Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:11:16 (2279490): wrapper (7.7.26015): starting
17:11:16 (2279490): wrapper: running run_atlas (--nthreads 12)
[2026-05-09 17:11:16] Arguments: --nthreads 12
[2026-05-09 17:11:16] Threads: 12
[2026-05-09 17:11:16] Checking for CVMFS
[2026-05-09 17:11:16] No cvmfs_config command found, will try listing directly
[2026-05-09 17:11:16] CVMFS is ok
[2026-05-09 17:11:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-09 17:11:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-09 17:11:16] Further information can be found at the LHC@home message board.
[2026-05-09 17:11:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-09 17:11:16] Checking for apptainer binary...
[2026-05-09 17:11:16] which: no apptainer in ((null))
[2026-05-09 17:11:16] apptainer is not installed, using version from CVMFS
[2026-05-09 17:11:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-09 17:11:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/23/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-05-09 17:11:16] apptainer works
[2026-05-09 17:11:16] Set ATHENA_PROC_NUMBER=12
[2026-05-09 17:11:16] Set ATHENA_CORE_NUMBER=12
[2026-05-09 17:11:16] Starting ATLAS job with PandaID=7134370455
[2026-05-09 17:11:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-09 17:38:36]  *** The last 200 lines of the pilot log: ***
[2026-05-09 17:38:36]  ddmendpoint_alt=None
[2026-05-09 17:38:36]  direct_access_lan=False
[2026-05-09 17:38:36]  direct_access_wan=False
[2026-05-09 17:38:36]  domain=
[2026-05-09 17:38:36]  filesize=321122
[2026-05-09 17:38:36]  filetype=log
[2026-05-09 17:38:36]  guid=d604a793-bb58-4970-9d81-5a496fbf34b4
[2026-05-09 17:38:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-09 17:38:36]  is_altstaged=None
[2026-05-09 17:38:36]  is_tar=False
[2026-05-09 17:38:36]  lfn=log.50087071._043675.job.log.tgz.1
[2026-05-09 17:38:36]  mtime=0
[2026-05-09 17:38:36]  protocol_id=None
[2026-05-09 17:38:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-09 17:38:36]  replicas=None
[2026-05-09 17:38:36]  scope=mc23_13p6TeV
[2026-05-09 17:38:36]  status=None
[2026-05-09 17:38:36]  status_code=0
[2026-05-09 17:38:36]  storage_token=
[2026-05-09 17:38:36]  surl=/var/lib/boinc/var/slot60/slots/23/PanDA_Pilot-7134370455/log.50087071._043675.job.log.tgz.1
[2026-05-09 17:38:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/c9/log.50087071._043675.job.log.tgz.1
[2026-05-09 17:38:36]  workdir=None
[2026-05-09 17:38:36] ]
[2026-05-09 17:38:36] 2026-05-09 15:37:52,038 | INFO     | transferring file log.50087071._043675.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/23/PanDA_Pilot-7134370455/log.50087071._043675.job.log.tgz.1 to /var/lib/
[2026-05-09 17:38:36] 2026-05-09 15:37:52,038 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/23/PanDA_Pilot-7134370455/log.50087071._043675.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/23/
[2026-05-09 17:38:36] 2026-05-09 15:37:52,054 | INFO     | adding to output.list: log.50087071._043675.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/c9/log.50087071._043675.job.log.tg
[2026-05-09 17:38:36] 2026-05-09 15:37:52,054 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-09 17:38:36] 2026-05-09 15:37:52,054 | INFO     | summary of transferred files:
[2026-05-09 17:38:36] 2026-05-09 15:37:52,054 | INFO     |  -- lfn=log.50087071._043675.job.log.tgz.1, status_code=0, status=transferred
[2026-05-09 17:38:36] 2026-05-09 15:37:52,057 | INFO     | stage-out finished correctly
[2026-05-09 17:38:36] 2026-05-09 15:37:52,102 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-09 17:38:36] 2026-05-09 15:37:52,943 | INFO     | job 7134370455 has state=finished
[2026-05-09 17:38:36] 2026-05-09 15:37:52,943 | INFO     | preparing for final server update for job 7134370455 in state='finished'
[2026-05-09 17:38:36] 2026-05-09 15:37:52,943 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/23/PanDA_Pilot-7134370455/jobReport.json
[2026-05-09 17:38:36] 2026-05-09 15:37:52,945 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/23/workernode_map.json
[2026-05-09 17:38:36] 2026-05-09 15:37:52,945 | INFO     | this job has now completed (state=finished)
[2026-05-09 17:38:36] 2026-05-09 15:37:52,945 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-09 17:38:36] 2026-05-09 15:37:52,945 | INFO     | log transfer has been attempted: DONE
[2026-05-09 17:38:36] 2026-05-09 15:37:52,945 | INFO     | job 7134370455 has finished - writing final server update
[2026-05-09 17:38:36] 2026-05-09 15:37:52,945 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1977552/.job.ad'
[2026-05-09 17:38:36] 2026-05-09 15:37:52,945 | INFO     | total number of processed events: 400 (read)
[2026-05-09 17:38:36] 2026-05-09 15:37:52,963 | INFO     | using path: /var/lib/boinc/var/slot60/slots/23/PanDA_Pilot-7134370455/memory_monitor_summary.json (trf name=prmon)
[2026-05-09 17:38:36] 2026-05-09 15:37:52,964 | INFO     | extracted standard info from prmon json
[2026-05-09 17:38:36] 2026-05-09 15:37:52,964 | INFO     | extracted standard memory fields from prmon json
[2026-05-09 17:38:36] 2026-05-09 15:37:52,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-09 17:38:36] 2026-05-09 15:37:52,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-09 17:38:36] 2026-05-09 15:37:52,965 | INFO     | fitting pss+swap vs Time
[2026-05-09 17:38:36] 2026-05-09 15:37:52,965 | INFO     | sum of square deviations: 2120970.0
[2026-05-09 17:38:36] 2026-05-09 15:37:52,965 | INFO     | sum of deviations: 20334227.999999996
[2026-05-09 17:38:36] 2026-05-09 15:37:52,965 | INFO     | mean x (centered): 0.0
[2026-05-09 17:38:36] 2026-05-09 15:37:52,965 | INFO     | mean y: 2680086.789473684
[2026-05-09 17:38:36] 2026-05-09 15:37:52,965 | INFO     | intersect: 2680086.789473684
[2026-05-09 17:38:36] 2026-05-09 15:37:52,965 | INFO     | chi2: 9.39508256642967e-05
[2026-05-09 17:38:36] 2026-05-09 15:37:52,965 | INFO     | current memory leak: 9.59 B/s (using 19 data points, chi2=0.00)
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | could have reported an average CPU frequency of 3629 MHz (4 samples)
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | ..............................
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | . Timing measurements:
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | . get job = 0 s
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | . initial setup = 4 s
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | . payload setup = 6 s
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | . stage-in = 0 s
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | . payload execution = 1562 s
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | . stage-out = 0 s
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | . log creation = 0 s
[2026-05-09 17:38:36] 2026-05-09 15:37:52,966 | INFO     | ..............................
[2026-05-09 17:38:36] 2026-05-09 15:37:53,011 | INFO     | 
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | job summary report
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | --------------------------------------------------
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | PanDA job id: 7134370455
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | task id: 50087071
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | errors: (none)
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | pilot state: finished 
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | transexitcode: 0
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | exeerrorcode: 0
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | exeerrordiag: 
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | exitcode: 0
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | exitmsg: OK
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | cpuconsumptiontime: 16644 s
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | nevents: 400
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | neventsw: 0
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | pid: 2289955
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | pgrp: 2289955
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | corecount: 12
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | event service: False
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | sizes: {0: 2266133, 1: 2267962, 11: 2267962, 1572: 2292814, 1573: 2301892, 1574: 2302030}
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | --------------------------------------------------
[2026-05-09 17:38:36] 2026-05-09 15:37:53,012 | INFO     | 
[2026-05-09 17:38:36] 2026-05-09 15:37:53,013 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/23
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-09 17:38:36] 2026-05-09 15:37:53,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,031 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-09 17:38:36] 2026-05-09 15:37:53,031 | INFO     | job 7134370455 has completed (purged errors)
[2026-05-09 17:38:36] 2026-05-09 15:37:53,031 | INFO     | overall cleanup function is called
[2026-05-09 17:38:36] 2026-05-09 15:37:54,037 | INFO     | --- collectZombieJob: --- 10, [2289955]
[2026-05-09 17:38:36] 2026-05-09 15:37:54,038 | INFO     | zombie collector waiting for pid 2289955
[2026-05-09 17:38:36] 2026-05-09 15:37:54,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-09 17:38:36] 2026-05-09 15:37:54,038 | INFO     | collected zombie processes
[2026-05-09 17:38:36] 2026-05-09 15:37:54,038 | INFO     | will attempt to kill all subprocesses of pid=2289955
[2026-05-09 17:38:36] 2026-05-09 15:37:54,335 | INFO     | process IDs to be killed: [2289955] (in reverse order)
[2026-05-09 17:38:36] 2026-05-09 15:37:54,490 | WARNING  | found no corresponding commands to process id(s)
[2026-05-09 17:38:36] 2026-05-09 15:37:54,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-09 17:38:36] 2026-05-09 15:37:54,514 | INFO     | did not find any defunct processes belonging to 2289955
[2026-05-09 17:38:36] 2026-05-09 15:37:54,536 | INFO     | did not find any defunct processes belonging to 2289955
[2026-05-09 17:38:36] 2026-05-09 15:37:54,536 | INFO     | Ready for new job
[2026-05-09 17:38:36] 2026-05-09 15:37:54,537 | INFO     | ***************************************
[2026-05-09 17:38:36] 2026-05-09 15:37:54,537 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-09 17:38:36] 2026-05-09 15:37:54,537 | INFO     | ***************************************
[2026-05-09 17:38:36] 2026-05-09 15:37:54,537 | INFO     | 
[2026-05-09 17:38:36] 2026-05-09 15:37:54,542 | INFO     | architecture information:
[2026-05-09 17:38:36] 2026-05-09 15:37:54,543 | INFO     | executing command: cat /etc/os-release
[2026-05-09 17:38:36] 2026-05-09 15:37:54,555 | INFO     | cat /etc/os-release:
[2026-05-09 17:38:36] NAME="CentOS Linux"
[2026-05-09 17:38:36] VERSION="7 (Core)"
[2026-05-09 17:38:36] ID="centos"
[2026-05-09 17:38:36] ID_LIKE="rhel fedora"
[2026-05-09 17:38:36] VERSION_ID="7"
[2026-05-09 17:38:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-09 17:38:36] ANSI_COLOR="0;31"
[2026-05-09 17:38:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-09 17:38:36] HOME_URL="https://www.centos.org/"
[2026-05-09 17:38:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-09 17:38:36] 
[2026-05-09 17:38:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-09 17:38:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-09 17:38:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-09 17:38:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-09 17:38:36] 
[2026-05-09 17:38:36] 2026-05-09 15:37:54,555 | INFO     | ***************************************
[2026-05-09 17:38:36] 2026-05-09 15:37:55,058 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/23
[2026-05-09 17:38:36] 2026-05-09 15:37:55,076 | INFO     | sufficient remaining disk space (88104501248 B)
[2026-05-09 17:38:36] 2026-05-09 15:37:55,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-09 17:38:36] 2026-05-09 15:37:55,076 | INFO     | current server update state: UPDATING_FINAL
[2026-05-09 17:38:36] 2026-05-09 15:37:55,076 | INFO     | update_server=False
[2026-05-09 17:38:36] 2026-05-09 15:37:55,076 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-09 17:38:36] 2026-05-09 15:37:55,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-09 17:38:36] 2026-05-09 15:37:55,077 | INFO     | aborting loop
[2026-05-09 17:38:36] 2026-05-09 15:37:55,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-09 17:38:36] 2026-05-09 15:37:55,456 | INFO     | all data control threads have been joined
[2026-05-09 17:38:36] 2026-05-09 15:37:55,729 | INFO     | all payload control threads have been joined
[2026-05-09 17:38:36] 2026-05-09 15:37:56,082 | INFO     | [job] job monitor thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:56,082 | INFO     | [job] retrieve thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:56,126 | INFO     | all job control threads have been joined
[2026-05-09 17:38:36] 2026-05-09 15:37:56,221 | INFO     | [payload] failed_post thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:56,436 | INFO     | [job] validate thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:56,462 | INFO     | [data] control thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:56,571 | INFO     | [job] create_data_payload thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:56,685 | INFO     | [payload] validate_pre thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:56,734 | INFO     | [payload] control thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:56,888 | INFO     | [data] copytool_in thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:57,080 | INFO     | [payload] execute_payloads thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:57,113 | INFO     | [data] copytool_out thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:57,131 | INFO     | [job] control thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:57,425 | INFO     | [payload] validate_post thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:37:58,022 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-09 17:38:36] 2026-05-09 15:37:58,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-09 17:38:36] 2026-05-09 15:37:59,028 | INFO     | [job] queue monitor thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:38:02,160 | INFO     | [data] queue_monitor thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:38:05,126 | INFO     | job.realtimelogging is not enabled
[2026-05-09 17:38:36] 2026-05-09 15:38:06,131 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-09 17:38:36] 2026-05-09 15:38:24,774 | INFO     | PID=2284035 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-09 17:38:36] 2026-05-09 15:38:24,774 | INFO     | .. there are 15 such processes running
[2026-05-09 17:38:36] 2026-05-09 15:38:24,775 | INFO     | found 0 job(s) in 20 queues
[2026-05-09 17:38:36] 2026-05-09 15:38:24,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-09 17:38:36] 2026-05-09 15:38:24,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-09 17:38:36] 2026-05-09 15:38:30,548 | INFO     | [monitor] cgroup control has ended
[2026-05-09 17:38:36] 2026-05-09 15:38:31,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22637060052800)>', '<ExcThread(monitor, started 22636750944000)>']
[2026-05-09 17:38:36] 2026-05-09 15:38:31,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-09 17:38:36] 2026-05-09 15:38:31,809 | INFO     | [monitor] control thread has ended
[2026-05-09 17:38:36] 2026-05-09 15:38:36,505 | INFO     | all workflow threads have been joined
[2026-05-09 17:38:36] 2026-05-09 15:38:36,506 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-09 17:38:36] 2026-05-09 15:38:36,506 | INFO     | traces error code: 0
[2026-05-09 17:38:36] 2026-05-09 15:38:36,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-09 17:38:36] 2026-05-09 15:38:36,639 [wrapper] ==== pilot stdout END ====
[2026-05-09 17:38:36] 2026-05-09 15:38:36,641 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-09 17:38:36] 2026-05-09 15:38:36,643 [wrapper] pilotpid: 2284035
[2026-05-09 17:38:36] 2026-05-09 15:38:36,645 [wrapper] Pilot exit status: 0
[2026-05-09 17:38:36] 2026-05-09 15:38:36,652 [wrapper] pandaids: 7134370455
[2026-05-09 17:38:36] 2026-05-09 15:38:36,750 [wrapper] cleanup supervisor_pilot 2367737 2284036
[2026-05-09 17:38:36] 2026-05-09 15:38:36,753 [wrapper] Test setup, not cleaning
[2026-05-09 17:38:36] 2026-05-09 15:38:36,755 [wrapper] apfmon messages muted
[2026-05-09 17:38:36] 2026-05-09 15:38:36,757 [wrapper] ==== wrapper stdout END ====
[2026-05-09 17:38:36] 2026-05-09 15:38:36,760 [wrapper] ==== wrapper stderr END ====
[2026-05-09 17:38:36]  *** Error codes and diagnostics ***
[2026-05-09 17:38:36]     "exeErrorCode": 0,
[2026-05-09 17:38:36]     "pilotErrorCode": 0,
[2026-05-09 17:38:36]  *** Listing of results directory ***
[2026-05-09 17:38:36] total 615432
[2026-05-09 17:38:36] -rwx------. 1 boinc boinc     36281 May  9 16:14 runpilot2-wrapper.sh
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc      5631 May  9 16:15 queuedata.json
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc    683926 May  9 16:15 pilot3.tar.gz
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc       100 May  9 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-09 17:38:36] -rwxr-xr-x. 1 boinc boinc      7986 May  9 17:11 run_atlas
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc       105 May  9 17:11 job.xml
[2026-05-09 17:38:36] -rw-r--r--. 2 boinc boinc 438050273 May  9 17:11 EVNT.46701437._000492.pool.root.1
[2026-05-09 17:38:36] -rw-r--r--. 2 boinc boinc     15667 May  9 17:11 start_atlas.sh
[2026-05-09 17:38:36] drwxrwx--x. 2 boinc boinc      4096 May  9 17:11 shared
[2026-05-09 17:38:36] -rw-r--r--. 2 boinc boinc    697416 May  9 17:11 input.tar.gz
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc      6629 May  9 17:11 init_data.xml
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc         0 May  9 17:11 boinc_lockfile
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc      2543 May  9 17:11 pandaJob.out
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc    994151 May  9 17:11 agis_schedconf.cvmfs.json
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc   1502997 May  9 17:11 agis_ddmendpoints.agis.ALL.json
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc       442 May  9 17:11 workernode_map.json
[2026-05-09 17:38:36] drwx------. 5 boinc boinc      4096 May  9 17:11 pilot3
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc 186996926 May  9 17:37 HITS.50087071._043675.pool.root.1
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc       488 May  9 17:37 boinc_task_state.xml
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc      1044 May  9 17:37 memory_monitor_summary.json
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc    321122 May  9 17:37 log.50087071._043675.job.log.tgz.1
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc      6378 May  9 17:37 heartbeat_new.json
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc      6269 May  9 17:37 heartbeat.json
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc        95 May  9 17:38 pilot_heartbeat.json
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc      8192 May  9 17:38 boinc_mmap_file
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc        27 May  9 17:38 wrapper_checkpoint.txt
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc      4905 May  9 17:38 pilotlog.txt
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc    196925 May  9 17:38 log.50087071._043675.job.log.1
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc       357 May  9 17:38 output.list
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc       410 May  9 17:38 runtime_log
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc    532480 May  9 17:38 result.tar.gz
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc      8846 May  9 17:38 runtime_log.err
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc       660 May  9 17:38 41352dadb790.diag
[2026-05-09 17:38:36] -rw-r--r--. 1 boinc boinc     20675 May  9 17:38 stderr.txt
[2026-05-09 17:38:36] HITS file was successfully produced:
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc 186996926 May  9 17:37 shared/HITS.pool.root.1
[2026-05-09 17:38:36]  *** Contents of shared directory: ***
[2026-05-09 17:38:36] total 611628
[2026-05-09 17:38:36] -rw-r--r--. 2 boinc boinc 438050273 May  9 17:11 ATLAS.root_0
[2026-05-09 17:38:36] -rw-r--r--. 2 boinc boinc     15667 May  9 17:11 start_atlas.sh
[2026-05-09 17:38:36] -rw-r--r--. 2 boinc boinc    697416 May  9 17:11 input.tar.gz
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc 186996926 May  9 17:37 HITS.pool.root.1
[2026-05-09 17:38:36] -rw-------. 1 boinc boinc    532480 May  9 17:38 result.tar.gz
17:38:38 (2279490): run_atlas exited; CPU time 16686.212095
17:38:38 (2279490): called boinc_finish(0)

</stderr_txt>
]]>

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