Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:31:30 (935924): wrapper (7.7.26015): starting
23:31:30 (935924): wrapper: running run_atlas (--nthreads 8)
[2026-05-08 23:31:30] Arguments: --nthreads 8
[2026-05-08 23:31:30] Threads: 8
[2026-05-08 23:31:30] Checking for CVMFS
[2026-05-08 23:31:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-08 23:31:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-08 23:31:31] Running cvmfs_config stat atlas.cern.ch
[2026-05-08 23:31:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-08 23:31:32] 2.13.3.0 12345 12342 110952 159386 2 54 19915368 32935937 13985 16776704 0 53301356 99.628 48969990 30457 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-08 23:31:32] CVMFS is ok
[2026-05-08 23:31:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-08 23:31:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-08 23:31:32] Further information can be found at the LHC@home message board.
[2026-05-08 23:31:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-08 23:31:32] Checking for apptainer binary...
[2026-05-08 23:31:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-08 23:31:32] Running /usr/bin/apptainer --version
[2026-05-08 23:31:33] apptainer version 1.4.5-3.el9
[2026-05-08 23:31:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-08 23:31:34] c-4-36.aglt2.org
[2026-05-08 23:31:34] apptainer works
[2026-05-08 23:31:34] Set ATHENA_PROC_NUMBER=8
[2026-05-08 23:31:34] Set ATHENA_CORE_NUMBER=8
[2026-05-08 23:31:34] Starting ATLAS job with PandaID=7122845817
[2026-05-08 23:31:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-09 05:56:46]  *** The last 200 lines of the pilot log: ***
[2026-05-09 05:56:46] 2026-05-09 09:55:52,634 | INFO     | maximum number of monitored processes: 6
[2026-05-09 05:56:46] 2026-05-09 09:55:55,139 | INFO     | monitor loop #1472: job 0:7122845817 is in state 'finished'
[2026-05-09 05:56:46] 2026-05-09 09:55:55,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,485 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-09 05:56:46] 2026-05-09 09:55:55,587 | INFO     | job 7122845817 has state=finished
[2026-05-09 05:56:46] 2026-05-09 09:55:55,587 | INFO     | preparing for final server update for job 7122845817 in state='finished'
[2026-05-09 05:56:46] 2026-05-09 09:55:55,587 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7122845817/jobReport.json
[2026-05-09 05:56:46] 2026-05-09 09:55:55,591 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-05-09 05:56:46] 2026-05-09 09:55:55,591 | INFO     | this job has now completed (state=finished)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,591 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,592 | INFO     | log transfer has been attempted: DONE
[2026-05-09 05:56:46] 2026-05-09 09:55:55,592 | INFO     | job 7122845817 has finished - writing final server update
[2026-05-09 05:56:46] 2026-05-09 09:55:55,592 | INFO     | total number of processed events: 400 (read)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,598 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7122845817/memory_monitor_summary.json (trf name=prmon)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,599 | INFO     | extracted standard info from prmon json
[2026-05-09 05:56:46] 2026-05-09 09:55:55,599 | INFO     | extracted standard memory fields from prmon json
[2026-05-09 05:56:46] 2026-05-09 09:55:55,600 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-09 05:56:46] 2026-05-09 09:55:55,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-09 05:56:46] 2026-05-09 09:55:55,607 | INFO     | fitting pss+swap vs Time
[2026-05-09 05:56:46] 2026-05-09 09:55:55,608 | INFO     | sum of square deviations: 16222031614.505419
[2026-05-09 05:56:46] 2026-05-09 09:55:55,612 | INFO     | sum of deviations: 38467686187.40111
[2026-05-09 05:56:46] 2026-05-09 09:55:55,612 | INFO     | mean x (centered): 0.0
[2026-05-09 05:56:46] 2026-05-09 09:55:55,612 | INFO     | mean y: 2533964.721925134
[2026-05-09 05:56:46] 2026-05-09 09:55:55,612 | INFO     | intersect: 2533964.721925134
[2026-05-09 05:56:46] 2026-05-09 09:55:55,613 | INFO     | chi2: 3.2052626080139373
[2026-05-09 05:56:46] 2026-05-09 09:55:55,613 | INFO     | sum of square deviations: 15580163535.121988
[2026-05-09 05:56:46] 2026-05-09 09:55:55,617 | INFO     | sum of deviations: 61631186925.39836
[2026-05-09 05:56:46] 2026-05-09 09:55:55,618 | INFO     | mean x (centered): 0.0
[2026-05-09 05:56:46] 2026-05-09 09:55:55,618 | INFO     | mean y: 2539406.485094851
[2026-05-09 05:56:46] 2026-05-09 09:55:55,618 | INFO     | intersect: 2539406.485094851
[2026-05-09 05:56:46] 2026-05-09 09:55:55,619 | INFO     | chi2: 2.5291664128583604
[2026-05-09 05:56:46] 2026-05-09 09:55:55,619 | INFO     | current chi2=2.5291664128583604 (change=21.093316768029293 %)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,619 | INFO     | right removable region: 368
[2026-05-09 05:56:46] 2026-05-09 09:55:55,619 | INFO     | sum of square deviations: 15580024455.122002
[2026-05-09 05:56:46] 2026-05-09 09:55:55,623 | INFO     | sum of deviations: -45091447038.48779
[2026-05-09 05:56:46] 2026-05-09 09:55:55,624 | INFO     | mean x (centered): 0.0
[2026-05-09 05:56:46] 2026-05-09 09:55:55,624 | INFO     | mean y: 2553737.861788618
[2026-05-09 05:56:46] 2026-05-09 09:55:55,624 | INFO     | intersect: 2553737.861788618
[2026-05-09 05:56:46] 2026-05-09 09:55:55,625 | INFO     | chi2: 1.031150245772639
[2026-05-09 05:56:46] 2026-05-09 09:55:55,625 | INFO     | current chi2=1.031150245772639 (change=67.82946136162099 %)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,625 | INFO     | sum of square deviations: 14955225668.681452
[2026-05-09 05:56:46] 2026-05-09 09:55:55,629 | INFO     | sum of deviations: -51325034214.83519
[2026-05-09 05:56:46] 2026-05-09 09:55:55,629 | INFO     | mean x (centered): 0.0
[2026-05-09 05:56:46] 2026-05-09 09:55:55,629 | INFO     | mean y: 2555245.85989011
[2026-05-09 05:56:46] 2026-05-09 09:55:55,630 | INFO     | intersect: 2555245.85989011
[2026-05-09 05:56:46] 2026-05-09 09:55:55,630 | INFO     | chi2: 1.00235534768091
[2026-05-09 05:56:46] 2026-05-09 09:55:55,630 | INFO     | current chi2=1.00235534768091 (change=2.79250266484231 %)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,631 | INFO     | left removable region: 10
[2026-05-09 05:56:46] 2026-05-09 09:55:55,631 | INFO     | sum of square deviations: 14227906836.82954
[2026-05-09 05:56:46] 2026-05-09 09:55:55,634 | INFO     | sum of deviations: -27564616902.497185
[2026-05-09 05:56:46] 2026-05-09 09:55:55,635 | INFO     | mean x (centered): 0.0
[2026-05-09 05:56:46] 2026-05-09 09:55:55,635 | INFO     | mean y: 2561142.776536313
[2026-05-09 05:56:46] 2026-05-09 09:55:55,635 | INFO     | intersect: 2561142.776536313
[2026-05-09 05:56:46] 2026-05-09 09:55:55,636 | INFO     | chi2: 0.31059710167765625
[2026-05-09 05:56:46] 2026-05-09 09:55:55,636 | INFO     | current memory leak: -1.94 B/s (using 358 data points, chi2=0.31)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,636 | INFO     | could have reported an average CPU frequency of 2600 MHz (16 samples)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,637 | INFO     | ..............................
[2026-05-09 05:56:46] 2026-05-09 09:55:55,637 | INFO     | . Timing measurements:
[2026-05-09 05:56:46] 2026-05-09 09:55:55,637 | INFO     | . get job = 1 s
[2026-05-09 05:56:46] 2026-05-09 09:55:55,637 | INFO     | . initial setup = 55 s
[2026-05-09 05:56:46] 2026-05-09 09:55:55,637 | INFO     | . payload setup = 89 s
[2026-05-09 05:56:46] 2026-05-09 09:55:55,637 | INFO     | . stage-in = 1 s
[2026-05-09 05:56:46] 2026-05-09 09:55:55,637 | INFO     | . payload execution = 22805 s
[2026-05-09 05:56:46] 2026-05-09 09:55:55,637 | INFO     | . stage-out = 4 s
[2026-05-09 05:56:46] 2026-05-09 09:55:55,638 | INFO     | . log creation = 0 s
[2026-05-09 05:56:46] 2026-05-09 09:55:55,638 | INFO     | ..............................
[2026-05-09 05:56:46] 2026-05-09 09:55:55,735 | INFO     | 
[2026-05-09 05:56:46] 2026-05-09 09:55:55,736 | INFO     | job summary report
[2026-05-09 05:56:46] 2026-05-09 09:55:55,736 | INFO     | --------------------------------------------------
[2026-05-09 05:56:46] 2026-05-09 09:55:55,736 | INFO     | PanDA job id: 7122845817
[2026-05-09 05:56:46] 2026-05-09 09:55:55,736 | INFO     | task id: 49263200
[2026-05-09 05:56:46] 2026-05-09 09:55:55,736 | INFO     | errors: (none)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,736 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-09 05:56:46] 2026-05-09 09:55:55,736 | INFO     | pilot state: finished 
[2026-05-09 05:56:46] 2026-05-09 09:55:55,737 | INFO     | transexitcode: 0
[2026-05-09 05:56:46] 2026-05-09 09:55:55,737 | INFO     | exeerrorcode: 0
[2026-05-09 05:56:46] 2026-05-09 09:55:55,737 | INFO     | exeerrordiag: 
[2026-05-09 05:56:46] 2026-05-09 09:55:55,737 | INFO     | exitcode: 0
[2026-05-09 05:56:46] 2026-05-09 09:55:55,737 | INFO     | exitmsg: OK
[2026-05-09 05:56:46] 2026-05-09 09:55:55,737 | INFO     | cpuconsumptiontime: 48797 s
[2026-05-09 05:56:46] 2026-05-09 09:55:55,737 | INFO     | nevents: 400
[2026-05-09 05:56:46] 2026-05-09 09:55:55,737 | INFO     | neventsw: 0
[2026-05-09 05:56:46] 2026-05-09 09:55:55,737 | INFO     | pid: 949024
[2026-05-09 05:56:46] 2026-05-09 09:55:55,737 | INFO     | pgrp: 949024
[2026-05-09 05:56:46] 2026-05-09 09:55:55,738 | INFO     | corecount: 8
[2026-05-09 05:56:46] 2026-05-09 09:55:55,738 | INFO     | event service: False
[2026-05-09 05:56:46] 2026-05-09 09:55:55,738 | INFO     | sizes: {0: 2265560, 1: 2266161, 3: 2266245, 4: 2266301, 6: 2266674, 7: 2266674, 8: 2268258, 9: 2268286, 22898: 2303116, 22902: 2312114, 22906: 2312644}
[2026-05-09 05:56:46] 2026-05-09 09:55:55,738 | INFO     | --------------------------------------------------
[2026-05-09 05:56:46] 2026-05-09 09:55:55,738 | INFO     | 
[2026-05-09 05:56:46] 2026-05-09 09:55:55,738 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-05-09 05:56:46] 2026-05-09 09:55:55,757 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,757 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,758 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,758 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,758 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,759 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,760 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-09 05:56:46] 2026-05-09 09:55:55,760 | INFO     | job 7122845817 has completed (purged errors)
[2026-05-09 05:56:46] 2026-05-09 09:55:55,760 | INFO     | overall cleanup function is called
[2026-05-09 05:56:46] 2026-05-09 09:55:56,774 | INFO     | --- collectZombieJob: --- 10, [949024]
[2026-05-09 05:56:46] 2026-05-09 09:55:56,774 | INFO     | zombie collector waiting for pid 949024
[2026-05-09 05:56:46] 2026-05-09 09:55:56,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-09 05:56:46] 2026-05-09 09:55:56,777 | INFO     | collected zombie processes
[2026-05-09 05:56:46] 2026-05-09 09:55:56,777 | INFO     | will attempt to kill all subprocesses of pid=949024
[2026-05-09 05:56:46] 2026-05-09 09:55:57,094 | INFO     | process IDs to be killed: [949024] (in reverse order)
[2026-05-09 05:56:46] 2026-05-09 09:55:57,201 | WARNING  | found no corresponding commands to process id(s)
[2026-05-09 05:56:46] 2026-05-09 09:55:57,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-09 05:56:46] 2026-05-09 09:55:57,214 | INFO     | did not find any defunct processes belonging to 949024
[2026-05-09 05:56:46] 2026-05-09 09:55:57,227 | INFO     | did not find any defunct processes belonging to 949024
[2026-05-09 05:56:46] 2026-05-09 09:55:57,227 | INFO     | Ready for new job
[2026-05-09 05:56:46] 2026-05-09 09:55:57,229 | INFO     | ***************************************
[2026-05-09 05:56:46] 2026-05-09 09:55:57,229 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-09 05:56:46] 2026-05-09 09:55:57,229 | INFO     | ***************************************
[2026-05-09 05:56:46] 2026-05-09 09:55:57,229 | INFO     | 
[2026-05-09 05:56:46] 2026-05-09 09:55:57,231 | INFO     | architecture information:
[2026-05-09 05:56:46] 2026-05-09 09:55:57,232 | INFO     | executing command: cat /etc/os-release
[2026-05-09 05:56:46] 2026-05-09 09:55:57,246 | INFO     | cat /etc/os-release:
[2026-05-09 05:56:46] NAME="CentOS Linux"
[2026-05-09 05:56:46] VERSION="7 (Core)"
[2026-05-09 05:56:46] ID="centos"
[2026-05-09 05:56:46] ID_LIKE="rhel fedora"
[2026-05-09 05:56:46] VERSION_ID="7"
[2026-05-09 05:56:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-09 05:56:46] ANSI_COLOR="0;31"
[2026-05-09 05:56:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-09 05:56:46] HOME_URL="https://www.centos.org/"
[2026-05-09 05:56:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-09 05:56:46] 
[2026-05-09 05:56:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-09 05:56:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-09 05:56:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-09 05:56:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-09 05:56:46] 
[2026-05-09 05:56:46] 2026-05-09 09:55:57,246 | INFO     | ***************************************
[2026-05-09 05:56:46] 2026-05-09 09:55:57,750 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-05-09 05:56:46] 2026-05-09 09:55:57,839 | INFO     | sufficient remaining disk space (76231475200 B)
[2026-05-09 05:56:46] 2026-05-09 09:55:57,839 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-09 05:56:46] 2026-05-09 09:55:57,840 | INFO     | current server update state: UPDATING_FINAL
[2026-05-09 05:56:46] 2026-05-09 09:55:57,840 | INFO     | update_server=False
[2026-05-09 05:56:46] 2026-05-09 09:55:57,840 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-09 05:56:46] 2026-05-09 09:55:57,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-09 05:56:46] 2026-05-09 09:55:57,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-09 05:56:46] 2026-05-09 09:55:58,044 | INFO     | all payload control threads have been joined
[2026-05-09 05:56:46] 2026-05-09 09:55:58,550 | INFO     | all data control threads have been joined
[2026-05-09 05:56:46] 2026-05-09 09:55:58,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-09 05:56:46] 2026-05-09 09:55:58,654 | INFO     | aborting loop
[2026-05-09 05:56:46] 2026-05-09 09:55:58,718 | INFO     | all job control threads have been joined
[2026-05-09 05:56:46] 2026-05-09 09:55:58,846 | INFO     | [job] retrieve thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:55:58,860 | INFO     | [payload] execute_payloads thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:55:58,951 | INFO     | [data] copytool_in thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:55:59,052 | INFO     | [payload] control thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:55:59,420 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:55:59,556 | INFO     | [data] control thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:55:59,660 | INFO     | [job] job monitor thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:55:59,724 | INFO     | [job] control thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:55:59,757 | INFO     | [payload] validate_post thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:55:59,847 | INFO     | [data] copytool_out thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:56:00,116 | INFO     | [payload] validate_pre thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:56:00,166 | INFO     | [job] create_data_payload thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:56:00,344 | INFO     | [job] validate thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:56:00,418 | INFO     | [payload] failed_post thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:56:00,753 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-09 05:56:46] 2026-05-09 09:56:01,758 | INFO     | [job] queue monitor thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:56:01,848 | INFO     | [data] queue_monitor thread has finished
[2026-05-09 05:56:46] 2026-05-09 09:56:27,980 | INFO     | PID=940765 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-09 05:56:46] 2026-05-09 09:56:27,980 | INFO     | .. there are 19 such processes running
[2026-05-09 05:56:46] 2026-05-09 09:56:27,980 | INFO     | found 0 job(s) in 20 queues
[2026-05-09 05:56:46] 2026-05-09 09:56:27,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-09 05:56:46] 2026-05-09 09:56:27,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-09 05:56:46] 2026-05-09 09:56:39,193 | INFO     | [monitor] cgroup control has ended
[2026-05-09 05:56:46] 2026-05-09 09:56:41,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562451846976)>', '<ExcThread(monitor, started 140561923172096)>']
[2026-05-09 05:56:46] 2026-05-09 09:56:41,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-09 05:56:46] 2026-05-09 09:56:41,060 | INFO     | [monitor] control thread has ended
[2026-05-09 05:56:46] 2026-05-09 09:56:46,079 | INFO     | all workflow threads have been joined
[2026-05-09 05:56:46] 2026-05-09 09:56:46,079 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-09 05:56:46] 2026-05-09 09:56:46,079 | INFO     | traces error code: 0
[2026-05-09 05:56:46] 2026-05-09 09:56:46,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-09 05:56:46] 2026-05-09 09:56:46,229 [wrapper] ==== pilot stdout END ====
[2026-05-09 05:56:46] 2026-05-09 09:56:46,252 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-09 05:56:46] 2026-05-09 09:56:46,298 [wrapper] pilotpid: 940765
[2026-05-09 05:56:46] 2026-05-09 09:56:46,322 [wrapper] Pilot exit status: 0
[2026-05-09 05:56:46] 2026-05-09 09:56:46,408 [wrapper] pandaids: 7122845817
[2026-05-09 05:56:46] 2026-05-09 09:56:46,563 [wrapper] cleanup supervisor_pilot 2006266 940766
[2026-05-09 05:56:46] 2026-05-09 09:56:46,566 [wrapper] Test setup, not cleaning
[2026-05-09 05:56:46] 2026-05-09 09:56:46,568 [wrapper] apfmon messages muted
[2026-05-09 05:56:46] 2026-05-09 09:56:46,571 [wrapper] ==== wrapper stdout END ====
[2026-05-09 05:56:46] 2026-05-09 09:56:46,574 [wrapper] ==== wrapper stderr END ====
[2026-05-09 05:56:46]  *** Error codes and diagnostics ***
[2026-05-09 05:56:46]     "exeErrorCode": 0,
[2026-05-09 05:56:46]     "pilotErrorCode": 0,
[2026-05-09 05:56:46]  *** Listing of results directory ***
[2026-05-09 05:56:46] total 419624
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas      5631 May  1 17:37 queuedata.json
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas    683926 May  1 17:37 pilot3.tar.gz
[2026-05-09 05:56:46] -rwx------. 1 boincer umatlas     36322 May  1 17:38 runpilot2-wrapper.sh
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas       100 May  8 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-09 05:56:46] -rwxr-xr-x. 1 boincer umatlas      7986 May  8 23:31 run_atlas
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas       105 May  8 23:31 job.xml
[2026-05-09 05:56:46] -rw-r--r--. 2 boincer umatlas 228170260 May  8 23:31 EVNT.49263198._001722.pool.root.1
[2026-05-09 05:56:46] -rw-r--r--. 2 boincer umatlas     15667 May  8 23:31 start_atlas.sh
[2026-05-09 05:56:46] drwxrwx--x. 2 boincer umatlas      4096 May  8 23:31 shared
[2026-05-09 05:56:46] -rw-r--r--. 2 boincer umatlas    697433 May  8 23:31 input.tar.gz
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas         0 May  8 23:31 boinc_lockfile
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas      2576 May  8 23:31 pandaJob.out
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas        57 May  8 23:31 setup.sh.local
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas    994235 May  8 23:33 agis_schedconf.cvmfs.json
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas       432 May  8 23:33 workernode_map.json
[2026-05-09 05:56:46] drwx------. 5 boincer umatlas      4096 May  8 23:34 pilot3
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas 192619160 May  9 05:55 HITS.49263200._084063.pool.root.1
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas       488 May  9 05:55 boinc_task_state.xml
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas        95 May  9 05:55 pilot_heartbeat.json
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas      6573 May  9 05:55 init_data.xml
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas      1044 May  9 05:55 memory_monitor_summary.json
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas   1502997 May  9 05:55 agis_ddmendpoints.agis.ALL.json
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas    481583 May  9 05:55 log.49263200._084063.job.log.tgz.1
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas      6404 May  9 05:55 heartbeat_new.json
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas      6295 May  9 05:55 heartbeat.json
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas      8192 May  9 05:56 boinc_mmap_file
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas        28 May  9 05:56 wrapper_checkpoint.txt
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas      4822 May  9 05:56 pilotlog.txt
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas   1910338 May  9 05:56 log.49263200._084063.job.log.1
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas       357 May  9 05:56 output.list
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas       410 May  9 05:56 runtime_log
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas   2406400 May  9 05:56 result.tar.gz
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas      8955 May  9 05:56 runtime_log.err
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas       655 May  9 05:56 1d691be5345b.diag
[2026-05-09 05:56:46] -rw-r--r--. 1 boincer umatlas     21058 May  9 05:56 stderr.txt
[2026-05-09 05:56:46] HITS file was successfully produced:
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas 192619160 May  9 05:55 shared/HITS.pool.root.1
[2026-05-09 05:56:46]  *** Contents of shared directory: ***
[2026-05-09 05:56:46] total 413988
[2026-05-09 05:56:46] -rw-r--r--. 2 boincer umatlas 228170260 May  8 23:31 ATLAS.root_0
[2026-05-09 05:56:46] -rw-r--r--. 2 boincer umatlas     15667 May  8 23:31 start_atlas.sh
[2026-05-09 05:56:46] -rw-r--r--. 2 boincer umatlas    697433 May  8 23:31 input.tar.gz
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas 192619160 May  9 05:55 HITS.pool.root.1
[2026-05-09 05:56:46] -rw-------. 1 boincer umatlas   2406400 May  9 05:56 result.tar.gz
05:56:48 (935924): run_atlas exited; CPU time 49611.819203
05:56:48 (935924): called boinc_finish(0)

</stderr_txt>
]]>

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