.tgz.1
[2026-05-11 18:49:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/ef/log.50010673._001377.job.log.tgz.1
[2026-05-11 18:49:24]  workdir=None
[2026-05-11 18:49:24] ]
[2026-05-11 18:49:24] 2026-05-11 16:48:14,055 | INFO     | transferring file log.50010673._001377.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7136355081/log.50010673._001377.job.log.tgz.1 to /var/lib/b
[2026-05-11 18:49:24] 2026-05-11 16:48:14,055 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7136355081/log.50010673._001377.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/0/lo
[2026-05-11 18:49:24] 2026-05-11 16:48:14,068 | INFO     | adding to output.list: log.50010673._001377.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/ef/log.50010673._001377.job.log.tg
[2026-05-11 18:49:24] 2026-05-11 16:48:14,069 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-11 18:49:24] 2026-05-11 16:48:14,069 | INFO     | summary of transferred files:
[2026-05-11 18:49:24] 2026-05-11 16:48:14,069 | INFO     |  -- lfn=log.50010673._001377.job.log.tgz.1, status_code=0, status=transferred
[2026-05-11 18:49:24] 2026-05-11 16:48:14,069 | INFO     | stage-out finished correctly
[2026-05-11 18:49:24] 2026-05-11 16:48:14,356 | WARNING  | process 3035386 can no longer be monitored (due to stat problems) - aborting
[2026-05-11 18:49:24] 2026-05-11 16:48:14,356 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7136355081/memory_monitor_summary.json (trf name=prmon)
[2026-05-11 18:49:24] 2026-05-11 16:48:14,357 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7136355081/memory_monitor_summary.json (trf name=prmon)
[2026-05-11 18:49:24] 2026-05-11 16:48:14,357 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-11 18:49:24] 2026-05-11 16:48:14,357 | WARNING  | maxPSS not found in memory monitor output
[2026-05-11 18:49:24] 2026-05-11 16:48:14,358 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2315995 B
[2026-05-11 18:49:24] 2026-05-11 16:48:14,358 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15851 B
[2026-05-11 18:49:24] 2026-05-11 16:48:14,358 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-05-11 18:49:24] 2026-05-11 16:48:14,368 | INFO     | sufficient remaining disk space (62463672320 B)
[2026-05-11 18:49:24] 2026-05-11 16:48:14,369 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-05-11 18:49:24] 2026-05-11 16:48:14,370 | INFO     | size of work directory /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7136355081: 2619974 B (within 5033164800 B limit)
[2026-05-11 18:49:24] 2026-05-11 16:48:14,370 | INFO     | pfn file=/var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7136355081/HITS.50010673._001377.pool.root.1 does not exist (skip from workdir size calculation)
[2026-05-11 18:49:24] 2026-05-11 16:48:14,370 | INFO     | total size of present files: 0 B (workdir size: 2619974 B)
[2026-05-11 18:49:24] 2026-05-11 16:48:14,370 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7136355081/HITS.50010673._001377.pool.root.1 since it does not exist
[2026-05-11 18:49:24] 2026-05-11 16:48:14,560 | INFO     | number of running child processes to parent process 3035386: 1
[2026-05-11 18:49:24] 2026-05-11 16:48:14,560 | INFO     | maximum number of monitored processes: 6
[2026-05-11 18:49:24] 2026-05-11 16:48:15,352 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-11 18:49:24] 2026-05-11 16:48:16,124 | INFO     | job 7136355081 has state=finished
[2026-05-11 18:49:24] 2026-05-11 16:48:16,124 | INFO     | preparing for final server update for job 7136355081 in state='finished'
[2026-05-11 18:49:24] 2026-05-11 16:48:16,125 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7136355081/jobReport.json
[2026-05-11 18:49:24] 2026-05-11 16:48:16,126 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/0/workernode_map.json
[2026-05-11 18:49:24] 2026-05-11 16:48:16,126 | INFO     | this job has now completed (state=finished)
[2026-05-11 18:49:24] 2026-05-11 16:48:16,126 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-11 18:49:24] 2026-05-11 16:48:16,126 | INFO     | log transfer has been attempted: DONE
[2026-05-11 18:49:24] 2026-05-11 16:48:16,127 | INFO     | job 7136355081 has finished - writing final server update
[2026-05-11 18:49:24] 2026-05-11 16:48:16,127 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_251839/.job.ad'
[2026-05-11 18:49:24] 2026-05-11 16:48:16,127 | INFO     | total number of processed events: 400 (read)
[2026-05-11 18:49:24] 2026-05-11 16:48:16,134 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7136355081/memory_monitor_summary.json (trf name=prmon)
[2026-05-11 18:49:24] 2026-05-11 16:48:16,134 | INFO     | extracted standard info from prmon json
[2026-05-11 18:49:24] 2026-05-11 16:48:16,134 | INFO     | extracted standard memory fields from prmon json
[2026-05-11 18:49:24] 2026-05-11 16:48:16,134 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-11 18:49:24] 2026-05-11 16:48:16,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-11 18:49:24] 2026-05-11 16:48:16,135 | INFO     | fitting pss+swap vs Time
[2026-05-11 18:49:24] 2026-05-11 16:48:16,136 | INFO     | sum of square deviations: 197203697.5
[2026-05-11 18:49:24] 2026-05-11 16:48:16,136 | INFO     | sum of deviations: -1661140623.5
[2026-05-11 18:49:24] 2026-05-11 16:48:16,136 | INFO     | mean x (centered): 0.0
[2026-05-11 18:49:24] 2026-05-11 16:48:16,136 | INFO     | mean y: 2433469.3139534886
[2026-05-11 18:49:24] 2026-05-11 16:48:16,136 | INFO     | intersect: 2433469.3139534886
[2026-05-11 18:49:24] 2026-05-11 16:48:16,136 | INFO     | chi2: 0.017572921108255507
[2026-05-11 18:49:24] 2026-05-11 16:48:16,136 | INFO     | current memory leak: -8.42 B/s (using 86 data points, chi2=0.02)
[2026-05-11 18:49:24] 2026-05-11 16:48:16,136 | INFO     | could have reported an average CPU frequency of 3063 MHz (7 samples)
[2026-05-11 18:49:24] 2026-05-11 16:48:16,137 | INFO     | ..............................
[2026-05-11 18:49:24] 2026-05-11 16:48:16,137 | INFO     | . Timing measurements:
[2026-05-11 18:49:24] 2026-05-11 16:48:16,137 | INFO     | . get job = 0 s
[2026-05-11 18:49:24] 2026-05-11 16:48:16,137 | INFO     | . initial setup = 4 s
[2026-05-11 18:49:24] 2026-05-11 16:48:16,137 | INFO     | . payload setup = 6 s
[2026-05-11 18:49:24] 2026-05-11 16:48:16,137 | INFO     | . stage-in = 0 s
[2026-05-11 18:49:24] 2026-05-11 16:48:16,137 | INFO     | . payload execution = 5625 s
[2026-05-11 18:49:24] 2026-05-11 16:48:16,137 | INFO     | . stage-out = 0 s
[2026-05-11 18:49:24] 2026-05-11 16:48:16,137 | INFO     | . log creation = 0 s
[2026-05-11 18:49:24] 2026-05-11 16:48:16,137 | INFO     | ..............................
[2026-05-11 18:49:24] 2026-05-11 16:48:16,185 | INFO     | 
[2026-05-11 18:49:24] 2026-05-11 16:48:16,185 | INFO     | job summary report
[2026-05-11 18:49:24] 2026-05-11 16:48:16,185 | INFO     | --------------------------------------------------
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | PanDA job id: 7136355081
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | task id: 50010673
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | errors: (none)
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | pilot state: finished 
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | transexitcode: 0
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | exeerrorcode: 0
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | exeerrordiag: 
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | exitcode: 0
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | exitmsg: OK
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | cpuconsumptiontime: 21671 s
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | nevents: 400
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | neventsw: 0
[2026-05-11 18:49:24] 2026-05-11 16:48:16,186 | INFO     | pid: 3035386
[2026-05-11 18:49:24] 2026-05-11 16:48:16,187 | INFO     | pgrp: 3035386
[2026-05-11 18:49:24] 2026-05-11 16:48:16,187 | INFO     | corecount: 4
[2026-05-11 18:49:24] 2026-05-11 16:48:16,187 | INFO     | event service: False
[2026-05-11 18:49:24] 2026-05-11 16:48:16,187 | INFO     | sizes: {0: 2267414, 11: 2267414, 5635: 2294150, 5636: 2303170, 5637: 2303254, 5638: 2303448}
[2026-05-11 18:49:24] 2026-05-11 16:48:16,187 | INFO     | --------------------------------------------------
[2026-05-11 18:49:24] 2026-05-11 16:48:16,187 | INFO     | 
[2026-05-11 18:49:24] 2026-05-11 16:48:16,187 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/0
[2026-05-11 18:49:24] 2026-05-11 16:48:16,201 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,201 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,201 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,203 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,203 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-11 18:49:24] 2026-05-11 16:48:16,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,203 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-11 18:49:24] 2026-05-11 16:48:16,203 | INFO     | job 7136355081 has completed (purged errors)
[2026-05-11 18:49:24] 2026-05-11 16:48:16,203 | INFO     | overall cleanup function is called
[2026-05-11 18:49:24] 2026-05-11 16:48:17,210 | INFO     | --- collectZombieJob: --- 10, [3035386]
[2026-05-11 18:49:24] 2026-05-11 16:48:17,210 | INFO     | zombie collector waiting for pid 3035386
[2026-05-11 18:49:24] 2026-05-11 16:48:17,210 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-11 18:49:24] 2026-05-11 16:48:17,210 | INFO     | collected zombie processes
[2026-05-11 18:49:24] 2026-05-11 16:48:17,211 | INFO     | will attempt to kill all subprocesses of pid=3035386
[2026-05-11 18:49:24] 2026-05-11 16:48:17,408 | INFO     | process IDs to be killed: [3035386] (in reverse order)
[2026-05-11 18:49:24] 2026-05-11 16:48:17,477 | WARNING  | found no corresponding commands to process id(s)
[2026-05-11 18:49:24] 2026-05-11 16:48:17,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-11 18:49:24] 2026-05-11 16:48:17,484 | INFO     | did not find any defunct processes belonging to 3035386
[2026-05-11 18:49:24] 2026-05-11 16:48:17,491 | INFO     | did not find any defunct processes belonging to 3035386
[2026-05-11 18:49:24] 2026-05-11 16:48:17,491 | INFO     | Ready for new job
[2026-05-11 18:49:24] 2026-05-11 16:48:17,492 | INFO     | ***************************************
[2026-05-11 18:49:24] 2026-05-11 16:48:17,492 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-11 18:49:24] 2026-05-11 16:48:17,492 | INFO     | ***************************************
[2026-05-11 18:49:24] 2026-05-11 16:48:17,492 | INFO     | 
[2026-05-11 18:49:24] 2026-05-11 16:48:17,494 | INFO     | architecture information:
[2026-05-11 18:49:24] 2026-05-11 16:48:17,495 | INFO     | executing command: cat /etc/os-release
[2026-05-11 18:49:24] 2026-05-11 16:48:17,505 | INFO     | cat /etc/os-release:
[2026-05-11 18:49:24] NAME="CentOS Linux"
[2026-05-11 18:49:24] VERSION="7 (Core)"
[2026-05-11 18:49:24] ID="centos"
[2026-05-11 18:49:24] ID_LIKE="rhel fedora"
[2026-05-11 18:49:24] VERSION_ID="7"
[2026-05-11 18:49:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-11 18:49:24] ANSI_COLOR="0;31"
[2026-05-11 18:49:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-11 18:49:24] HOME_URL="https://www.centos.org/"
[2026-05-11 18:49:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-11 18:49:24] 
[2026-05-11 18:49:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-11 18:49:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-11 18:49:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-11 18:49:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-11 18:49:24] 
[2026-05-11 18:49:24] 2026-05-11 16:48:17,505 | INFO     | ***************************************
[2026-05-11 18:49:24] 2026-05-11 16:48:18,008 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-05-11 18:49:24] 2026-05-11 16:48:18,019 | INFO     | sufficient remaining disk space (62466818048 B)
[2026-05-11 18:49:24] 2026-05-11 16:48:18,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-11 18:49:24] 2026-05-11 16:48:18,019 | INFO     | current server update state: UPDATING_FINAL
[2026-05-11 18:49:24] 2026-05-11 16:48:18,020 | INFO     | update_server=False
[2026-05-11 18:49:24] 2026-05-11 16:48:18,020 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-11 18:49:24] 2026-05-11 16:48:18,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-11 18:49:24] 2026-05-11 16:48:18,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-11 18:49:24] 2026-05-11 16:48:18,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-11 18:49:24] 2026-05-11 16:48:18,069 | INFO     | aborting loop
[2026-05-11 18:49:24] 2026-05-11 16:48:18,333 | INFO     | all data control threads have been joined
[2026-05-11 18:49:24] 2026-05-11 16:48:18,433 | INFO     | all payload control threads have been joined
[2026-05-11 18:49:24] 2026-05-11 16:48:18,833 | INFO     | job.realtimelogging is not enabled
[2026-05-11 18:49:24] 2026-05-11 16:48:18,939 | INFO     | all job control threads have been joined
[2026-05-11 18:49:24] 2026-05-11 16:48:19,025 | INFO     | [job] retrieve thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:19,025 | INFO     | [job] queue monitor thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:19,074 | INFO     | [job] job monitor thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:19,339 | INFO     | [data] control thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:19,438 | INFO     | [payload] control thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:19,466 | INFO     | [payload] failed_post thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:19,839 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:19,861 | INFO     | [payload] execute_payloads thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:19,877 | INFO     | [job] validate thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:19,945 | INFO     | [job] control thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:20,026 | INFO     | [data] copytool_out thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:20,218 | INFO     | [job] create_data_payload thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:20,232 | INFO     | [payload] validate_pre thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:20,346 | INFO     | [payload] validate_post thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:20,520 | INFO     | [data] copytool_in thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:21,446 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-11 18:49:24] 2026-05-11 16:48:25,452 | INFO     | [data] queue_monitor thread has finished
[2026-05-11 18:49:24] 2026-05-11 16:48:49,224 | INFO     | PID=3030441 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-11 18:49:24] 2026-05-11 16:48:49,224 | INFO     | .. there are 4 such processes running
[2026-05-11 18:49:24] 2026-05-11 16:48:49,225 | INFO     | found 0 job(s) in 20 queues
[2026-05-11 18:49:24] 2026-05-11 16:48:49,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-11 18:49:24] 2026-05-11 16:48:49,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-11 18:49:24] 2026-05-11 16:49:13,063 | INFO     | [monitor] cgroup control has ended
[2026-05-11 18:49:24] 2026-05-11 16:49:13,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23061622568768)>', '<ExcThread(monitor, started 23061381519104)>']
[2026-05-11 18:49:24] 2026-05-11 16:49:14,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-11 18:49:24] 2026-05-11 16:49:14,343 | INFO     | [monitor] control thread has ended
[2026-05-11 18:49:24] 2026-05-11 16:49:18,518 | INFO     | all workflow threads have been joined
[2026-05-11 18:49:24] 2026-05-11 16:49:18,518 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-11 18:49:24] 2026-05-11 16:49:18,519 | INFO     | traces error code: 0
[2026-05-11 18:49:24] 2026-05-11 16:49:18,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-11 18:49:24] 2026-05-11 16:49:18,638 [wrapper] ==== pilot stdout END ====
[2026-05-11 18:49:24] 2026-05-11 16:49:18,640 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-11 18:49:24] 2026-05-11 16:49:18,641 [wrapper] pilotpid: 3030441
[2026-05-11 18:49:24] 2026-05-11 16:49:18,643 [wrapper] Pilot exit status: 0
[2026-05-11 18:49:24] 2026-05-11 16:49:18,650 [wrapper] pandaids: 7136355081
[2026-05-11 18:49:24] 2026-05-11 16:49:18,700 [wrapper] cleanup supervisor_pilot 3126207 3030442
[2026-05-11 18:49:24] 2026-05-11 16:49:18,702 [wrapper] Test setup, not cleaning
[2026-05-11 18:49:24] 2026-05-11 16:49:18,704 [wrapper] apfmon messages muted
[2026-05-11 18:49:24] 2026-05-11 16:49:18,706 [wrapper] ==== wrapper stdout END ====
[2026-05-11 18:49:24] 2026-05-11 16:49:18,707 [wrapper] ==== wrapper stderr END ====
[2026-05-11 18:49:24]  *** Error codes and diagnostics ***
[2026-05-11 18:49:24]     "exeErrorCode": 0,
[2026-05-11 18:49:24]     "pilotErrorCode": 0,
[2026-05-11 18:49:24]  *** Listing of results directory ***
[2026-05-11 18:49:24] total 408256
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc    683926 May 11 10:12 pilot3.tar.gz
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc      5631 May 11 10:32 queuedata.json
[2026-05-11 18:49:24] -rwx------. 1 boinc boinc     36281 May 11 10:33 runpilot2-wrapper.sh
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc       100 May 11 17:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-11 18:49:24] -rwxr-xr-x. 1 boinc boinc      7986 May 11 17:13 run_atlas
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc       105 May 11 17:13 job.xml
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc      6481 May 11 17:13 init_data.xml
[2026-05-11 18:49:24] -rw-r--r--. 2 boinc boinc 246273258 May 11 17:13 EVNT.50010670._000072.pool.root.1
[2026-05-11 18:49:24] -rw-r--r--. 2 boinc boinc     15667 May 11 17:13 start_atlas.sh
[2026-05-11 18:49:24] drwxrwx--x. 2 boinc boinc      4096 May 11 17:13 shared
[2026-05-11 18:49:24] -rw-r--r--. 2 boinc boinc    697403 May 11 17:13 input.tar.gz
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc         0 May 11 17:13 boinc_lockfile
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc      2507 May 11 17:13 pandaJob.out
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc    995511 May 11 17:14 agis_schedconf.cvmfs.json
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc   1502367 May 11 17:14 agis_ddmendpoints.agis.ALL.json
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc       452 May 11 17:14 workernode_map.json
[2026-05-11 18:49:24] drwx------. 5 boinc boinc      4096 May 11 17:14 pilot3
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc       487 May 11 18:47 boinc_task_state.xml
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc 166030554 May 11 18:47 HITS.50010673._001377.pool.root.1
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc      1043 May 11 18:48 memory_monitor_summary.json
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc    249763 May 11 18:48 log.50010673._001377.job.log.tgz.1
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc      6414 May 11 18:48 heartbeat_new.json
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc      6305 May 11 18:48 heartbeat.json
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc        95 May 11 18:48 pilot_heartbeat.json
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc      8192 May 11 18:49 boinc_mmap_file
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc        27 May 11 18:49 wrapper_checkpoint.txt
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc      4903 May 11 18:49 pilotlog.txt
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc    564965 May 11 18:49 log.50010673._001377.job.log.1
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc       357 May 11 18:49 output.list
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc       410 May 11 18:49 runtime_log
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc    829440 May 11 18:49 result.tar.gz
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc      8827 May 11 18:49 runtime_log.err
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc       661 May 11 18:49 943bd66feaa9.diag
[2026-05-11 18:49:24] -rw-r--r--. 1 boinc boinc     22178 May 11 18:49 stderr.txt
[2026-05-11 18:49:24] HITS file was successfully produced:
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc 166030554 May 11 18:47 shared/HITS.pool.root.1
[2026-05-11 18:49:24]  *** Contents of shared directory: ***
[2026-05-11 18:49:24] total 404164
[2026-05-11 18:49:24] -rw-r--r--. 2 boinc boinc 246273258 May 11 17:13 ATLAS.root_0
[2026-05-11 18:49:24] -rw-r--r--. 2 boinc boinc     15667 May 11 17:13 start_atlas.sh
[2026-05-11 18:49:24] -rw-r--r--. 2 boinc boinc    697403 May 11 17:13 input.tar.gz
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc 166030554 May 11 18:47 HITS.pool.root.1
[2026-05-11 18:49:24] -rw-------. 1 boinc boinc    829440 May 11 18:49 result.tar.gz
18:49:26 (3026267): run_atlas exited; CPU time 21791.114819
18:49:26 (3026267): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN