Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:58:24 (3248470): wrapper (7.7.26015): starting
05:58:24 (3248470): wrapper: running run_atlas (--nthreads 4)
[2026-05-13 05:58:24] Arguments: --nthreads 4
[2026-05-13 05:58:24] Threads: 4
[2026-05-13 05:58:24] Checking for CVMFS
[2026-05-13 05:58:24] No cvmfs_config command found, will try listing directly
[2026-05-13 05:58:24] CVMFS is ok
[2026-05-13 05:58:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-13 05:58:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-13 05:58:24] Further information can be found at the LHC@home message board.
[2026-05-13 05:58:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-13 05:58:24] Checking for apptainer binary...
[2026-05-13 05:58:24] which: no apptainer in ((null))
[2026-05-13 05:58:24] apptainer is not installed, using version from CVMFS
[2026-05-13 05:58:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-13 05:58:25] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-13 05:58:25] apptainer works
[2026-05-13 05:58:25] Set ATHENA_PROC_NUMBER=4
[2026-05-13 05:58:25] Set ATHENA_CORE_NUMBER=4
[2026-05-13 05:58:25] Starting ATLAS job with PandaID=7136355023
[2026-05-13 05:58:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-13 07:50:02]  *** The last 200 lines of the pilot log: ***
[2026-05-13 07:50:02] 2026-05-13 05:49:19,478 | INFO     | using path: /var/lib/boinc/var/slot56/slots/3/PanDA_Pilot-7136355023/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 07:50:02] 2026-05-13 05:49:19,479 | INFO     | extracted standard info from prmon json
[2026-05-13 07:50:02] 2026-05-13 05:49:19,479 | INFO     | extracted standard memory fields from prmon json
[2026-05-13 07:50:02] 2026-05-13 05:49:19,479 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-13 07:50:02] 2026-05-13 05:49:19,479 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-13 07:50:02] 2026-05-13 05:49:19,482 | INFO     | fitting pss+swap vs Time
[2026-05-13 07:50:02] 2026-05-13 05:49:19,482 | INFO     | sum of square deviations: 401533110.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,483 | INFO     | sum of deviations: 3964070238.000001
[2026-05-13 07:50:02] 2026-05-13 05:49:19,483 | INFO     | mean x (centered): 0.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,483 | INFO     | mean y: 2290167.7247706424
[2026-05-13 07:50:02] 2026-05-13 05:49:19,483 | INFO     | intersect: 2290167.7247706424
[2026-05-13 07:50:02] 2026-05-13 05:49:19,483 | INFO     | chi2: 2.116892554052302
[2026-05-13 07:50:02] 2026-05-13 05:49:19,484 | INFO     | sum of square deviations: 348769330.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,484 | INFO     | sum of deviations: 10367217881.5
[2026-05-13 07:50:02] 2026-05-13 05:49:19,484 | INFO     | mean x (centered): 0.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,484 | INFO     | mean y: 2307947.721153846
[2026-05-13 07:50:02] 2026-05-13 05:49:19,484 | INFO     | intersect: 2307947.721153846
[2026-05-13 07:50:02] 2026-05-13 05:49:19,485 | INFO     | chi2: 1.327814684672694
[2026-05-13 07:50:02] 2026-05-13 05:49:19,485 | INFO     | current chi2=1.327814684672694 (change=37.2752914581848 %)
[2026-05-13 07:50:02] 2026-05-13 05:49:19,485 | INFO     | sum of square deviations: 300842850.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,485 | INFO     | sum of deviations: 9860697458.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,486 | INFO     | mean x (centered): 0.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,486 | INFO     | mean y: 2306334.4646464647
[2026-05-13 07:50:02] 2026-05-13 05:49:19,486 | INFO     | intersect: 2306334.4646464647
[2026-05-13 07:50:02] 2026-05-13 05:49:19,486 | INFO     | chi2: 1.330609649512616
[2026-05-13 07:50:02] 2026-05-13 05:49:19,486 | INFO     | current chi2=1.330609649512616 (change=-0.21049359313352534 %)
[2026-05-13 07:50:02] 2026-05-13 05:49:19,486 | INFO     | right removable region: 98
[2026-05-13 07:50:02] 2026-05-13 05:49:19,486 | INFO     | sum of square deviations: 348769330.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,487 | INFO     | sum of deviations: -8948281906.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,487 | INFO     | mean x (centered): 0.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,487 | INFO     | mean y: 2326549.423076923
[2026-05-13 07:50:02] 2026-05-13 05:49:19,487 | INFO     | intersect: 2326549.423076923
[2026-05-13 07:50:02] 2026-05-13 05:49:19,487 | INFO     | chi2: 0.837519842614396
[2026-05-13 07:50:02] 2026-05-13 05:49:19,487 | INFO     | current chi2=0.837519842614396 (change=60.436355590596335 %)
[2026-05-13 07:50:02] 2026-05-13 05:49:19,488 | INFO     | sum of square deviations: 300842850.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,488 | INFO     | sum of deviations: -7926308097.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,488 | INFO     | mean x (centered): 0.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,488 | INFO     | mean y: 2323275.1919191917
[2026-05-13 07:50:02] 2026-05-13 05:49:19,488 | INFO     | intersect: 2323275.1919191917
[2026-05-13 07:50:02] 2026-05-13 05:49:19,489 | INFO     | chi2: 0.8380693398792797
[2026-05-13 07:50:02] 2026-05-13 05:49:19,489 | INFO     | current chi2=0.8380693398792797 (change=-0.06561005923970925 %)
[2026-05-13 07:50:02] 2026-05-13 05:49:19,489 | INFO     | left removable region: 10
[2026-05-13 07:50:02] 2026-05-13 05:49:19,489 | INFO     | sum of square deviations: 211285822.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,489 | INFO     | sum of deviations: -1504861734.5000002
[2026-05-13 07:50:02] 2026-05-13 05:49:19,490 | INFO     | mean x (centered): 0.0
[2026-05-13 07:50:02] 2026-05-13 05:49:19,490 | INFO     | mean y: 2345034.0113636362
[2026-05-13 07:50:02] 2026-05-13 05:49:19,490 | INFO     | intersect: 2345034.0113636362
[2026-05-13 07:50:02] 2026-05-13 05:49:19,490 | INFO     | chi2: 0.01060543528239477
[2026-05-13 07:50:02] 2026-05-13 05:49:19,490 | INFO     | current memory leak: -7.12 B/s (using 88 data points, chi2=0.01)
[2026-05-13 07:50:02] 2026-05-13 05:49:19,490 | INFO     | could have reported an average CPU frequency of 2757 MHz (7 samples)
[2026-05-13 07:50:02] 2026-05-13 05:49:19,491 | INFO     | ..............................
[2026-05-13 07:50:02] 2026-05-13 05:49:19,491 | INFO     | . Timing measurements:
[2026-05-13 07:50:02] 2026-05-13 05:49:19,491 | INFO     | . get job = 0 s
[2026-05-13 07:50:02] 2026-05-13 05:49:19,491 | INFO     | . initial setup = 7 s
[2026-05-13 07:50:02] 2026-05-13 05:49:19,491 | INFO     | . payload setup = 14 s
[2026-05-13 07:50:02] 2026-05-13 05:49:19,491 | INFO     | . stage-in = 0 s
[2026-05-13 07:50:02] 2026-05-13 05:49:19,491 | INFO     | . payload execution = 6601 s
[2026-05-13 07:50:02] 2026-05-13 05:49:19,491 | INFO     | . stage-out = 0 s
[2026-05-13 07:50:02] 2026-05-13 05:49:19,491 | INFO     | . log creation = 0 s
[2026-05-13 07:50:02] 2026-05-13 05:49:19,491 | INFO     | ..............................
[2026-05-13 07:50:02] 2026-05-13 05:49:20,009 | INFO     | 
[2026-05-13 07:50:02] 2026-05-13 05:49:20,009 | INFO     | job summary report
[2026-05-13 07:50:02] 2026-05-13 05:49:20,009 | INFO     | --------------------------------------------------
[2026-05-13 07:50:02] 2026-05-13 05:49:20,009 | INFO     | PanDA job id: 7136355023
[2026-05-13 07:50:02] 2026-05-13 05:49:20,009 | INFO     | task id: 50010673
[2026-05-13 07:50:02] 2026-05-13 05:49:20,009 | INFO     | errors: (none)
[2026-05-13 07:50:02] 2026-05-13 05:49:20,009 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | pilot state: finished 
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | transexitcode: 0
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | exeerrorcode: 0
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | exeerrordiag: 
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | exitcode: 0
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | exitmsg: OK
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | cpuconsumptiontime: 25043 s
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | nevents: 400
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | neventsw: 0
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | pid: 3263039
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | pgrp: 3263039
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | corecount: 4
[2026-05-13 07:50:02] 2026-05-13 05:49:20,010 | INFO     | event service: False
[2026-05-13 07:50:02] 2026-05-13 05:49:20,011 | INFO     | sizes: {0: 2265611, 1: 2267440, 11: 2267440, 6620: 2294525, 6621: 2303600, 6622: 2303738}
[2026-05-13 07:50:02] 2026-05-13 05:49:20,011 | INFO     | --------------------------------------------------
[2026-05-13 07:50:02] 2026-05-13 05:49:20,011 | INFO     | 
[2026-05-13 07:50:02] 2026-05-13 05:49:20,011 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/3
[2026-05-13 07:50:02] 2026-05-13 05:49:20,039 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,040 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,040 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,040 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,040 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,040 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,040 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,041 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-13 07:50:02] 2026-05-13 05:49:20,042 | INFO     | job 7136355023 has completed (purged errors)
[2026-05-13 07:50:02] 2026-05-13 05:49:20,042 | INFO     | overall cleanup function is called
[2026-05-13 07:50:02] 2026-05-13 05:49:21,050 | INFO     | --- collectZombieJob: --- 10, [3263039]
[2026-05-13 07:50:02] 2026-05-13 05:49:21,051 | INFO     | zombie collector waiting for pid 3263039
[2026-05-13 07:50:02] 2026-05-13 05:49:21,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-13 07:50:02] 2026-05-13 05:49:21,051 | INFO     | collected zombie processes
[2026-05-13 07:50:02] 2026-05-13 05:49:21,051 | INFO     | will attempt to kill all subprocesses of pid=3263039
[2026-05-13 07:50:02] 2026-05-13 05:49:21,548 | INFO     | process IDs to be killed: [3263039] (in reverse order)
[2026-05-13 07:50:02] 2026-05-13 05:49:21,803 | WARNING  | found no corresponding commands to process id(s)
[2026-05-13 07:50:02] 2026-05-13 05:49:21,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-13 07:50:02] 2026-05-13 05:49:21,829 | INFO     | did not find any defunct processes belonging to 3263039
[2026-05-13 07:50:02] 2026-05-13 05:49:21,850 | INFO     | did not find any defunct processes belonging to 3263039
[2026-05-13 07:50:02] 2026-05-13 05:49:21,850 | INFO     | Ready for new job
[2026-05-13 07:50:02] 2026-05-13 05:49:21,852 | INFO     | ***************************************
[2026-05-13 07:50:02] 2026-05-13 05:49:21,852 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-13 07:50:02] 2026-05-13 05:49:21,852 | INFO     | ***************************************
[2026-05-13 07:50:02] 2026-05-13 05:49:21,853 | INFO     | 
[2026-05-13 07:50:02] 2026-05-13 05:49:21,861 | INFO     | architecture information:
[2026-05-13 07:50:02] 2026-05-13 05:49:21,861 | INFO     | executing command: cat /etc/os-release
[2026-05-13 07:50:02] 2026-05-13 05:49:21,883 | INFO     | cat /etc/os-release:
[2026-05-13 07:50:02] NAME="CentOS Linux"
[2026-05-13 07:50:02] VERSION="7 (Core)"
[2026-05-13 07:50:02] ID="centos"
[2026-05-13 07:50:02] ID_LIKE="rhel fedora"
[2026-05-13 07:50:02] VERSION_ID="7"
[2026-05-13 07:50:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-13 07:50:02] ANSI_COLOR="0;31"
[2026-05-13 07:50:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-13 07:50:02] HOME_URL="https://www.centos.org/"
[2026-05-13 07:50:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-13 07:50:02] 
[2026-05-13 07:50:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-13 07:50:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-13 07:50:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-13 07:50:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-13 07:50:02] 
[2026-05-13 07:50:02] 2026-05-13 05:49:21,883 | INFO     | ***************************************
[2026-05-13 07:50:02] 2026-05-13 05:49:22,387 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/3
[2026-05-13 07:50:02] 2026-05-13 05:49:22,403 | INFO     | sufficient remaining disk space (312830066688 B)
[2026-05-13 07:50:02] 2026-05-13 05:49:22,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-13 07:50:02] 2026-05-13 05:49:22,404 | INFO     | current server update state: UPDATING_FINAL
[2026-05-13 07:50:02] 2026-05-13 05:49:22,404 | INFO     | update_server=False
[2026-05-13 07:50:02] 2026-05-13 05:49:22,404 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-13 07:50:02] 2026-05-13 05:49:22,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-13 07:50:02] 2026-05-13 05:49:22,628 | INFO     | all payload control threads have been joined
[2026-05-13 07:50:02] 2026-05-13 05:49:22,957 | INFO     | job.realtimelogging is not enabled
[2026-05-13 07:50:02] 2026-05-13 05:49:23,134 | INFO     | all job control threads have been joined
[2026-05-13 07:50:02] 2026-05-13 05:49:23,271 | INFO     | all data control threads have been joined
[2026-05-13 07:50:02] 2026-05-13 05:49:23,324 | WARNING  | process 3263039 can no longer be monitored (due to stat problems) - aborting
[2026-05-13 07:50:02] 2026-05-13 05:49:23,410 | INFO     | [job] retrieve thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:23,634 | INFO     | [payload] control thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:23,781 | INFO     | [payload] failed_post thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:23,821 | INFO     | [payload] execute_payloads thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:23,838 | INFO     | using path: /var/lib/boinc/var/slot56/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-05-13 07:50:02] 2026-05-13 05:49:23,963 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:24,137 | INFO     | [job] control thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:24,193 | INFO     | [job] validate thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:24,277 | INFO     | [data] control thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:24,310 | INFO     | [job] create_data_payload thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:24,360 | INFO     | [payload] validate_post thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:24,391 | INFO     | number of running child processes to parent process 3263039: 1
[2026-05-13 07:50:02] 2026-05-13 05:49:24,392 | INFO     | maximum number of monitored processes: 6
[2026-05-13 07:50:02] 2026-05-13 05:49:24,392 | INFO     | aborting job monitoring since job object (job id=7136355023) has expired
[2026-05-13 07:50:02] 2026-05-13 05:49:24,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-13 07:50:02] 2026-05-13 05:49:24,392 | INFO     | will abort loop
[2026-05-13 07:50:02] 2026-05-13 05:49:24,409 | INFO     | [data] copytool_out thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:24,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-13 07:50:02] 2026-05-13 05:49:24,623 | INFO     | [payload] validate_pre thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:24,885 | INFO     | [data] copytool_in thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:25,397 | INFO     | [job] job monitor thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:25,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-13 07:50:02] 2026-05-13 05:49:25,599 | INFO     | [job] queue monitor thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:29,465 | INFO     | [data] queue_monitor thread has finished
[2026-05-13 07:50:02] 2026-05-13 05:49:51,809 | INFO     | PID=3252927 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-13 07:50:02] 2026-05-13 05:49:51,809 | INFO     | .. there are 12 such processes running
[2026-05-13 07:50:02] 2026-05-13 05:49:51,810 | INFO     | found 0 job(s) in 20 queues
[2026-05-13 07:50:02] 2026-05-13 05:49:51,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-13 07:50:02] 2026-05-13 05:49:51,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-13 07:50:02] 2026-05-13 05:49:56,632 | INFO     | [monitor] cgroup control has ended
[2026-05-13 07:50:02] 2026-05-13 05:49:57,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22469991122752)>', '<ExcThread(monitor, started 22469756073728)>']
[2026-05-13 07:50:02] 2026-05-13 05:49:57,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-13 07:50:02] 2026-05-13 05:49:57,830 | INFO     | [monitor] control thread has ended
[2026-05-13 07:50:02] 2026-05-13 05:50:02,546 | INFO     | all workflow threads have been joined
[2026-05-13 07:50:02] 2026-05-13 05:50:02,547 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-13 07:50:02] 2026-05-13 05:50:02,547 | INFO     | traces error code: 0
[2026-05-13 07:50:02] 2026-05-13 05:50:02,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-13 07:50:02] 2026-05-13 05:50:02,680 [wrapper] ==== pilot stdout END ====
[2026-05-13 07:50:02] 2026-05-13 05:50:02,683 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-13 07:50:02] 2026-05-13 05:50:02,686 [wrapper] pilotpid: 3252927
[2026-05-13 07:50:02] 2026-05-13 05:50:02,690 [wrapper] Pilot exit status: 0
[2026-05-13 07:50:02] 2026-05-13 05:50:02,703 [wrapper] pandaids: 7136355023
[2026-05-13 07:50:02] 2026-05-13 05:50:02,866 [wrapper] cleanup supervisor_pilot 3516631 3252928
[2026-05-13 07:50:02] 2026-05-13 05:50:02,870 [wrapper] Test setup, not cleaning
[2026-05-13 07:50:02] 2026-05-13 05:50:02,874 [wrapper] apfmon messages muted
[2026-05-13 07:50:02] 2026-05-13 05:50:02,877 [wrapper] ==== wrapper stdout END ====
[2026-05-13 07:50:02] 2026-05-13 05:50:02,880 [wrapper] ==== wrapper stderr END ====
[2026-05-13 07:50:02]  *** Error codes and diagnostics ***
[2026-05-13 07:50:02]     "exeErrorCode": 0,
[2026-05-13 07:50:02]     "pilotErrorCode": 0,
[2026-05-13 07:50:02]  *** Listing of results directory ***
[2026-05-13 07:50:02] total 404280
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc    683926 May 11 10:12 pilot3.tar.gz
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc      5631 May 11 10:32 queuedata.json
[2026-05-13 07:50:02] -rwx------. 1 boinc boinc     36281 May 11 10:32 runpilot2-wrapper.sh
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc       100 May 13 05:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-13 07:50:02] -rwxr-xr-x. 1 boinc boinc      7986 May 13 05:58 run_atlas
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc       105 May 13 05:58 job.xml
[2026-05-13 07:50:02] -rw-r--r--. 2 boinc boinc 243657640 May 13 05:58 EVNT.50010670._000062.pool.root.1
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc      6540 May 13 05:58 init_data.xml
[2026-05-13 07:50:02] -rw-r--r--. 2 boinc boinc     15667 May 13 05:58 start_atlas.sh
[2026-05-13 07:50:02] drwxrwx--x. 2 boinc boinc      4096 May 13 05:58 shared
[2026-05-13 07:50:02] -rw-r--r--. 2 boinc boinc    697403 May 13 05:58 input.tar.gz
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc         0 May 13 05:58 boinc_lockfile
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc      2506 May 13 05:58 pandaJob.out
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc    998146 May 13 05:58 agis_schedconf.cvmfs.json
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc   1502367 May 13 05:58 agis_ddmendpoints.agis.ALL.json
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc       443 May 13 05:58 workernode_map.json
[2026-05-13 07:50:02] drwx------. 5 boinc boinc      4096 May 13 05:58 pilot3
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc 164431110 May 13 07:48 HITS.50010673._001319.pool.root.1
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc       487 May 13 07:49 boinc_task_state.xml
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc      1036 May 13 07:49 memory_monitor_summary.json
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc    253108 May 13 07:49 log.50010673._001319.job.log.tgz.1
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc      6355 May 13 07:49 heartbeat_new.json
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc      6246 May 13 07:49 heartbeat.json
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc      8192 May 13 07:49 boinc_mmap_file
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc        27 May 13 07:49 wrapper_checkpoint.txt
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc        95 May 13 07:49 pilot_heartbeat.json
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc      5438 May 13 07:50 pilotlog.txt
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc    632300 May 13 07:50 log.50010673._001319.job.log.1
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc       357 May 13 07:50 output.list
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc       410 May 13 07:50 runtime_log
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc    901120 May 13 07:50 result.tar.gz
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc      8827 May 13 07:50 runtime_log.err
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc       662 May 13 07:50 942f20e11aa8.diag
[2026-05-13 07:50:02] -rw-r--r--. 1 boinc boinc     20796 May 13 07:50 stderr.txt
[2026-05-13 07:50:02] HITS file was successfully produced:
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc 164431110 May 13 07:48 shared/HITS.pool.root.1
[2026-05-13 07:50:02]  *** Contents of shared directory: ***
[2026-05-13 07:50:02] total 400116
[2026-05-13 07:50:02] -rw-r--r--. 2 boinc boinc 243657640 May 13 05:58 ATLAS.root_0
[2026-05-13 07:50:02] -rw-r--r--. 2 boinc boinc     15667 May 13 05:58 start_atlas.sh
[2026-05-13 07:50:02] -rw-r--r--. 2 boinc boinc    697403 May 13 05:58 input.tar.gz
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc 164431110 May 13 07:48 HITS.pool.root.1
[2026-05-13 07:50:02] -rw-------. 1 boinc boinc    901120 May 13 07:50 result.tar.gz
07:50:04 (3248470): run_atlas exited; CPU time 25391.275149
07:50:04 (3248470): called boinc_finish(0)

</stderr_txt>
]]>

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