Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:21:06 (12199): wrapper (7.7.26015): starting
18:21:06 (12199): wrapper: running run_atlas (--nthreads 8)
[2026-05-09 18:21:07] Arguments: --nthreads 8
[2026-05-09 18:21:07] Threads: 8
[2026-05-09 18:21:07] Checking for CVMFS
[2026-05-09 18:21:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-09 18:21:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-09 18:21:11] Running cvmfs_config stat atlas.cern.ch
[2026-05-09 18:21:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-09 18:21:12] 2.11.2.0 10636 34517 98660 159406 0 11 21582234 25165824 967 130560 0 17904200 99.925 8415224 8822 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-09 18:21:12] CVMFS is ok
[2026-05-09 18:21:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-09 18:21:12] Checking for apptainer binary...
[2026-05-09 18:21:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-09 18:21:12] Running /usr/bin/apptainer --version
[2026-05-09 18:21:12] apptainer version 1.3.2-1.el7
[2026-05-09 18:21:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-09 18:21:22] cg-vwn366.simple-grid.lan
[2026-05-09 18:21:22] apptainer works
[2026-05-09 18:21:23] Set ATHENA_PROC_NUMBER=8
[2026-05-09 18:21:23] Set ATHENA_CORE_NUMBER=8
[2026-05-09 18:21:23] Starting ATLAS job with PandaID=7134350449
[2026-05-09 18:21:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-09 22:16:26]  *** The last 200 lines of the pilot log: ***
[2026-05-09 22:16:26] 2026-05-09 20:15:20,424 | INFO     | this job has now completed (state=finished)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,424 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,424 | INFO     | log transfer has been attempted: DONE
[2026-05-09 22:16:26] 2026-05-09 20:15:20,424 | INFO     | job 7134350449 has finished - writing final server update
[2026-05-09 22:16:26] 2026-05-09 20:15:20,425 | INFO     | total number of processed events: 400 (read)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,427 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7134350449/memory_monitor_summary.json (trf name=prmon)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,428 | INFO     | extracted standard info from prmon json
[2026-05-09 22:16:26] 2026-05-09 20:15:20,428 | INFO     | extracted standard memory fields from prmon json
[2026-05-09 22:16:26] 2026-05-09 20:15:20,428 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-09 22:16:26] 2026-05-09 20:15:20,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-09 22:16:26] 2026-05-09 20:15:20,433 | INFO     | fitting pss+swap vs Time
[2026-05-09 22:16:26] 2026-05-09 20:15:20,434 | INFO     | sum of square deviations: 3256879670.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,435 | INFO     | sum of deviations: 104787557165.99998
[2026-05-09 22:16:26] 2026-05-09 20:15:20,436 | INFO     | mean x (centered): 0.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,436 | INFO     | mean y: 2407239.4337899545
[2026-05-09 22:16:26] 2026-05-09 20:15:20,436 | INFO     | intersect: 2407239.4337899545
[2026-05-09 22:16:26] 2026-05-09 20:15:20,436 | INFO     | chi2: 10.041015195499865
[2026-05-09 22:16:26] 2026-05-09 20:15:20,437 | INFO     | sum of square deviations: 3038856977.5
[2026-05-09 22:16:26] 2026-05-09 20:15:20,439 | INFO     | sum of deviations: 117467836426.50002
[2026-05-09 22:16:26] 2026-05-09 20:15:20,439 | INFO     | mean x (centered): 0.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,439 | INFO     | mean y: 2415912.668224299
[2026-05-09 22:16:26] 2026-05-09 20:15:20,439 | INFO     | intersect: 2415912.668224299
[2026-05-09 22:16:26] 2026-05-09 20:15:20,439 | INFO     | chi2: 9.311102263738752
[2026-05-09 22:16:26] 2026-05-09 20:15:20,439 | INFO     | current chi2=9.311102263738752 (change=7.269314083781511 %)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,440 | INFO     | right removable region: 213
[2026-05-09 22:16:26] 2026-05-09 20:15:20,440 | INFO     | sum of square deviations: 3038856977.5
[2026-05-09 22:16:26] 2026-05-09 20:15:20,442 | INFO     | sum of deviations: 25668365954.500023
[2026-05-09 22:16:26] 2026-05-09 20:15:20,442 | INFO     | mean x (centered): 0.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,442 | INFO     | mean y: 2462577.761682243
[2026-05-09 22:16:26] 2026-05-09 20:15:20,442 | INFO     | intersect: 2462577.761682243
[2026-05-09 22:16:26] 2026-05-09 20:15:20,442 | INFO     | chi2: 4.284488948438996
[2026-05-09 22:16:26] 2026-05-09 20:15:20,443 | INFO     | current chi2=4.284488948438996 (change=57.330121855017225 %)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,443 | INFO     | sum of square deviations: 2830787960.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,444 | INFO     | sum of deviations: -33581013071.000008
[2026-05-09 22:16:26] 2026-05-09 20:15:20,445 | INFO     | mean x (centered): 0.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,445 | INFO     | mean y: 2505940.5598086123
[2026-05-09 22:16:26] 2026-05-09 20:15:20,445 | INFO     | intersect: 2505940.5598086123
[2026-05-09 22:16:26] 2026-05-09 20:15:20,445 | INFO     | chi2: 1.3145958428700804
[2026-05-09 22:16:26] 2026-05-09 20:15:20,445 | INFO     | current chi2=1.3145958428700804 (change=69.3173244536192 %)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,446 | INFO     | sum of square deviations: 2632440055.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,448 | INFO     | sum of deviations: -45960364173.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,448 | INFO     | mean x (centered): 0.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,448 | INFO     | mean y: 2515335.9607843137
[2026-05-09 22:16:26] 2026-05-09 20:15:20,448 | INFO     | intersect: 2515335.9607843137
[2026-05-09 22:16:26] 2026-05-09 20:15:20,449 | INFO     | chi2: 1.0406109672315886
[2026-05-09 22:16:26] 2026-05-09 20:15:20,449 | INFO     | current chi2=1.0406109672315886 (change=20.841757345003963 %)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,449 | INFO     | left removable region: 15
[2026-05-09 22:16:26] 2026-05-09 20:15:20,449 | INFO     | sum of square deviations: 2406926989.5
[2026-05-09 22:16:26] 2026-05-09 20:15:20,451 | INFO     | sum of deviations: -30597089064.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,451 | INFO     | mean x (centered): 0.0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,451 | INFO     | mean y: 2527519.797979798
[2026-05-09 22:16:26] 2026-05-09 20:15:20,451 | INFO     | intersect: 2527519.797979798
[2026-05-09 22:16:26] 2026-05-09 20:15:20,452 | INFO     | chi2: 0.16742469719790884
[2026-05-09 22:16:26] 2026-05-09 20:15:20,452 | INFO     | current memory leak: -12.71 B/s (using 198 data points, chi2=0.17)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,453 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,453 | INFO     | ..............................
[2026-05-09 22:16:26] 2026-05-09 20:15:20,453 | INFO     | . Timing measurements:
[2026-05-09 22:16:26] 2026-05-09 20:15:20,453 | INFO     | . get job = 0 s
[2026-05-09 22:16:26] 2026-05-09 20:15:20,453 | INFO     | . initial setup = 123 s
[2026-05-09 22:16:26] 2026-05-09 20:15:20,453 | INFO     | . payload setup = 183 s
[2026-05-09 22:16:26] 2026-05-09 20:15:20,453 | INFO     | . stage-in = 0 s
[2026-05-09 22:16:26] 2026-05-09 20:15:20,454 | INFO     | . payload execution = 13440 s
[2026-05-09 22:16:26] 2026-05-09 20:15:20,454 | INFO     | . stage-out = 1 s
[2026-05-09 22:16:26] 2026-05-09 20:15:20,454 | INFO     | . log creation = 0 s
[2026-05-09 22:16:26] 2026-05-09 20:15:20,454 | INFO     | ..............................
[2026-05-09 22:16:26] 2026-05-09 20:15:20,569 | INFO     | 
[2026-05-09 22:16:26] 2026-05-09 20:15:20,569 | INFO     | job summary report
[2026-05-09 22:16:26] 2026-05-09 20:15:20,569 | INFO     | --------------------------------------------------
[2026-05-09 22:16:26] 2026-05-09 20:15:20,570 | INFO     | PanDA job id: 7134350449
[2026-05-09 22:16:26] 2026-05-09 20:15:20,570 | INFO     | task id: 50087071
[2026-05-09 22:16:26] 2026-05-09 20:15:20,570 | INFO     | errors: (none)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,570 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-09 22:16:26] 2026-05-09 20:15:20,570 | INFO     | pilot state: finished 
[2026-05-09 22:16:26] 2026-05-09 20:15:20,570 | INFO     | transexitcode: 0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,570 | INFO     | exeerrorcode: 0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,570 | INFO     | exeerrordiag: 
[2026-05-09 22:16:26] 2026-05-09 20:15:20,570 | INFO     | exitcode: 0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,570 | INFO     | exitmsg: OK
[2026-05-09 22:16:26] 2026-05-09 20:15:20,571 | INFO     | cpuconsumptiontime: 51717 s
[2026-05-09 22:16:26] 2026-05-09 20:15:20,571 | INFO     | nevents: 400
[2026-05-09 22:16:26] 2026-05-09 20:15:20,571 | INFO     | neventsw: 0
[2026-05-09 22:16:26] 2026-05-09 20:15:20,571 | INFO     | pid: 20709
[2026-05-09 22:16:26] 2026-05-09 20:15:20,571 | INFO     | pgrp: 20709
[2026-05-09 22:16:26] 2026-05-09 20:15:20,571 | INFO     | corecount: 8
[2026-05-09 22:16:26] 2026-05-09 20:15:20,571 | INFO     | event service: False
[2026-05-09 22:16:26] 2026-05-09 20:15:20,571 | INFO     | sizes: {0: 2265462, 1: 2266374, 2: 2267976, 12: 2267976, 13627: 2298239, 13629: 2307421, 13632: 2307559}
[2026-05-09 22:16:26] 2026-05-09 20:15:20,571 | INFO     | --------------------------------------------------
[2026-05-09 22:16:26] 2026-05-09 20:15:20,571 | INFO     | 
[2026-05-09 22:16:26] 2026-05-09 20:15:20,572 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-09 22:16:26] 2026-05-09 20:15:20,617 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,617 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,617 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,617 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,619 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,620 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-09 22:16:26] 2026-05-09 20:15:20,620 | INFO     | job 7134350449 has completed (purged errors)
[2026-05-09 22:16:26] 2026-05-09 20:15:20,620 | INFO     | overall cleanup function is called
[2026-05-09 22:16:26] 2026-05-09 20:15:21,629 | INFO     | --- collectZombieJob: --- 10, [20709]
[2026-05-09 22:16:26] 2026-05-09 20:15:21,629 | INFO     | zombie collector waiting for pid 20709
[2026-05-09 22:16:26] 2026-05-09 20:15:21,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-09 22:16:26] 2026-05-09 20:15:21,629 | INFO     | collected zombie processes
[2026-05-09 22:16:26] 2026-05-09 20:15:21,629 | INFO     | will attempt to kill all subprocesses of pid=20709
[2026-05-09 22:16:26] 2026-05-09 20:15:21,688 | INFO     | process IDs to be killed: [20709] (in reverse order)
[2026-05-09 22:16:26] 2026-05-09 20:15:21,744 | WARNING  | found no corresponding commands to process id(s)
[2026-05-09 22:16:26] 2026-05-09 20:15:21,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-09 22:16:26] 2026-05-09 20:15:21,747 | INFO     | did not find any defunct processes belonging to 20709
[2026-05-09 22:16:26] 2026-05-09 20:15:21,748 | INFO     | did not find any defunct processes belonging to 20709
[2026-05-09 22:16:26] 2026-05-09 20:15:21,749 | INFO     | Ready for new job
[2026-05-09 22:16:26] 2026-05-09 20:15:21,751 | INFO     | ***************************************
[2026-05-09 22:16:26] 2026-05-09 20:15:21,751 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-09 22:16:26] 2026-05-09 20:15:21,751 | INFO     | ***************************************
[2026-05-09 22:16:26] 2026-05-09 20:15:21,751 | INFO     | 
[2026-05-09 22:16:26] 2026-05-09 20:15:21,752 | INFO     | pilot is running in a VM
[2026-05-09 22:16:26] 2026-05-09 20:15:21,752 | INFO     | architecture information:
[2026-05-09 22:16:26] 2026-05-09 20:15:21,752 | INFO     | executing command: cat /etc/os-release
[2026-05-09 22:16:26] 2026-05-09 20:15:21,770 | INFO     | cat /etc/os-release:
[2026-05-09 22:16:26] NAME="CentOS Linux"
[2026-05-09 22:16:26] VERSION="7 (Core)"
[2026-05-09 22:16:26] ID="centos"
[2026-05-09 22:16:26] ID_LIKE="rhel fedora"
[2026-05-09 22:16:26] VERSION_ID="7"
[2026-05-09 22:16:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-09 22:16:26] ANSI_COLOR="0;31"
[2026-05-09 22:16:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-09 22:16:26] HOME_URL="https://www.centos.org/"
[2026-05-09 22:16:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-09 22:16:26] 
[2026-05-09 22:16:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-09 22:16:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-09 22:16:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-09 22:16:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-09 22:16:26] 
[2026-05-09 22:16:26] 2026-05-09 20:15:21,771 | INFO     | ***************************************
[2026-05-09 22:16:26] 2026-05-09 20:15:22,274 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-09 22:16:26] 2026-05-09 20:15:22,297 | INFO     | sufficient remaining disk space (496854106112 B)
[2026-05-09 22:16:26] 2026-05-09 20:15:22,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-09 22:16:26] 2026-05-09 20:15:22,298 | INFO     | current server update state: UPDATING_FINAL
[2026-05-09 22:16:26] 2026-05-09 20:15:22,298 | INFO     | update_server=False
[2026-05-09 22:16:26] 2026-05-09 20:15:22,298 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-09 22:16:26] 2026-05-09 20:15:22,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-09 22:16:26] 2026-05-09 20:15:22,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-09 22:16:26] 2026-05-09 20:15:22,377 | INFO     | aborting loop
[2026-05-09 22:16:26] 2026-05-09 20:15:22,721 | INFO     | all data control threads have been joined
[2026-05-09 22:16:26] 2026-05-09 20:15:22,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-09 22:16:26] 2026-05-09 20:15:23,300 | INFO     | [job] retrieve thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:23,305 | INFO     | [job] queue monitor thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:23,336 | INFO     | [job] validate thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:23,341 | INFO     | [payload] validate_post thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:23,378 | INFO     | [job] job monitor thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:23,494 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:23,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-09 22:16:26] 2026-05-09 20:15:23,727 | INFO     | [data] control thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:23,739 | INFO     | all payload control threads have been joined
[2026-05-09 22:16:26] 2026-05-09 20:15:23,816 | INFO     | [job] create_data_payload thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:23,833 | INFO     | all job control threads have been joined
[2026-05-09 22:16:26] 2026-05-09 20:15:24,061 | INFO     | [payload] failed_post thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:24,089 | INFO     | [data] copytool_in thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:24,226 | INFO     | [payload] validate_pre thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:24,324 | INFO     | [payload] execute_payloads thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:24,745 | INFO     | [payload] control thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:24,839 | INFO     | [job] control thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:24,954 | INFO     | [data] copytool_out thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:27,574 | INFO     | [data] queue_monitor thread has finished
[2026-05-09 22:16:26] 2026-05-09 20:15:51,999 | INFO     | PID=16259 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-09 22:16:26] 2026-05-09 20:15:51,999 | INFO     | .. there are 2 such processes running
[2026-05-09 22:16:26] 2026-05-09 20:15:52,000 | INFO     | found 0 job(s) in 20 queues
[2026-05-09 22:16:26] 2026-05-09 20:15:52,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-09 22:16:26] 2026-05-09 20:15:52,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-09 22:16:26] 2026-05-09 20:16:19,326 | INFO     | [monitor] cgroup control has ended
[2026-05-09 22:16:26] 2026-05-09 20:16:20,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616366233408)>', '<ExcThread(monitor, started 140615929022208)>']
[2026-05-09 22:16:26] 2026-05-09 20:16:21,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-09 22:16:26] 2026-05-09 20:16:21,147 | INFO     | [monitor] control thread has ended
[2026-05-09 22:16:26] 2026-05-09 20:16:25,812 | INFO     | all workflow threads have been joined
[2026-05-09 22:16:26] 2026-05-09 20:16:25,812 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-09 22:16:26] 2026-05-09 20:16:25,813 | INFO     | traces error code: 0
[2026-05-09 22:16:26] 2026-05-09 20:16:25,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-09 22:16:26] 2026-05-09 20:16:25,927 [wrapper] ==== pilot stdout END ====
[2026-05-09 22:16:26] 2026-05-09 20:16:25,931 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-09 22:16:26] 2026-05-09 20:16:25,936 [wrapper] pilotpid: 16259
[2026-05-09 22:16:26] 2026-05-09 20:16:25,941 [wrapper] Pilot exit status: 0
[2026-05-09 22:16:26] 2026-05-09 20:16:25,956 [wrapper] pandaids: 7134350449
[2026-05-09 22:16:26] 2026-05-09 20:16:25,988 [wrapper] cleanup supervisor_pilot 31840 16260
[2026-05-09 22:16:26] 2026-05-09 20:16:25,992 [wrapper] Test setup, not cleaning
[2026-05-09 22:16:26] 2026-05-09 20:16:25,999 [wrapper] apfmon messages muted
[2026-05-09 22:16:26] 2026-05-09 20:16:26,002 [wrapper] ==== wrapper stdout END ====
[2026-05-09 22:16:26] 2026-05-09 20:16:26,006 [wrapper] ==== wrapper stderr END ====
[2026-05-09 22:16:26]  *** Error codes and diagnostics ***
[2026-05-09 22:16:26]     "exeErrorCode": 0,
[2026-05-09 22:16:26]     "pilotErrorCode": 0,
[2026-05-09 22:16:26]  *** Listing of results directory ***
[2026-05-09 22:16:26] total 615680
[2026-05-09 22:16:26] -rwx------. 1 boinc boinc     36281 May  9 01:44 runpilot2-wrapper.sh
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc    683926 May  9 11:57 pilot3.tar.gz
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc      5631 May  9 15:42 queuedata.json
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc       100 May  9 18:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-09 22:16:26] -rwxr-xr-x. 1 boinc boinc      7986 May  9 18:21 run_atlas
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc       105 May  9 18:21 job.xml
[2026-05-09 22:16:26] -rw-r--r--. 2 boinc boinc 439776875 May  9 18:21 EVNT.46701437._000096.pool.root.1
[2026-05-09 22:16:26] -rw-r--r--. 2 boinc boinc     15667 May  9 18:21 start_atlas.sh
[2026-05-09 22:16:26] drwxrwx--x. 2 boinc boinc        68 May  9 18:21 shared
[2026-05-09 22:16:26] -rw-r--r--. 2 boinc boinc    697417 May  9 18:21 input.tar.gz
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc      6306 May  9 18:21 init_data.xml
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc         0 May  9 18:21 boinc_lockfile
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc      2542 May  9 18:21 pandaJob.out
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc       415 May  9 18:27 workernode_map.json
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc    995469 May  9 18:27 agis_schedconf.cvmfs.json
[2026-05-09 22:16:26] drwx------. 5 boinc boinc      4096 May  9 18:27 pilot3
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc 183202721 May  9 22:14 HITS.50087071._035024.pool.root.1
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc       490 May  9 22:14 boinc_task_state.xml
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc      1018 May  9 22:15 memory_monitor_summary.json
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc   1502997 May  9 22:15 agis_ddmendpoints.agis.ALL.json
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc    409074 May  9 22:15 log.50087071._035024.job.log.tgz.1
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc      6343 May  9 22:15 heartbeat_new.json
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc      6234 May  9 22:15 heartbeat.json
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc        95 May  9 22:15 pilot_heartbeat.json
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc      8192 May  9 22:16 boinc_mmap_file
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc        28 May  9 22:16 wrapper_checkpoint.txt
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc      4883 May  9 22:16 pilotlog.txt
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc   1269803 May  9 22:16 log.50087071._035024.job.log.1
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc       357 May  9 22:16 output.list
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc       410 May  9 22:16 runtime_log
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc   1699840 May  9 22:16 result.tar.gz
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc      8439 May  9 22:16 runtime_log.err
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc       656 May  9 22:16 75656e2dc87c.diag
[2026-05-09 22:16:26] -rw-r--r--. 1 boinc boinc     20628 May  9 22:16 stderr.txt
[2026-05-09 22:16:26] HITS file was successfully produced:
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc 183202721 May  9 22:14 shared/HITS.pool.root.1
[2026-05-09 22:16:26]  *** Contents of shared directory: ***
[2026-05-09 22:16:26] total 610744
[2026-05-09 22:16:26] -rw-r--r--. 2 boinc boinc 439776875 May  9 18:21 ATLAS.root_0
[2026-05-09 22:16:26] -rw-r--r--. 2 boinc boinc     15667 May  9 18:21 start_atlas.sh
[2026-05-09 22:16:26] -rw-r--r--. 2 boinc boinc    697417 May  9 18:21 input.tar.gz
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc 183202721 May  9 22:14 HITS.pool.root.1
[2026-05-09 22:16:26] -rw-------. 1 boinc boinc   1699840 May  9 22:16 result.tar.gz
22:16:27 (12199): run_atlas exited; CPU time 51851.190647
22:16:27 (12199): called boinc_finish(0)

</stderr_txt>
]]>

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