Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:31:15 (3226235): wrapper (7.7.26015): starting
06:31:15 (3226235): wrapper: running run_atlas (--nthreads 4)
[2026-05-10 06:31:16] Arguments: --nthreads 4
[2026-05-10 06:31:16] Threads: 4
[2026-05-10 06:31:16] Checking for CVMFS
[2026-05-10 06:31:16] No cvmfs_config command found, will try listing directly
[2026-05-10 06:31:16] CVMFS is ok
[2026-05-10 06:31:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-10 06:31:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-10 06:31:16] Further information can be found at the LHC@home message board.
[2026-05-10 06:31:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-10 06:31:16] Checking for apptainer binary...
[2026-05-10 06:31:16] which: no apptainer in ((null))
[2026-05-10 06:31:16] apptainer is not installed, using version from CVMFS
[2026-05-10 06:31:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-10 06:31:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-05-10 06:31:16] apptainer works
[2026-05-10 06:31:16] Set ATHENA_PROC_NUMBER=4
[2026-05-10 06:31:16] Set ATHENA_CORE_NUMBER=4
[2026-05-10 06:31:16] Starting ATLAS job with PandaID=7134476575
[2026-05-10 06:31:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-10 09:30:24]  *** The last 200 lines of the pilot log: ***
[2026-05-10 09:30:24] 2026-05-10 07:25:01,896 | INFO     | mean x (centered): 0.0
[2026-05-10 09:30:24] 2026-05-10 07:25:01,896 | INFO     | mean y: 2326066.976608187
[2026-05-10 09:30:24] 2026-05-10 07:25:01,896 | INFO     | intersect: 2326066.976608187
[2026-05-10 09:30:24] 2026-05-10 07:25:01,896 | INFO     | chi2: 2.034384936623048
[2026-05-10 09:30:24] 2026-05-10 07:25:01,897 | INFO     | sum of square deviations: 1418361477.5
[2026-05-10 09:30:24] 2026-05-10 07:25:01,898 | INFO     | sum of deviations: 8180013471.500001
[2026-05-10 09:30:24] 2026-05-10 07:25:01,898 | INFO     | mean x (centered): 0.0
[2026-05-10 09:30:24] 2026-05-10 07:25:01,898 | INFO     | mean y: 2337074.608433735
[2026-05-10 09:30:24] 2026-05-10 07:25:01,898 | INFO     | intersect: 2337074.608433735
[2026-05-10 09:30:24] 2026-05-10 07:25:01,898 | INFO     | chi2: 1.3719564700727351
[2026-05-10 09:30:24] 2026-05-10 07:25:01,899 | INFO     | current chi2=1.3719564700727351 (change=32.56160889835839 %)
[2026-05-10 09:30:24] 2026-05-10 07:25:01,899 | INFO     | sum of square deviations: 1294014960.0
[2026-05-10 09:30:24] 2026-05-10 07:25:01,900 | INFO     | sum of deviations: 7978657930.999998
[2026-05-10 09:30:24] 2026-05-10 07:25:01,900 | INFO     | mean x (centered): 0.0
[2026-05-10 09:30:24] 2026-05-10 07:25:01,900 | INFO     | mean y: 2336827.596273292
[2026-05-10 09:30:24] 2026-05-10 07:25:01,900 | INFO     | intersect: 2336827.596273292
[2026-05-10 09:30:24] 2026-05-10 07:25:01,901 | INFO     | chi2: 1.3730030786634366
[2026-05-10 09:30:24] 2026-05-10 07:25:01,901 | INFO     | current chi2=1.3730030786634366 (change=-0.07628584532612799 %)
[2026-05-10 09:30:24] 2026-05-10 07:25:01,901 | INFO     | right removable region: 160
[2026-05-10 09:30:24] 2026-05-10 07:25:01,901 | INFO     | sum of square deviations: 1418361477.5
[2026-05-10 09:30:24] 2026-05-10 07:25:01,902 | INFO     | sum of deviations: -22895658931.0
[2026-05-10 09:30:24] 2026-05-10 07:25:01,902 | INFO     | mean x (centered): 0.0
[2026-05-10 09:30:24] 2026-05-10 07:25:01,903 | INFO     | mean y: 2350284.8313253014
[2026-05-10 09:30:24] 2026-05-10 07:25:01,903 | INFO     | intersect: 2350284.8313253014
[2026-05-10 09:30:24] 2026-05-10 07:25:01,903 | INFO     | chi2: 0.7144654118200886
[2026-05-10 09:30:24] 2026-05-10 07:25:01,903 | INFO     | current chi2=0.7144654118200886 (change=64.88051995675625 %)
[2026-05-10 09:30:24] 2026-05-10 07:25:01,903 | INFO     | sum of square deviations: 1294014960.0
[2026-05-10 09:30:24] 2026-05-10 07:25:01,904 | INFO     | sum of deviations: -20735405114.0
[2026-05-10 09:30:24] 2026-05-10 07:25:01,905 | INFO     | mean x (centered): 0.0
[2026-05-10 09:30:24] 2026-05-10 07:25:01,905 | INFO     | mean y: 2347600.3602484474
[2026-05-10 09:30:24] 2026-05-10 07:25:01,905 | INFO     | intersect: 2347600.3602484474
[2026-05-10 09:30:24] 2026-05-10 07:25:01,905 | INFO     | chi2: 0.7097833048327846
[2026-05-10 09:30:24] 2026-05-10 07:25:01,905 | INFO     | current chi2=0.7097833048327846 (change=0.6553301125349639 %)
[2026-05-10 09:30:24] 2026-05-10 07:25:01,905 | INFO     | left removable region: 10
[2026-05-10 09:30:24] 2026-05-10 07:25:01,906 | INFO     | sum of square deviations: 1046484737.5
[2026-05-10 09:30:24] 2026-05-10 07:25:01,907 | INFO     | sum of deviations: -10572182212.5
[2026-05-10 09:30:24] 2026-05-10 07:25:01,907 | INFO     | mean x (centered): 0.0
[2026-05-10 09:30:24] 2026-05-10 07:25:01,907 | INFO     | mean y: 2360601.7
[2026-05-10 09:30:24] 2026-05-10 07:25:01,907 | INFO     | intersect: 2360601.7
[2026-05-10 09:30:24] 2026-05-10 07:25:01,907 | INFO     | chi2: 0.025106920972036418
[2026-05-10 09:30:24] 2026-05-10 07:25:01,908 | INFO     | current memory leak: -10.10 B/s (using 150 data points, chi2=0.03)
[2026-05-10 09:30:24] 2026-05-10 07:25:01,908 | INFO     | could have reported an average CPU frequency of 2517 MHz (9 samples)
[2026-05-10 09:30:24] 2026-05-10 07:25:01,908 | INFO     | ..............................
[2026-05-10 09:30:24] 2026-05-10 07:25:01,908 | INFO     | . Timing measurements:
[2026-05-10 09:30:24] 2026-05-10 07:25:01,908 | INFO     | . get job = 0 s
[2026-05-10 09:30:24] 2026-05-10 07:25:01,909 | INFO     | . initial setup = 6 s
[2026-05-10 09:30:24] 2026-05-10 07:25:01,909 | INFO     | . payload setup = 11 s
[2026-05-10 09:30:24] 2026-05-10 07:25:01,909 | INFO     | . stage-in = 0 s
[2026-05-10 09:30:24] 2026-05-10 07:25:01,909 | INFO     | . payload execution = 10378 s
[2026-05-10 09:30:24] 2026-05-10 07:25:01,909 | INFO     | . stage-out = 0 s
[2026-05-10 09:30:24] 2026-05-10 07:25:01,909 | INFO     | . log creation = 0 s
[2026-05-10 09:30:24] 2026-05-10 07:25:01,909 | INFO     | ..............................
[2026-05-10 09:30:24] 2026-05-10 07:25:02,362 | INFO     | 
[2026-05-10 09:30:24] 2026-05-10 07:25:02,363 | INFO     | job summary report
[2026-05-10 09:30:24] 2026-05-10 07:25:02,363 | INFO     | --------------------------------------------------
[2026-05-10 09:30:24] 2026-05-10 07:25:02,363 | INFO     | PanDA job id: 7134476575
[2026-05-10 09:30:24] 2026-05-10 07:25:02,363 | INFO     | task id: 50010997
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | errors: (none)
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | pilot state: finished 
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | transexitcode: 0
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | exeerrorcode: 0
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | exeerrordiag: 
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | exitcode: 0
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | exitmsg: OK
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | cpuconsumptiontime: 39616 s
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | nevents: 400
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | neventsw: 0
[2026-05-10 09:30:24] 2026-05-10 07:25:02,364 | INFO     | pid: 3243637
[2026-05-10 09:30:24] 2026-05-10 07:25:02,365 | INFO     | pgrp: 3243637
[2026-05-10 09:30:24] 2026-05-10 07:25:02,365 | INFO     | corecount: 4
[2026-05-10 09:30:24] 2026-05-10 07:25:02,365 | INFO     | event service: False
[2026-05-10 09:30:24] 2026-05-10 07:25:02,365 | INFO     | sizes: {0: 2266412, 1: 2267986, 11: 2268014, 10391: 2296747, 10392: 2305767, 10393: 2305823, 10395: 2306209}
[2026-05-10 09:30:24] 2026-05-10 07:25:02,365 | INFO     | --------------------------------------------------
[2026-05-10 09:30:24] 2026-05-10 07:25:02,365 | INFO     | 
[2026-05-10 09:30:24] 2026-05-10 07:25:02,365 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/5
[2026-05-10 09:30:24] 2026-05-10 07:25:02,394 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,395 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,395 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,395 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,396 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-10 09:30:24] 2026-05-10 07:25:02,397 | INFO     | job 7134476575 has completed (purged errors)
[2026-05-10 09:30:24] 2026-05-10 07:25:02,397 | INFO     | overall cleanup function is called
[2026-05-10 09:30:24] 2026-05-10 07:25:03,404 | INFO     | --- collectZombieJob: --- 10, [3243637]
[2026-05-10 09:30:24] 2026-05-10 07:25:03,404 | INFO     | zombie collector waiting for pid 3243637
[2026-05-10 09:30:24] 2026-05-10 07:25:03,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-10 09:30:24] 2026-05-10 07:25:03,404 | INFO     | collected zombie processes
[2026-05-10 09:30:24] 2026-05-10 07:25:03,405 | INFO     | will attempt to kill all subprocesses of pid=3243637
[2026-05-10 09:30:24] 2026-05-10 07:25:03,747 | INFO     | process IDs to be killed: [3243637] (in reverse order)
[2026-05-10 09:30:24] 2026-05-10 07:25:03,884 | WARNING  | found no corresponding commands to process id(s)
[2026-05-10 09:30:24] 2026-05-10 07:25:03,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-10 09:30:24] 2026-05-10 07:25:03,898 | INFO     | did not find any defunct processes belonging to 3243637
[2026-05-10 09:30:24] 2026-05-10 07:25:03,911 | INFO     | did not find any defunct processes belonging to 3243637
[2026-05-10 09:30:24] 2026-05-10 07:25:03,911 | INFO     | Ready for new job
[2026-05-10 09:30:24] 2026-05-10 07:25:03,913 | INFO     | ***************************************
[2026-05-10 09:30:24] 2026-05-10 07:25:03,913 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-10 09:30:24] 2026-05-10 07:25:03,913 | INFO     | ***************************************
[2026-05-10 09:30:24] 2026-05-10 07:25:03,914 | INFO     | 
[2026-05-10 09:30:24] 2026-05-10 07:25:03,918 | INFO     | architecture information:
[2026-05-10 09:30:24] 2026-05-10 07:25:03,918 | INFO     | executing command: cat /etc/os-release
[2026-05-10 09:30:24] 2026-05-10 07:25:03,932 | INFO     | cat /etc/os-release:
[2026-05-10 09:30:24] NAME="CentOS Linux"
[2026-05-10 09:30:24] VERSION="7 (Core)"
[2026-05-10 09:30:24] ID="centos"
[2026-05-10 09:30:24] ID_LIKE="rhel fedora"
[2026-05-10 09:30:24] VERSION_ID="7"
[2026-05-10 09:30:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-10 09:30:24] ANSI_COLOR="0;31"
[2026-05-10 09:30:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-10 09:30:24] HOME_URL="https://www.centos.org/"
[2026-05-10 09:30:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-10 09:30:24] 
[2026-05-10 09:30:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-10 09:30:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-10 09:30:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-10 09:30:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-10 09:30:24] 
[2026-05-10 09:30:24] 2026-05-10 07:25:03,932 | INFO     | ***************************************
[2026-05-10 09:30:24] 2026-05-10 07:25:04,435 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/5
[2026-05-10 09:30:24] 2026-05-10 07:25:04,451 | INFO     | sufficient remaining disk space (28348252160 B)
[2026-05-10 09:30:24] 2026-05-10 07:25:04,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-10 09:30:24] 2026-05-10 07:25:04,451 | INFO     | current server update state: UPDATING_FINAL
[2026-05-10 09:30:24] 2026-05-10 07:25:04,451 | INFO     | update_server=False
[2026-05-10 09:30:24] 2026-05-10 07:25:04,451 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-10 09:30:24] 2026-05-10 07:25:04,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-10 09:30:24] 2026-05-10 07:25:05,129 | INFO     | all data control threads have been joined
[2026-05-10 09:30:24] 2026-05-10 07:25:05,135 | INFO     | all payload control threads have been joined
[2026-05-10 09:30:24] 2026-05-10 07:25:05,457 | INFO     | [job] retrieve thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:05,516 | INFO     | [job] create_data_payload thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:05,874 | INFO     | [payload] validate_post thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:05,955 | INFO     | [data] copytool_in thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:06,023 | INFO     | all job control threads have been joined
[2026-05-10 09:30:24] 2026-05-10 07:25:06,134 | INFO     | [data] control thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:06,140 | INFO     | [payload] control thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:06,531 | INFO     | [payload] execute_payloads thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:06,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-10 09:30:24] 2026-05-10 07:25:06,654 | INFO     | [job] validate thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:06,803 | INFO     | [data] copytool_out thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:06,837 | WARNING  | process 3243637 can no longer be monitored (due to stat problems) - aborting
[2026-05-10 09:30:24] 2026-05-10 07:25:06,887 | INFO     | [payload] validate_pre thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:06,986 | INFO     | [payload] failed_post thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:07,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-10 09:30:24] 2026-05-10 07:25:07,028 | INFO     | [job] control thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:07,110 | INFO     | using path: /var/lib/boinc/var/slot28/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-05-10 09:30:24] 2026-05-10 07:25:07,111 | INFO     | using path: /var/lib/boinc/var/slot28/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-05-10 09:30:24] 2026-05-10 07:25:07,111 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-10 09:30:24] 2026-05-10 07:25:07,112 | WARNING  | maxPSS not found in memory monitor output
[2026-05-10 09:30:24] 2026-05-10 07:25:07,112 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot28/slots/5/PanDA_Pilot-7134476575/payload.stdout) since it has not been created yet
[2026-05-10 09:30:24] 2026-05-10 07:25:07,112 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/5
[2026-05-10 09:30:24] 2026-05-10 07:25:07,132 | INFO     | sufficient remaining disk space (28348252160 B)
[2026-05-10 09:30:24] 2026-05-10 07:25:07,133 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-05-10 09:30:24] 2026-05-10 07:25:07,133 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot28/slots/5/PanDA_Pilot-7134476575/HITS.50010997._025730.pool.root.1 since it does not exist
[2026-05-10 09:30:24] 2026-05-10 07:25:07,474 | INFO     | number of running child processes to parent process 3243637: 1
[2026-05-10 09:30:24] 2026-05-10 07:25:07,474 | INFO     | maximum number of monitored processes: 6
[2026-05-10 09:30:24] 2026-05-10 07:25:07,475 | INFO     | aborting job monitoring since job object (job id=7134476575) has expired
[2026-05-10 09:30:24] 2026-05-10 07:25:07,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-10 09:30:24] 2026-05-10 07:25:07,475 | INFO     | will abort loop
[2026-05-10 09:30:24] 2026-05-10 07:25:08,030 | INFO     | [job] queue monitor thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:08,480 | INFO     | [job] job monitor thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:10,599 | INFO     | [data] queue_monitor thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:15,215 | INFO     | job.realtimelogging is not enabled
[2026-05-10 09:30:24] 2026-05-10 07:25:16,220 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-10 09:30:24] 2026-05-10 07:25:34,859 | INFO     | PID=3234123 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-10 09:30:24] 2026-05-10 07:25:34,859 | INFO     | .. there are 11 such processes running
[2026-05-10 09:30:24] 2026-05-10 07:25:34,862 | INFO     | found 0 job(s) in 20 queues
[2026-05-10 09:30:24] 2026-05-10 07:25:34,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-10 09:30:24] 2026-05-10 07:25:34,862 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-10 09:30:24] 2026-05-10 07:25:52,395 | INFO     | [monitor] cgroup control has ended
[2026-05-10 09:30:24] 2026-05-10 07:25:53,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22854693455680)>', '<ExcThread(monitor, started 22854387091200)>']
[2026-05-10 09:30:24] 2026-05-10 07:25:53,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-10 09:30:24] 2026-05-10 07:25:53,954 | INFO     | [monitor] control thread has ended
[2026-05-10 09:30:24] 2026-05-10 07:25:58,504 | INFO     | all workflow threads have been joined
[2026-05-10 09:30:24] 2026-05-10 07:25:58,504 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-10 09:30:24] 2026-05-10 07:25:58,504 | INFO     | traces error code: 0
[2026-05-10 09:30:24] 2026-05-10 07:25:58,505 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-10 09:30:24] 2026-05-10 07:25:58,684 [wrapper] ==== pilot stdout END ====
[2026-05-10 09:30:24] 2026-05-10 07:25:58,688 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-10 09:30:24] 2026-05-10 07:25:58,691 [wrapper] pilotpid: 3234123
[2026-05-10 09:30:24] 2026-05-10 07:25:58,694 [wrapper] Pilot exit status: 0
[2026-05-10 09:30:24] 2026-05-10 07:25:58,705 [wrapper] pandaids: 7134476575
[2026-05-10 09:30:24] 2026-05-10 07:25:58,795 [wrapper] cleanup supervisor_pilot 3455277 3234124
[2026-05-10 09:30:24] 2026-05-10 07:25:58,798 [wrapper] Test setup, not cleaning
[2026-05-10 09:30:24] 2026-05-10 07:25:58,802 [wrapper] apfmon messages muted
[2026-05-10 09:30:24] 2026-05-10 07:25:58,805 [wrapper] ==== wrapper stdout END ====
[2026-05-10 09:30:24] 2026-05-10 07:25:58,808 [wrapper] ==== wrapper stderr END ====
[2026-05-10 09:30:24]  *** Error codes and diagnostics ***
[2026-05-10 09:30:24]     "exeErrorCode": 0,
[2026-05-10 09:30:24]     "pilotErrorCode": 0,
[2026-05-10 09:30:24]  *** Listing of results directory ***
[2026-05-10 09:30:24] total 407704
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc    683926 May  9 02:19 pilot3.tar.gz
[2026-05-10 09:30:24] -rwx------. 1 boinc boinc     36281 May  9 03:11 runpilot2-wrapper.sh
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc      5631 May  9 15:42 queuedata.json
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc       100 May 10 06:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-10 09:30:24] -rwxr-xr-x. 1 boinc boinc      7986 May 10 06:31 run_atlas
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc       105 May 10 06:31 job.xml
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc      6482 May 10 06:31 init_data.xml
[2026-05-10 09:30:24] -rw-r--r--. 2 boinc boinc 245736031 May 10 06:31 EVNT.50010994._000089.pool.root.1
[2026-05-10 09:30:24] -rw-r--r--. 2 boinc boinc    697420 May 10 06:31 input.tar.gz
[2026-05-10 09:30:24] -rw-r--r--. 2 boinc boinc     15667 May 10 06:31 start_atlas.sh
[2026-05-10 09:30:24] drwxrwx--x. 2 boinc boinc      4096 May 10 06:31 shared
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc         0 May 10 06:31 boinc_lockfile
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc      2541 May 10 06:31 pandaJob.out
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc    995477 May 10 06:31 agis_schedconf.cvmfs.json
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc   1502997 May 10 06:31 agis_ddmendpoints.agis.ALL.json
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc       452 May 10 06:31 workernode_map.json
[2026-05-10 09:30:24] drwx------. 5 boinc boinc      4096 May 10 06:31 pilot3
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc 165056858 May 10 09:24 HITS.50010997._025730.pool.root.1
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc       486 May 10 09:24 boinc_task_state.xml
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc      1032 May 10 09:24 memory_monitor_summary.json
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc    291415 May 10 09:24 log.50010997._025730.job.log.tgz.1
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc      6422 May 10 09:25 heartbeat_new.json
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc      6313 May 10 09:25 heartbeat.json
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc        95 May 10 09:25 pilot_heartbeat.json
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc      6444 May 10 09:25 pilotlog.txt
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc    987241 May 10 09:25 log.50010997._025730.job.log.1
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc       357 May 10 09:25 output.list
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc       410 May 10 09:25 runtime_log
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc   1300480 May 10 09:25 result.tar.gz
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc      8828 May 10 09:25 runtime_log.err
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc       666 May 10 09:25 89d15f0f2d64.diag
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc        26 May 10 09:30 wrapper_checkpoint.txt
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc      8192 May 10 09:30 boinc_mmap_file
[2026-05-10 09:30:24] -rw-r--r--. 1 boinc boinc     21139 May 10 09:30 stderr.txt
[2026-05-10 09:30:24] HITS file was successfully produced:
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc 165056858 May 10 09:24 shared/HITS.pool.root.1
[2026-05-10 09:30:24]  *** Contents of shared directory: ***
[2026-05-10 09:30:24] total 403152
[2026-05-10 09:30:24] -rw-r--r--. 2 boinc boinc 245736031 May 10 06:31 ATLAS.root_0
[2026-05-10 09:30:24] -rw-r--r--. 2 boinc boinc    697420 May 10 06:31 input.tar.gz
[2026-05-10 09:30:24] -rw-r--r--. 2 boinc boinc     15667 May 10 06:31 start_atlas.sh
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc 165056858 May 10 09:24 HITS.pool.root.1
[2026-05-10 09:30:24] -rw-------. 1 boinc boinc   1300480 May 10 09:25 result.tar.gz
09:30:26 (3226235): run_atlas exited; CPU time 40028.999582
09:30:26 (3226235): called boinc_finish(0)

</stderr_txt>
]]>

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