Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:30:52 (3703599): wrapper (7.7.26015): starting
12:30:52 (3703599): wrapper: running run_atlas (--nthreads 4)
[2026-05-10 12:30:52] Arguments: --nthreads 4
[2026-05-10 12:30:52] Threads: 4
[2026-05-10 12:30:52] Checking for CVMFS
[2026-05-10 12:30:52] No cvmfs_config command found, will try listing directly
[2026-05-10 12:30:52] CVMFS is ok
[2026-05-10 12:30:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-10 12:30:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-10 12:30:52] Further information can be found at the LHC@home message board.
[2026-05-10 12:30:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-10 12:30:52] Checking for apptainer binary...
[2026-05-10 12:30:52] which: no apptainer in ((null))
[2026-05-10 12:30:52] apptainer is not installed, using version from CVMFS
[2026-05-10 12:30:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-10 12:30:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-05-10 12:30:52] apptainer works
[2026-05-10 12:30:52] Set ATHENA_PROC_NUMBER=4
[2026-05-10 12:30:52] Set ATHENA_CORE_NUMBER=4
[2026-05-10 12:30:52] Starting ATLAS job with PandaID=7134387240
[2026-05-10 12:30:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-10 15:13:15]  *** The last 200 lines of the pilot log: ***
[2026-05-10 15:13:15] 2026-05-10 13:11:53,879 | INFO     | using path: /var/lib/boinc/var/slot28/slots/5/PanDA_Pilot-7134387240/memory_monitor_summary.json (trf name=prmon)
[2026-05-10 15:13:15] 2026-05-10 13:11:53,879 | INFO     | extracted standard info from prmon json
[2026-05-10 15:13:15] 2026-05-10 13:11:53,880 | INFO     | extracted standard memory fields from prmon json
[2026-05-10 15:13:15] 2026-05-10 13:11:53,880 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-10 15:13:15] 2026-05-10 13:11:53,880 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-10 15:13:15] 2026-05-10 13:11:53,883 | INFO     | fitting pss+swap vs Time
[2026-05-10 15:13:15] 2026-05-10 13:11:53,884 | INFO     | sum of square deviations: 1223016419.5
[2026-05-10 15:13:15] 2026-05-10 13:11:53,885 | INFO     | sum of deviations: 8343130521.499998
[2026-05-10 15:13:15] 2026-05-10 13:11:53,885 | INFO     | mean x (centered): 0.0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,885 | INFO     | mean y: 2322563.3227848103
[2026-05-10 15:13:15] 2026-05-10 13:11:53,885 | INFO     | intersect: 2322563.3227848103
[2026-05-10 15:13:15] 2026-05-10 13:11:53,886 | INFO     | chi2: 1.3542860408268802
[2026-05-10 15:13:15] 2026-05-10 13:11:53,886 | INFO     | sum of square deviations: 1110539892.0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,887 | INFO     | sum of deviations: 8050220935.000007
[2026-05-10 15:13:15] 2026-05-10 13:11:53,887 | INFO     | mean x (centered): 0.0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,887 | INFO     | mean y: 2322167.568627451
[2026-05-10 15:13:15] 2026-05-10 13:11:53,887 | INFO     | intersect: 2322167.568627451
[2026-05-10 15:13:15] 2026-05-10 13:11:53,888 | INFO     | chi2: 1.3553631820431018
[2026-05-10 15:13:15] 2026-05-10 13:11:53,888 | INFO     | current chi2=1.3553631820431018 (change=-0.07953572463642428 %)
[2026-05-10 15:13:15] 2026-05-10 13:11:53,888 | INFO     | right removable region: 152
[2026-05-10 15:13:15] 2026-05-10 13:11:53,888 | INFO     | sum of square deviations: 1110539892.0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,889 | INFO     | sum of deviations: -11000081444.0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,889 | INFO     | mean x (centered): 0.0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,889 | INFO     | mean y: 2348332.424836601
[2026-05-10 15:13:15] 2026-05-10 13:11:53,889 | INFO     | intersect: 2348332.424836601
[2026-05-10 15:13:15] 2026-05-10 13:11:53,890 | INFO     | chi2: 0.031167054434221537
[2026-05-10 15:13:15] 2026-05-10 13:11:53,890 | INFO     | current chi2=0.031167054434221537 (change=97.69863577599959 %)
[2026-05-10 15:13:15] 2026-05-10 13:11:53,890 | INFO     | sum of square deviations: 1005179777.0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,891 | INFO     | sum of deviations: -8546714208.999999
[2026-05-10 15:13:15] 2026-05-10 13:11:53,891 | INFO     | mean x (centered): 0.0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,891 | INFO     | mean y: 2344752.756756757
[2026-05-10 15:13:15] 2026-05-10 13:11:53,891 | INFO     | intersect: 2344752.756756757
[2026-05-10 15:13:15] 2026-05-10 13:11:53,892 | INFO     | chi2: 0.024582310668233916
[2026-05-10 15:13:15] 2026-05-10 13:11:53,892 | INFO     | current chi2=0.024582310668233916 (change=21.127257244937297 %)
[2026-05-10 15:13:15] 2026-05-10 13:11:53,892 | INFO     | left removable region: 10
[2026-05-10 15:13:15] 2026-05-10 13:11:53,892 | INFO     | sum of square deviations: 887813855.5
[2026-05-10 15:13:15] 2026-05-10 13:11:53,893 | INFO     | sum of deviations: -8267138033.0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,893 | INFO     | mean x (centered): 0.0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,893 | INFO     | mean y: 2345191.084507042
[2026-05-10 15:13:15] 2026-05-10 13:11:53,893 | INFO     | intersect: 2345191.084507042
[2026-05-10 15:13:15] 2026-05-10 13:11:53,893 | INFO     | chi2: 0.023658417267147305
[2026-05-10 15:13:15] 2026-05-10 13:11:53,894 | INFO     | current memory leak: -9.31 B/s (using 142 data points, chi2=0.02)
[2026-05-10 15:13:15] 2026-05-10 13:11:53,894 | INFO     | could have reported an average CPU frequency of 2610 MHz (9 samples)
[2026-05-10 15:13:15] 2026-05-10 13:11:53,895 | INFO     | ..............................
[2026-05-10 15:13:15] 2026-05-10 13:11:53,895 | INFO     | . Timing measurements:
[2026-05-10 15:13:15] 2026-05-10 13:11:53,895 | INFO     | . get job = 0 s
[2026-05-10 15:13:15] 2026-05-10 13:11:53,895 | INFO     | . initial setup = 6 s
[2026-05-10 15:13:15] 2026-05-10 13:11:53,895 | INFO     | . payload setup = 10 s
[2026-05-10 15:13:15] 2026-05-10 13:11:53,895 | INFO     | . stage-in = 0 s
[2026-05-10 15:13:15] 2026-05-10 13:11:53,895 | INFO     | . payload execution = 9613 s
[2026-05-10 15:13:15] 2026-05-10 13:11:53,895 | INFO     | . stage-out = 1 s
[2026-05-10 15:13:15] 2026-05-10 13:11:53,895 | INFO     | . log creation = 0 s
[2026-05-10 15:13:15] 2026-05-10 13:11:53,895 | INFO     | ..............................
[2026-05-10 15:13:15] 2026-05-10 13:11:53,997 | INFO     | 
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | job summary report
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | --------------------------------------------------
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | PanDA job id: 7134387240
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | task id: 50087071
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | errors: (none)
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | pilot state: finished 
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | transexitcode: 0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | exeerrorcode: 0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | exeerrordiag: 
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | exitcode: 0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | exitmsg: OK
[2026-05-10 15:13:15] 2026-05-10 13:11:53,998 | INFO     | cpuconsumptiontime: 36892 s
[2026-05-10 15:13:15] 2026-05-10 13:11:53,999 | INFO     | nevents: 400
[2026-05-10 15:13:15] 2026-05-10 13:11:53,999 | INFO     | neventsw: 0
[2026-05-10 15:13:15] 2026-05-10 13:11:53,999 | INFO     | pid: 3721084
[2026-05-10 15:13:15] 2026-05-10 13:11:53,999 | INFO     | pgrp: 3721084
[2026-05-10 15:13:15] 2026-05-10 13:11:53,999 | INFO     | corecount: 4
[2026-05-10 15:13:15] 2026-05-10 13:11:53,999 | INFO     | event service: False
[2026-05-10 15:13:15] 2026-05-10 13:11:53,999 | INFO     | sizes: {0: 2266136, 1: 2267965, 11: 2267965, 9628: 2296357, 9630: 2305377, 9631: 2305433, 9632: 2305819}
[2026-05-10 15:13:15] 2026-05-10 13:11:53,999 | INFO     | --------------------------------------------------
[2026-05-10 15:13:15] 2026-05-10 13:11:53,999 | INFO     | 
[2026-05-10 15:13:15] 2026-05-10 13:11:53,999 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/5
[2026-05-10 15:13:15] 2026-05-10 13:11:54,025 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,025 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,025 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,025 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,026 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-10 15:13:15] 2026-05-10 13:11:54,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,027 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-10 15:13:15] 2026-05-10 13:11:54,027 | INFO     | job 7134387240 has completed (purged errors)
[2026-05-10 15:13:15] 2026-05-10 13:11:54,027 | INFO     | overall cleanup function is called
[2026-05-10 15:13:15] 2026-05-10 13:11:55,035 | INFO     | --- collectZombieJob: --- 10, [3721084]
[2026-05-10 15:13:15] 2026-05-10 13:11:55,035 | INFO     | zombie collector waiting for pid 3721084
[2026-05-10 15:13:15] 2026-05-10 13:11:55,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-10 15:13:15] 2026-05-10 13:11:55,036 | INFO     | collected zombie processes
[2026-05-10 15:13:15] 2026-05-10 13:11:55,036 | INFO     | will attempt to kill all subprocesses of pid=3721084
[2026-05-10 15:13:15] 2026-05-10 13:11:55,367 | INFO     | process IDs to be killed: [3721084] (in reverse order)
[2026-05-10 15:13:15] 2026-05-10 13:11:55,491 | WARNING  | found no corresponding commands to process id(s)
[2026-05-10 15:13:15] 2026-05-10 13:11:55,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-10 15:13:15] 2026-05-10 13:11:55,503 | INFO     | did not find any defunct processes belonging to 3721084
[2026-05-10 15:13:15] 2026-05-10 13:11:55,515 | INFO     | did not find any defunct processes belonging to 3721084
[2026-05-10 15:13:15] 2026-05-10 13:11:55,515 | INFO     | Ready for new job
[2026-05-10 15:13:15] 2026-05-10 13:11:55,517 | INFO     | ***************************************
[2026-05-10 15:13:15] 2026-05-10 13:11:55,517 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-10 15:13:15] 2026-05-10 13:11:55,517 | INFO     | ***************************************
[2026-05-10 15:13:15] 2026-05-10 13:11:55,517 | INFO     | 
[2026-05-10 15:13:15] 2026-05-10 13:11:55,521 | INFO     | architecture information:
[2026-05-10 15:13:15] 2026-05-10 13:11:55,521 | INFO     | executing command: cat /etc/os-release
[2026-05-10 15:13:15] 2026-05-10 13:11:55,538 | INFO     | cat /etc/os-release:
[2026-05-10 15:13:15] NAME="CentOS Linux"
[2026-05-10 15:13:15] VERSION="7 (Core)"
[2026-05-10 15:13:15] ID="centos"
[2026-05-10 15:13:15] ID_LIKE="rhel fedora"
[2026-05-10 15:13:15] VERSION_ID="7"
[2026-05-10 15:13:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-10 15:13:15] ANSI_COLOR="0;31"
[2026-05-10 15:13:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-10 15:13:15] HOME_URL="https://www.centos.org/"
[2026-05-10 15:13:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-10 15:13:15] 
[2026-05-10 15:13:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-10 15:13:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-10 15:13:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-10 15:13:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-10 15:13:15] 
[2026-05-10 15:13:15] 2026-05-10 13:11:55,538 | INFO     | ***************************************
[2026-05-10 15:13:15] 2026-05-10 13:11:56,040 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/5
[2026-05-10 15:13:15] 2026-05-10 13:11:56,061 | INFO     | sufficient remaining disk space (36792434688 B)
[2026-05-10 15:13:15] 2026-05-10 13:11:56,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-10 15:13:15] 2026-05-10 13:11:56,062 | INFO     | current server update state: UPDATING_FINAL
[2026-05-10 15:13:15] 2026-05-10 13:11:56,062 | INFO     | update_server=False
[2026-05-10 15:13:15] 2026-05-10 13:11:56,062 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-10 15:13:15] 2026-05-10 13:11:56,655 | WARNING  | process 3721084 can no longer be monitored (due to stat problems) - aborting
[2026-05-10 15:13:15] 2026-05-10 13:11:56,925 | INFO     | all job control threads have been joined
[2026-05-10 15:13:15] 2026-05-10 13:11:56,942 | INFO     | using path: /var/lib/boinc/var/slot28/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-05-10 15:13:15] 2026-05-10 13:11:56,943 | INFO     | using path: /var/lib/boinc/var/slot28/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-05-10 15:13:15] 2026-05-10 13:11:56,944 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-10 15:13:15] 2026-05-10 13:11:56,944 | WARNING  | maxPSS not found in memory monitor output
[2026-05-10 15:13:15] 2026-05-10 13:11:56,945 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot28/slots/5/PanDA_Pilot-7134387240/payload.stdout) since it has not been created yet
[2026-05-10 15:13:15] 2026-05-10 13:11:56,945 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/5
[2026-05-10 15:13:15] 2026-05-10 13:11:56,962 | INFO     | sufficient remaining disk space (36791386112 B)
[2026-05-10 15:13:15] 2026-05-10 13:11:56,962 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-05-10 15:13:15] 2026-05-10 13:11:56,962 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot28/slots/5/PanDA_Pilot-7134387240/HITS.50087071._049550.pool.root.1 since it does not exist
[2026-05-10 15:13:15] 2026-05-10 13:11:57,068 | INFO     | [job] retrieve thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:57,081 | INFO     | all data control threads have been joined
[2026-05-10 15:13:15] 2026-05-10 13:11:57,154 | INFO     | all payload control threads have been joined
[2026-05-10 15:13:15] 2026-05-10 13:11:57,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-10 15:13:15] 2026-05-10 13:11:57,277 | INFO     | number of running child processes to parent process 3721084: 1
[2026-05-10 15:13:15] 2026-05-10 13:11:57,277 | INFO     | maximum number of monitored processes: 6
[2026-05-10 15:13:15] 2026-05-10 13:11:57,277 | INFO     | aborting job monitoring since job object (job id=7134387240) has expired
[2026-05-10 15:13:15] 2026-05-10 13:11:57,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-10 15:13:15] 2026-05-10 13:11:57,278 | INFO     | will abort loop
[2026-05-10 15:13:15] 2026-05-10 13:11:57,429 | INFO     | [payload] execute_payloads thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:57,453 | INFO     | [payload] failed_post thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:57,762 | INFO     | [job] validate thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:57,785 | INFO     | [job] create_data_payload thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:57,796 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:57,848 | INFO     | [payload] validate_pre thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:57,916 | INFO     | [payload] validate_post thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:57,930 | INFO     | [job] control thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:58,086 | INFO     | [data] control thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:58,159 | INFO     | [payload] control thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:58,278 | INFO     | [job] job monitor thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:58,469 | INFO     | [data] copytool_in thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:11:58,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-10 15:13:15] 2026-05-10 13:11:59,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-10 15:13:15] 2026-05-10 13:11:59,279 | INFO     | [data] copytool_out thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:12:00,013 | INFO     | [job] queue monitor thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:12:02,995 | INFO     | [data] queue_monitor thread has finished
[2026-05-10 15:13:15] 2026-05-10 13:12:26,250 | INFO     | [monitor] cgroup control has ended
[2026-05-10 15:13:15] 2026-05-10 13:12:27,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23303995586368)>', '<ExcThread(monitor, started 23303757768448)>']
[2026-05-10 15:13:15] 2026-05-10 13:12:27,552 | INFO     | PID=3711504 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-10 15:13:15] 2026-05-10 13:12:27,552 | INFO     | .. there are 11 such processes running
[2026-05-10 15:13:15] 2026-05-10 13:12:27,552 | INFO     | found 0 job(s) in 20 queues
[2026-05-10 15:13:15] 2026-05-10 13:12:27,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-10 15:13:15] 2026-05-10 13:12:27,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-10 15:13:15] 2026-05-10 13:12:27,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-10 15:13:15] 2026-05-10 13:12:27,553 | INFO     | [monitor] control thread has ended
[2026-05-10 15:13:15] 2026-05-10 13:12:32,570 | INFO     | all workflow threads have been joined
[2026-05-10 15:13:15] 2026-05-10 13:12:32,570 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-10 15:13:15] 2026-05-10 13:12:32,571 | INFO     | traces error code: 0
[2026-05-10 15:13:15] 2026-05-10 13:12:32,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-10 15:13:15] 2026-05-10 13:12:32,775 [wrapper] ==== pilot stdout END ====
[2026-05-10 15:13:15] 2026-05-10 13:12:32,779 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-10 15:13:15] 2026-05-10 13:12:32,782 [wrapper] pilotpid: 3711504
[2026-05-10 15:13:15] 2026-05-10 13:12:32,785 [wrapper] Pilot exit status: 0
[2026-05-10 15:13:15] 2026-05-10 13:12:32,798 [wrapper] pandaids: 7134387240
[2026-05-10 15:13:15] 2026-05-10 13:12:32,879 [wrapper] cleanup supervisor_pilot 3938079 3711506
[2026-05-10 15:13:15] 2026-05-10 13:12:32,883 [wrapper] Test setup, not cleaning
[2026-05-10 15:13:15] 2026-05-10 13:12:32,887 [wrapper] apfmon messages muted
[2026-05-10 15:13:15] 2026-05-10 13:12:32,890 [wrapper] ==== wrapper stdout END ====
[2026-05-10 15:13:15] 2026-05-10 13:12:32,893 [wrapper] ==== wrapper stderr END ====
[2026-05-10 15:13:15]  *** Error codes and diagnostics ***
[2026-05-10 15:13:15]     "exeErrorCode": 0,
[2026-05-10 15:13:15]     "pilotErrorCode": 0,
[2026-05-10 15:13:15]  *** Listing of results directory ***
[2026-05-10 15:13:15] total 615036
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc      5631 May  9 17:47 queuedata.json
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc    683926 May  9 17:47 pilot3.tar.gz
[2026-05-10 15:13:15] -rwx------. 1 boinc boinc     36281 May  9 17:47 runpilot2-wrapper.sh
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc       100 May 10 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-10 15:13:15] -rwxr-xr-x. 1 boinc boinc      7986 May 10 12:30 run_atlas
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc       105 May 10 12:30 job.xml
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc      6482 May 10 12:30 init_data.xml
[2026-05-10 15:13:15] -rw-r--r--. 2 boinc boinc 439969413 May 10 12:30 EVNT.46701437._000605.pool.root.1
[2026-05-10 15:13:15] -rw-r--r--. 2 boinc boinc     15667 May 10 12:30 start_atlas.sh
[2026-05-10 15:13:15] drwxrwx--x. 2 boinc boinc      4096 May 10 12:30 shared
[2026-05-10 15:13:15] -rw-r--r--. 2 boinc boinc    697408 May 10 12:30 input.tar.gz
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc         0 May 10 12:30 boinc_lockfile
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc      2545 May 10 12:30 pandaJob.out
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc    995461 May 10 12:31 agis_schedconf.cvmfs.json
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc   1502997 May 10 12:31 agis_ddmendpoints.agis.ALL.json
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc       452 May 10 12:31 workernode_map.json
[2026-05-10 15:13:15] drwx------. 5 boinc boinc      4096 May 10 12:31 pilot3
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc 183218752 May 10 15:11 HITS.50087071._049550.pool.root.1
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc        95 May 10 15:11 pilot_heartbeat.json
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc       487 May 10 15:11 boinc_task_state.xml
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc      1030 May 10 15:11 memory_monitor_summary.json
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc    325327 May 10 15:11 log.50087071._049550.job.log.tgz.1
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc      6425 May 10 15:11 heartbeat_new.json
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc      6316 May 10 15:11 heartbeat.json
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc      6372 May 10 15:12 pilotlog.txt
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc    921026 May 10 15:12 log.50087071._049550.job.log.1
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc       357 May 10 15:12 output.list
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc       410 May 10 15:12 runtime_log
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc   1259520 May 10 15:12 result.tar.gz
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc      8827 May 10 15:12 runtime_log.err
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc       663 May 10 15:12 571cb017c1a5.diag
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc        26 May 10 15:13 wrapper_checkpoint.txt
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc      8192 May 10 15:13 boinc_mmap_file
[2026-05-10 15:13:15] -rw-r--r--. 1 boinc boinc     14745 May 10 15:13 stderr.txt
[2026-05-10 15:13:15] HITS file was successfully produced:
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc 183218752 May 10 15:11 shared/HITS.pool.root.1
[2026-05-10 15:13:15]  *** Contents of shared directory: ***
[2026-05-10 15:13:15] total 610528
[2026-05-10 15:13:15] -rw-r--r--. 2 boinc boinc 439969413 May 10 12:30 ATLAS.root_0
[2026-05-10 15:13:15] -rw-r--r--. 2 boinc boinc     15667 May 10 12:30 start_atlas.sh
[2026-05-10 15:13:15] -rw-r--r--. 2 boinc boinc    697408 May 10 12:30 input.tar.gz
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc 183218752 May 10 15:11 HITS.pool.root.1
[2026-05-10 15:13:15] -rw-------. 1 boinc boinc   1259520 May 10 15:12 result.tar.gz
15:13:17 (3703599): run_atlas exited; CPU time 37243.567864
15:13:17 (3703599): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN