Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:23:17 (2520932): wrapper (7.7.26015): starting
21:23:17 (2520932): wrapper: running run_atlas (--nthreads 4)
[2026-05-09 21:23:17] Arguments: --nthreads 4
[2026-05-09 21:23:17] Threads: 4
[2026-05-09 21:23:17] Checking for CVMFS
[2026-05-09 21:23:17] No cvmfs_config command found, will try listing directly
[2026-05-09 21:23:17] CVMFS is ok
[2026-05-09 21:23:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-09 21:23:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-09 21:23:17] Further information can be found at the LHC@home message board.
[2026-05-09 21:23:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-09 21:23:17] Checking for apptainer binary...
[2026-05-09 21:23:17] which: no apptainer in ((null))
[2026-05-09 21:23:17] apptainer is not installed, using version from CVMFS
[2026-05-09 21:23:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-09 21:23:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-05-09 21:23:17] apptainer works
[2026-05-09 21:23:17] Set ATHENA_PROC_NUMBER=4
[2026-05-09 21:23:17] Set ATHENA_CORE_NUMBER=4
[2026-05-09 21:23:17] Starting ATLAS job with PandaID=7134212298
[2026-05-09 21:23:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-10 00:21:59]  *** The last 200 lines of the pilot log: ***
[2026-05-10 00:21:59] 2026-05-09 22:21:21,200 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,200 | INFO     | log transfer has been attempted: DONE
[2026-05-10 00:21:59] 2026-05-09 22:21:21,200 | INFO     | job 7134212298 has finished - writing final server update
[2026-05-10 00:21:59] 2026-05-09 22:21:21,200 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3029650/.job.ad'
[2026-05-10 00:21:59] 2026-05-09 22:21:21,200 | INFO     | total number of processed events: 400 (read)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,214 | INFO     | using path: /var/lib/boinc/var/slot28/slots/5/PanDA_Pilot-7134212298/memory_monitor_summary.json (trf name=prmon)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,215 | INFO     | extracted standard info from prmon json
[2026-05-10 00:21:59] 2026-05-09 22:21:21,215 | INFO     | extracted standard memory fields from prmon json
[2026-05-10 00:21:59] 2026-05-09 22:21:21,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-10 00:21:59] 2026-05-09 22:21:21,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-10 00:21:59] 2026-05-09 22:21:21,220 | INFO     | fitting pss+swap vs Time
[2026-05-10 00:21:59] 2026-05-09 22:21:21,220 | INFO     | sum of square deviations: 1661798600.0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,221 | INFO     | sum of deviations: -54668583994.99999
[2026-05-10 00:21:59] 2026-05-09 22:21:21,221 | INFO     | mean x (centered): 0.0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,222 | INFO     | mean y: 2399976.4285714286
[2026-05-10 00:21:59] 2026-05-09 22:21:21,222 | INFO     | intersect: 2399976.4285714286
[2026-05-10 00:21:59] 2026-05-09 22:21:21,222 | INFO     | chi2: 2.3165417011089846
[2026-05-10 00:21:59] 2026-05-09 22:21:21,222 | INFO     | sum of square deviations: 1523386702.5
[2026-05-10 00:21:59] 2026-05-09 22:21:21,224 | INFO     | sum of deviations: -42549937956.50001
[2026-05-10 00:21:59] 2026-05-09 22:21:21,224 | INFO     | mean x (centered): 0.0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,224 | INFO     | mean y: 2413074.5588235296
[2026-05-10 00:21:59] 2026-05-09 22:21:21,224 | INFO     | intersect: 2413074.5588235296
[2026-05-10 00:21:59] 2026-05-09 22:21:21,224 | INFO     | chi2: 1.6581997514892293
[2026-05-10 00:21:59] 2026-05-09 22:21:21,224 | INFO     | current chi2=1.6581997514892293 (change=28.41917109908236 %)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,225 | INFO     | sum of square deviations: 1392881930.0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,226 | INFO     | sum of deviations: -40574239670.00001
[2026-05-10 00:21:59] 2026-05-09 22:21:21,226 | INFO     | mean x (centered): 0.0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,226 | INFO     | mean y: 2415384.175757576
[2026-05-10 00:21:59] 2026-05-09 22:21:21,226 | INFO     | intersect: 2415384.175757576
[2026-05-10 00:21:59] 2026-05-09 22:21:21,226 | INFO     | chi2: 1.6495969812617528
[2026-05-10 00:21:59] 2026-05-09 22:21:21,226 | INFO     | current chi2=1.6495969812617528 (change=0.5188018041704756 %)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,227 | INFO     | right removable region: 164
[2026-05-10 00:21:59] 2026-05-09 22:21:21,227 | INFO     | sum of square deviations: 1523386702.5
[2026-05-10 00:21:59] 2026-05-09 22:21:21,228 | INFO     | sum of deviations: -73969064819.99998
[2026-05-10 00:21:59] 2026-05-09 22:21:21,228 | INFO     | mean x (centered): 0.0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,228 | INFO     | mean y: 2420840.3529411764
[2026-05-10 00:21:59] 2026-05-09 22:21:21,228 | INFO     | intersect: 2420840.3529411764
[2026-05-10 00:21:59] 2026-05-09 22:21:21,229 | INFO     | chi2: 1.0276516775217122
[2026-05-10 00:21:59] 2026-05-09 22:21:21,229 | INFO     | current chi2=1.0276516775217122 (change=55.638541838907955 %)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,229 | INFO     | sum of square deviations: 1392881930.0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,230 | INFO     | sum of deviations: -68495868978.0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,230 | INFO     | mean x (centered): 0.0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,230 | INFO     | mean y: 2414411.56969697
[2026-05-10 00:21:59] 2026-05-09 22:21:21,231 | INFO     | intersect: 2414411.56969697
[2026-05-10 00:21:59] 2026-05-09 22:21:21,231 | INFO     | chi2: 1.024657045392525
[2026-05-10 00:21:59] 2026-05-09 22:21:21,231 | INFO     | current chi2=1.024657045392525 (change=0.29140536571779085 %)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,231 | INFO     | left removable region: 10
[2026-05-10 00:21:59] 2026-05-09 22:21:21,231 | INFO     | sum of square deviations: 1132458442.5
[2026-05-10 00:21:59] 2026-05-09 22:21:21,232 | INFO     | sum of deviations: -53996268621.5
[2026-05-10 00:21:59] 2026-05-09 22:21:21,233 | INFO     | mean x (centered): 0.0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,233 | INFO     | mean y: 2432368.538961039
[2026-05-10 00:21:59] 2026-05-09 22:21:21,233 | INFO     | intersect: 2432368.538961039
[2026-05-10 00:21:59] 2026-05-09 22:21:21,233 | INFO     | chi2: 0.3243035179587034
[2026-05-10 00:21:59] 2026-05-09 22:21:21,233 | INFO     | current memory leak: -47.68 B/s (using 154 data points, chi2=0.32)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,234 | INFO     | could have reported an average CPU frequency of 2564 MHz (9 samples)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,234 | INFO     | ..............................
[2026-05-10 00:21:59] 2026-05-09 22:21:21,234 | INFO     | . Timing measurements:
[2026-05-10 00:21:59] 2026-05-09 22:21:21,235 | INFO     | . get job = 0 s
[2026-05-10 00:21:59] 2026-05-09 22:21:21,235 | INFO     | . initial setup = 6 s
[2026-05-10 00:21:59] 2026-05-09 22:21:21,235 | INFO     | . payload setup = 11 s
[2026-05-10 00:21:59] 2026-05-09 22:21:21,235 | INFO     | . stage-in = 0 s
[2026-05-10 00:21:59] 2026-05-09 22:21:21,235 | INFO     | . payload execution = 10634 s
[2026-05-10 00:21:59] 2026-05-09 22:21:21,235 | INFO     | . stage-out = 0 s
[2026-05-10 00:21:59] 2026-05-09 22:21:21,235 | INFO     | . log creation = 0 s
[2026-05-10 00:21:59] 2026-05-09 22:21:21,235 | INFO     | ..............................
[2026-05-10 00:21:59] 2026-05-09 22:21:21,341 | INFO     | 
[2026-05-10 00:21:59] 2026-05-09 22:21:21,342 | INFO     | job summary report
[2026-05-10 00:21:59] 2026-05-09 22:21:21,342 | INFO     | --------------------------------------------------
[2026-05-10 00:21:59] 2026-05-09 22:21:21,342 | INFO     | PanDA job id: 7134212298
[2026-05-10 00:21:59] 2026-05-09 22:21:21,342 | INFO     | task id: 50087071
[2026-05-10 00:21:59] 2026-05-09 22:21:21,342 | INFO     | errors: (none)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,342 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-10 00:21:59] 2026-05-09 22:21:21,342 | INFO     | pilot state: finished 
[2026-05-10 00:21:59] 2026-05-09 22:21:21,342 | INFO     | transexitcode: 0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,342 | INFO     | exeerrorcode: 0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,342 | INFO     | exeerrordiag: 
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | exitcode: 0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | exitmsg: OK
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | cpuconsumptiontime: 40659 s
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | nevents: 400
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | neventsw: 0
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | pid: 2529925
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | pgrp: 2529925
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | corecount: 4
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | event service: False
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | sizes: {0: 2266358, 1: 2267932, 11: 2267960, 10649: 2296878, 10651: 2305898, 10654: 2306340}
[2026-05-10 00:21:59] 2026-05-09 22:21:21,343 | INFO     | --------------------------------------------------
[2026-05-10 00:21:59] 2026-05-09 22:21:21,344 | INFO     | 
[2026-05-10 00:21:59] 2026-05-09 22:21:21,344 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/5
[2026-05-10 00:21:59] 2026-05-09 22:21:21,367 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,369 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,369 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-10 00:21:59] 2026-05-09 22:21:21,369 | INFO     | job 7134212298 has completed (purged errors)
[2026-05-10 00:21:59] 2026-05-09 22:21:21,369 | INFO     | overall cleanup function is called
[2026-05-10 00:21:59] 2026-05-09 22:21:22,373 | INFO     | --- collectZombieJob: --- 10, [2529925]
[2026-05-10 00:21:59] 2026-05-09 22:21:22,374 | INFO     | zombie collector waiting for pid 2529925
[2026-05-10 00:21:59] 2026-05-09 22:21:22,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-10 00:21:59] 2026-05-09 22:21:22,374 | INFO     | collected zombie processes
[2026-05-10 00:21:59] 2026-05-09 22:21:22,374 | INFO     | will attempt to kill all subprocesses of pid=2529925
[2026-05-10 00:21:59] 2026-05-09 22:21:22,708 | INFO     | process IDs to be killed: [2529925] (in reverse order)
[2026-05-10 00:21:59] 2026-05-09 22:21:22,836 | WARNING  | found no corresponding commands to process id(s)
[2026-05-10 00:21:59] 2026-05-09 22:21:22,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-10 00:21:59] 2026-05-09 22:21:22,848 | INFO     | did not find any defunct processes belonging to 2529925
[2026-05-10 00:21:59] 2026-05-09 22:21:22,860 | INFO     | did not find any defunct processes belonging to 2529925
[2026-05-10 00:21:59] 2026-05-09 22:21:22,861 | INFO     | Ready for new job
[2026-05-10 00:21:59] 2026-05-09 22:21:22,863 | INFO     | ***************************************
[2026-05-10 00:21:59] 2026-05-09 22:21:22,863 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-10 00:21:59] 2026-05-09 22:21:22,863 | INFO     | ***************************************
[2026-05-10 00:21:59] 2026-05-09 22:21:22,863 | INFO     | 
[2026-05-10 00:21:59] 2026-05-09 22:21:22,867 | INFO     | architecture information:
[2026-05-10 00:21:59] 2026-05-09 22:21:22,868 | INFO     | executing command: cat /etc/os-release
[2026-05-10 00:21:59] 2026-05-09 22:21:22,884 | INFO     | cat /etc/os-release:
[2026-05-10 00:21:59] NAME="CentOS Linux"
[2026-05-10 00:21:59] VERSION="7 (Core)"
[2026-05-10 00:21:59] ID="centos"
[2026-05-10 00:21:59] ID_LIKE="rhel fedora"
[2026-05-10 00:21:59] VERSION_ID="7"
[2026-05-10 00:21:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-10 00:21:59] ANSI_COLOR="0;31"
[2026-05-10 00:21:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-10 00:21:59] HOME_URL="https://www.centos.org/"
[2026-05-10 00:21:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-10 00:21:59] 
[2026-05-10 00:21:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-10 00:21:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-10 00:21:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-10 00:21:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-10 00:21:59] 
[2026-05-10 00:21:59] 2026-05-09 22:21:22,884 | INFO     | ***************************************
[2026-05-10 00:21:59] 2026-05-09 22:21:23,387 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/5
[2026-05-10 00:21:59] 2026-05-09 22:21:23,408 | INFO     | sufficient remaining disk space (25859981312 B)
[2026-05-10 00:21:59] 2026-05-09 22:21:23,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-10 00:21:59] 2026-05-09 22:21:23,409 | INFO     | current server update state: UPDATING_FINAL
[2026-05-10 00:21:59] 2026-05-09 22:21:23,409 | INFO     | update_server=False
[2026-05-10 00:21:59] 2026-05-09 22:21:23,409 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-10 00:21:59] 2026-05-09 22:21:23,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-10 00:21:59] 2026-05-09 22:21:23,640 | INFO     | all data control threads have been joined
[2026-05-10 00:21:59] 2026-05-09 22:21:23,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-10 00:21:59] 2026-05-09 22:21:24,155 | INFO     | all payload control threads have been joined
[2026-05-10 00:21:59] 2026-05-09 22:21:24,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-10 00:21:59] 2026-05-09 22:21:24,222 | INFO     | aborting loop
[2026-05-10 00:21:59] 2026-05-09 22:21:24,414 | INFO     | [job] retrieve thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:24,420 | INFO     | [data] copytool_in thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:24,433 | INFO     | [payload] execute_payloads thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:24,631 | INFO     | [job] validate thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:24,645 | INFO     | [data] control thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:24,721 | INFO     | [payload] failed_post thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:25,061 | INFO     | all job control threads have been joined
[2026-05-10 00:21:59] 2026-05-09 22:21:25,141 | INFO     | [payload] validate_post thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:25,160 | INFO     | [payload] control thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:25,227 | INFO     | [job] job monitor thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:25,365 | INFO     | [job] create_data_payload thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:25,411 | INFO     | [payload] validate_pre thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:25,795 | INFO     | [data] copytool_out thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:26,066 | INFO     | [job] control thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:26,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-10 00:21:59] 2026-05-09 22:21:27,352 | INFO     | [job] queue monitor thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:27,416 | INFO     | [data] queue_monitor thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:34,084 | INFO     | job.realtimelogging is not enabled
[2026-05-10 00:21:59] 2026-05-09 22:21:35,090 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-10 00:21:59] 2026-05-09 22:21:52,779 | INFO     | [monitor] cgroup control has ended
[2026-05-10 00:21:59] 2026-05-09 22:21:53,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22875559515968)>', '<ExcThread(monitor, started 22875251644160)>']
[2026-05-10 00:21:59] 2026-05-09 22:21:54,852 | INFO     | PID=2525039 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-10 00:21:59] 2026-05-09 22:21:54,853 | INFO     | .. there are 11 such processes running
[2026-05-10 00:21:59] 2026-05-09 22:21:54,855 | INFO     | found 0 job(s) in 20 queues
[2026-05-10 00:21:59] 2026-05-09 22:21:54,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-10 00:21:59] 2026-05-09 22:21:54,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-10 00:21:59] 2026-05-09 22:21:54,855 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-10 00:21:59] 2026-05-09 22:21:54,855 | INFO     | [monitor] control thread has ended
[2026-05-10 00:21:59] 2026-05-09 22:21:58,967 | INFO     | all workflow threads have been joined
[2026-05-10 00:21:59] 2026-05-09 22:21:58,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-10 00:21:59] 2026-05-09 22:21:58,968 | INFO     | traces error code: 0
[2026-05-10 00:21:59] 2026-05-09 22:21:58,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-10 00:21:59] 2026-05-09 22:21:59,134 [wrapper] ==== pilot stdout END ====
[2026-05-10 00:21:59] 2026-05-09 22:21:59,136 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-10 00:21:59] 2026-05-09 22:21:59,139 [wrapper] pilotpid: 2525039
[2026-05-10 00:21:59] 2026-05-09 22:21:59,143 [wrapper] Pilot exit status: 0
[2026-05-10 00:21:59] 2026-05-09 22:21:59,158 [wrapper] pandaids: 7134212298
[2026-05-10 00:21:59] 2026-05-09 22:21:59,234 [wrapper] cleanup supervisor_pilot 2743192 2525040
[2026-05-10 00:21:59] 2026-05-09 22:21:59,238 [wrapper] Test setup, not cleaning
[2026-05-10 00:21:59] 2026-05-09 22:21:59,242 [wrapper] apfmon messages muted
[2026-05-10 00:21:59] 2026-05-09 22:21:59,245 [wrapper] ==== wrapper stdout END ====
[2026-05-10 00:21:59] 2026-05-09 22:21:59,249 [wrapper] ==== wrapper stderr END ====
[2026-05-10 00:21:59]  *** Error codes and diagnostics ***
[2026-05-10 00:21:59]     "exeErrorCode": 0,
[2026-05-10 00:21:59]     "pilotErrorCode": 0,
[2026-05-10 00:21:59]  *** Listing of results directory ***
[2026-05-10 00:21:59] total 617020
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc    683926 May  8 23:17 pilot3.tar.gz
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc      5631 May  9 00:09 queuedata.json
[2026-05-10 00:21:59] -rwx------. 1 boinc boinc     36281 May  9 00:09 runpilot2-wrapper.sh
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc       100 May  9 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-10 00:21:59] -rwxr-xr-x. 1 boinc boinc      7986 May  9 21:23 run_atlas
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc       105 May  9 21:23 job.xml
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc      6482 May  9 21:23 init_data.xml
[2026-05-10 00:21:59] -rw-r--r--. 2 boinc boinc 439006854 May  9 21:23 EVNT.46701437._000349.pool.root.1
[2026-05-10 00:21:59] -rw-r--r--. 2 boinc boinc    697408 May  9 21:23 input.tar.gz
[2026-05-10 00:21:59] -rw-r--r--. 2 boinc boinc     15667 May  9 21:23 start_atlas.sh
[2026-05-10 00:21:59] drwxrwx--x. 2 boinc boinc      4096 May  9 21:23 shared
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc         0 May  9 21:23 boinc_lockfile
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc      2542 May  9 21:23 pandaJob.out
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc    995477 May  9 21:23 agis_schedconf.cvmfs.json
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc   1502997 May  9 21:23 agis_ddmendpoints.agis.ALL.json
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc       451 May  9 21:23 workernode_map.json
[2026-05-10 00:21:59] drwx------. 5 boinc boinc      4096 May  9 21:23 pilot3
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc 186051965 May 10 00:20 HITS.50087071._033442.pool.root.1
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc       486 May 10 00:20 boinc_task_state.xml
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc      1032 May 10 00:21 memory_monitor_summary.json
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc    309952 May 10 00:21 log.50087071._033442.job.log.tgz.1
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc      6432 May 10 00:21 heartbeat_new.json
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc      6323 May 10 00:21 heartbeat.json
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc      8192 May 10 00:21 boinc_mmap_file
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc        95 May 10 00:21 pilot_heartbeat.json
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc        27 May 10 00:21 wrapper_checkpoint.txt
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc      4904 May 10 00:21 pilotlog.txt
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc   1011078 May 10 00:21 log.50087071._033442.job.log.1
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc       357 May 10 00:21 output.list
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc       410 May 10 00:21 runtime_log
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc   1341440 May 10 00:21 result.tar.gz
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc      8828 May 10 00:21 runtime_log.err
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc       666 May 10 00:21 5f2b9abc55dd.diag
[2026-05-10 00:21:59] -rw-r--r--. 1 boinc boinc     20810 May 10 00:21 stderr.txt
[2026-05-10 00:21:59] HITS file was successfully produced:
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc 186051965 May 10 00:20 shared/HITS.pool.root.1
[2026-05-10 00:21:59]  *** Contents of shared directory: ***
[2026-05-10 00:21:59] total 612432
[2026-05-10 00:21:59] -rw-r--r--. 2 boinc boinc 439006854 May  9 21:23 ATLAS.root_0
[2026-05-10 00:21:59] -rw-r--r--. 2 boinc boinc    697408 May  9 21:23 input.tar.gz
[2026-05-10 00:21:59] -rw-r--r--. 2 boinc boinc     15667 May  9 21:23 start_atlas.sh
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc 186051965 May 10 00:20 HITS.pool.root.1
[2026-05-10 00:21:59] -rw-------. 1 boinc boinc   1341440 May 10 00:21 result.tar.gz
00:22:01 (2520932): run_atlas exited; CPU time 41043.391200
00:22:01 (2520932): called boinc_finish(0)

</stderr_txt>
]]>

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